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Not all publications have extents, not all extents are completely accurate
Assessing the risks posed by SARS-CoV-2 in and via North American bats — Decision framing and rapid risk assessment
Michael C. Runge, Evan H. Campbell Grant, Jeremy T. H. Coleman, Jonathan D. Reichard, Samantha E.J. Gibbs, Paul M. Cryan, Kevin J. Olival, Daniel P. Walsh, David S. Blehert, M. Camille Hopkins, Jonathan M. Sleeman
2020, Open-File Report 2020-1060
The novel β-coronavirus, SARS-CoV-2, may pose a threat to North American bat populations if bats are exposed to the virus through interaction with humans, if the virus can subsequently infect bats and be transmitted among them, and if the virus causes morbidity or mortality in bats. Further, if SARS-CoV-2 became...
Panmixia in a sea ice-associated marine mammal: evaluating genetic structure of the Pacific walrus (Odobenus rosmarus divergens) at multiple spatial scales
William S. Beatty, Patrick R. Lemons, Suresh Sethi, Jason Everett, Cara J. Lewis, Robert J. Lynn, Geoffrey M. Cook, Joel L. Garlich-Miller, John K. Wenburg
2020, Journal of Mammalogy (101) 755-765
The kin structure of a species at relatively fine spatial scales impacts broad-scale patterns in genetic structure at the population level. However, kin structure rarely has been elucidated for migratory marine mammals. The Pacific walrus (Odobenus rosmarus divergens) exhibits migratory behavior linked to seasonal patterns in sea ice dynamics. Consequently,...
3-D joint geodetic and strong-motion finite fault inversion of the 2008 May 12, Wenchuan, China Earthquake
Leonardo Ramirez-Guzman, Stephen H. Hartzell
2020, Geophysical Journal International (222) 1390-1404
We present a source inversion of the 2008 Wenchuan, China earthquake, using strong-motion waveforms and geodetic offsets together with three-dimensional synthetic ground motions. We applied the linear multiple time window technique considering geodetic and dynamic Green's functions computed with the finite element method and the reciprocity and Strain Green’s Tensor...
Dye-tracing plan for verifying the Kansas River time-of-travel model
Chantelle Davis, Bradley S. Lukasz, Madison R. May
2020, Open-File Report 2020-1039
The Kansas River provides drinking water for multiple cities in northeastern Kansas and is used for recreational purposes. Thus, improving the scientific knowledge of streamflow velocities and traveltimes will greatly aid in water-treatment plans and response to critical events and threats to water supplies. Dye-tracer studies are usually done to...
The 1951 eruption of Mount Lamington, Papua New Guinea: Devastating directed blast triggered by small-scale edifice failure
Alexander Belousov, Marina Belousova, Richard P. Hoblitt, Herman Patia
2020, Journal of Volcanology and Geothermal Research (401)
The catastrophic explosion of Mount Lamington volcano, Papua New Guinea on January 21, 1951 produced a devastating pyroclastic density current (PDC) that knocked down dense tropical rainforest over an area of 230 km2 and killed approximately 3000 people. We present results of a field reinvestigation of the 1951 PDC deposit combined...
Validating climate‐change refugia: Empirical bottom‐up approaches to support management actions
Cameron W. Barrows, Aaron R. Ramirez, Lynn C. Sweet, Toni Lyn Morelli, Constance I. Millar, Neil Frakes, Jane Rodgers, Mary Frances Mahalovich
2020, Frontiers in Ecology and the Environment (18) 298-306
Efforts to conserve biodiversity increasingly focus on identifying climate‐change refugia – areas relatively buffered from contemporary climate change over time that enable species persistence. Identification of refugia typically includes modeling the distribution of a species’ current habitat and then extrapolating that distribution given projected changes in temperature and precipitation, or...
Modeling geologic sequestration of carbon dioxide in a deep saline carbonate reservoir with TOUGH2–ChemPlugin, a new tool for reactive transport modeling
Tina L. Roberts-Ashby, Peter M. Berger, Jeffrey A. Cunningham, Ram Kumar, Madalyn S. Blondes
2020, Environmental Geosciences (27) 103-116
This paper outlines the development and demonstration of a new tool, TOUGH2–ChemPlugin (T2CPI) for predicting rock–water–CO2 interaction following injection of supercritical CO2 into a heterogeneous carbonate system. Specifically, modeling capabilities of TOUGH2, which examines multiphase flow and supercritical CO2 behavior, were combined with the geochemical modeling capabilities of The Geochemist’s Workbench® (GWB), using ChemPluginTM....
Climate‐change refugia: Biodiversity in the slow lane
Toni Lyn Morelli, Cameron W. Barrows, Aaron R. Ramirez, Jennifer M. Cartwright, David D. Ackerly, Tatiana D. Eaves, Joseph L. Ebersole, Meg A. Krawchuk, Benjamin Letcher, Mary Frances Mahalovich, Garrett Meigs, Julia Michalak, Constance I. Millar, Rebecca M. Quinones, Diana Stralberg, James H. Thorne
2020, Frontiers in Ecology and the Environment (18) 228-234
Climate‐change adaptation focuses on conducting and translating research to minimize the dire impacts of anthropogenic climate change, including threats to biodiversity and human welfare. One adaptation strategy is to focus conservation on climate‐change refugia (that is, areas relatively buffered from contemporary climate change over time that enable persistence of valued...
