A new parameterization for estimating co‐occurrence of interacting species
J. Hardin Waddle, Robert M. Dorazio, Susan C. Walls, Kenneth G. Rice, Jeff Beauchamp, Melinda J. Schuman, Frank J. Mazzotti
2010, Ecological Applications (20) 1467-1475
Models currently used to estimate patterns of species co‐occurrence while accounting for errors in detection of species can be difficult to fit when the effects of covariates on species occurrence probabilities are included. The source of the estimation problems is the particular parameterization used to specify species co‐occurrence probability. We...
Reply to “Comment on ‘Near-surface location, geometry, and velocities of the Santa Monica fault zone, Los Angeles, California’ by R. D. Catchings, G. Gandhok, M. R. Goldman, D. Okaya, M. J. Rymer, and G. W. Bawden” by T. L. Pratt and J. F. Dolan
Rufus D. Catchings, Michael J. Rymer, Mark R. Goldman, Gerald W. Bawden
2010, Bulletin of the Seismological Society of America (100) 2338-2347
In a comment on our 2008 paper (Catchings, Gandhok, et al., 2008) on the Santa Monica fault in Los Angeles, California, Pratt and Dolan (2010) (herein referred to as P&D) cite numerous objections to our work, inferring that our study is flawed. However, as shown in our reply, their objections...
Mount Rainier National Park and Olympic National Park