Locality note for rubber boa
Joseph A. Tomoleoni, Richard F Hoyer
2020, Herpetological Review (51)
CHARINA BOTTAE BOTTAE (N. Rubber Boa), USA: CALIFORNIA: Monterey Co.: Landels-Hill Big Creek Reserve, east side of Hwy. 1, 80 km (50 miles) south of Carmel, Calif., (36.0719055 N 121.5991555 W) 19 June, 2009; (36.0703611 N 121.5982222 W) 06 July 2009; (36.9516666 N 121.5991944 W) 27...
Validation of laboratory tests for infectious diseases in wild mammals: Review and recommendations
Jia Beibei, David Colling, David E. Stallknecht, David S. Blehert, John Bingham, Beate Crossley, Debbie Eagles, Ian A Gardner
2020, Journal of Veterinary Diagnostic Investigation (32) 776-792
Evaluation of the diagnostic sensitivity (DSe) and specificity (DSp) of tests for infectious diseases in wild animals is challenging, and some of the limitations may affect compliance with the OIE-recommended test validation pathway. We conducted a methodologic review of test validation studies for OIE-listed diseases in wild mammals published between...
An empirical comparison of population genetic analyses using microsatellite and SNP data for a species of conservation concern
Shawna J Zimmerman, Cameron L. Aldridge, Sara J. Oyler-McCance
2020, BMC Genomics (21)
BackgroundUse of genomic tools to characterize wildlife populations has increased in recent years. In the past, genetic characterization has been accomplished with more traditional genetic tools (e.g., microsatellites). The explosion of genomic methods and the subsequent creation of large SNP datasets has led to the promise of increased...
Laboratory trials to evaluate carbon dioxide as a potential behavioral control method for invasive red swamp (Procambarus clarkii) and rusty crayfish (Faxonius rusticus)
Kim T. Fredricks, John A. Tix, Justin Smerud, Aaron R. Cupp
2020, Biological Invasions (11) 259-278
Few effective strategies are available to control invasive crayfishes. Carbon dioxide (CO2) acts as a behavioral deterrent for invasive fishes and could be a useful crayfish control tool. The objective of this laboratory study was to quantify CO2 concentrations that caused red swamp crayfish (RSC; Procambarus clarkii) and rusty crayfish...
Application of the Precipitation-Runoff Modeling System (PRMS) to simulate near-native streamflow in the Upper Rio Grande Basin
Shaleene B. Chavarria, C. David Moeser, Kyle R. Douglas-Mankin
2020, Scientific Investigations Report 2020-5026
The U.S. Geological Survey’s Precipitation-Runoff Modeling System (PRMS) is widely used to simulate the effects of climate, topography, land cover, and soils on landscape-level hydrologic response and streamflow. This study developed, calibrated, and assessed a PRMS model that simulates near-native or naturalized streamflow conditions in the Upper Rio Grande Basin....
The effects of management practices on grassland birds—Chestnut-collared Longspur (Calcarius ornatus)
Jill A. Shaffer, Lawrence D. Igl, Douglas H. Johnson, Marriah L. Sondreal, Christopher M. Goldade, Melvin P. Nenneman, Travis L. Wooten, Betty R. Euliss
2020, Professional Paper 1842-X
Keys to Chestnut-collared Longspur (Calcarius ornatus) management are providing and maintaining native pastures with fairly short overall vegetation and sparse litter accumulation but with areas of taller and denser vegetation and accumulated litter for nesting, and tailoring grazing intensity to local conditions. Chestnut-collared Longspurs have been reported to use habitats...
Expert-informed habitat suitability analysis for at-risk species assessment and conservation planning
Brian A. Crawford, John C. Maerz, Clinton T. Moore
2020, Journal of Fish and Wildlife Management (11) 130-150
The U.S. Fish and Wildlife Service (USFWS) is responsible for reviewing the biological status of hundreds of species to determine federal status designations under the Endangered Species Act. The longleaf pine Pinus palustris ecological system supports many priority at-risk species designated for review, including five species of herpetofauna: gopher tortoise Gopherus polyphemus, southern...
Data release of reprocessed select National Uranium Resources Evaluation program samples in Wyoming
David W. Lucke, Steven M. Smith, Jaime S. Azain, Andrew David Ingraham
2020, Open-File Report 2020-7
The U.S. Atomic Energy Commission established the National Uranium Resources Evaluation (NURE) program in 1973 to identify uranium resources throughout the United States. Part of this program focused on the collection of stream-sediment samples and subsequent geochemical analyses of these samples for uranium, in addition to 47 other elements. As...
Climate change projected to reduce prescribed burning opportunities in the south-eastern United States
John A Kupfer, Adam J. Terando, Peng Gao, Casey Teske, J Kevin Hiers
2020, International Journal of Wildland Fire (29) 764-778
Prescribed burning is a critical tool for managing wildfire risks and meeting ecological objectives, but its safe and effective application requires that specific meteorological criteria (a ‘burn window’) are met. Here, we evaluate the potential impacts of projected climatic change on prescribed burning in the south-eastern United States by applying...
Oases of the future? Evaluating springs as potential hydrologic refugia in drying climates
Jennifer M. Cartwright, Kathleen A. Dwire, Zach Freed, Samantha J. Hammer, Blair McLaughlin, Louise W. Misztal, Edward J. Schenk, John R. Spencer, Abraham E. Springer, Lawrence E. Stevens
2020, Frontiers in Ecology and the Environment (18) 245-253
Springs in water-limited landscapes are biodiversity hotspots and keystone ecosystems, disproportionately influencing surrounding landscapes despite their often small areas. Some springs served as evolutionary refugia during previous climate drying, supporting relict species in isolated habitats. Understanding whether springs will provide hydrologic refugia from future climate change is important to biodiversity...
Gear comparison study for sampling nekton in Barataria Basin marshes
Caleb Taylor, Megan K. La Peyre, Shaye Sable, Erin P. Kiskaddon, Melissa M. Baustian
2020, Report
This project was funded by the Louisiana Trustee Implementation Group (LA TIG) to support decisions related to investments in long-term monitoring. The LA TIG seeks to ensure long-term monitoring informs coastal restoration activities with the goal of sustaining and improving fisheries impacted by the Deepwater Horizon (DWH) Oil Spill. The...
Combining physical and species‐based approaches improves refugia identification
Julia Michalak, Diana Stralberg, Jennifer M. Cartwright, Joshua J. Lawler
2020, Frontiers in Ecology and the Environment (18) 254-260
Climate‐change refugia – locations likely to facilitate species persistence under climate change – are increasingly important components of conservation planning. Recent approaches for identifying refugia at broad scales include identifying regions that are projected to experience less severe changes (climatic exposure), that contain a diversity of physical and topographic features...
Disturbance refugia within mosaics of forest fire, drought, and insect outbreaks
Meg A. Krawchuk, Garrett Meigs, Jennifer M. Cartwright, Jonathan D. Coop, Raymond J. Davis, Andres Holz, Crystal A. Kolden, Arjan J.H. Meddens
2020, Frontiers in Ecology and the Environment (18) 235-244
Disturbance refugia – locations that experience less severe or frequent disturbances than the surrounding landscape – provide a framework to highlight not only where and why these biological legacies persist as adjacent areas change but also the value of those legacies in sustaining biodiversity. Recent studies of disturbance refugia in...
Annual outbreaks of coral disease coincide with extreme seasonal warming
Emily Howells, Grace Vaughan, Thierry M. Work, John Burt, David Abrego
2020, Coral Reefs (39) 771-781
Reef-building corals living in extreme environments can provide insight into the negative effects of future climate scenarios. In hot environments, coral communities experience disproportionate thermal stress as they live very near or at their upper thermal limits. This results in a high frequency of bleaching episodes, but it is unknown...
Real-time performance of the PLUM earthquake early warning method during the 2019 M6.4 and M7.1 Ridgecrest, California, Earthquakes
Sarah E. Minson, Jessie Kate Saunders, Julian Bunn, Elizabeth S. Cochran, Annemarie S. Baltay Sundstrom, Deborah L. Kilb, Mitsuyuki Hoshiba, Yuki Kodera
2020, Bulletin of the Seismological Society of America (110) 1887-1903
We evaluate the timeliness and accuracy of ground‐motion‐based earthquake early warning (EEW) during the July 2019 M6.4 and 7.1 Ridgecrest earthquakes. In 2018, we began retrospective and internal real‐time testing of the propagation of local undamped motion (PLUM) method for earthquake warning in California, Oregon, and Washington, with the potential...
Impacts of hydrothermal plume processes on oceanic metal cycles and transport
Amy Gartman, Alyssa J. Findlay
2020, Nature Geoscience (13) 396-402
Chemical, physical and biological processes in hydrothermal plumes control the flux of elements from hydrothermal vents to the global oceans. The timescales of these processes range from less than a second, as the hydrothermal fluid mixes with seawater at the seafloor, to decades, as the plume disperses over thousands of...
Major-oxide and trace-element geochemical data from rocks collected on Little Sitkin Island, from Little Sitkin Volcano, Alaska
Jessica Larsen, Christina A. Neal, Cheryl E. Cameron
2020, Raw Data File 2020-4
During the 2005 summer field season, geologists Michelle Coombs, Christina Neal, and Jessica Larsen from the University of Alaska, Fairbanks and the U.S. Geological survey, Alaska Volcano Observatory (AVO) conducted fieldwork on Little Sitkin Island in the western Aleutians of Alaska. The primary purpose of the fieldwork was to install...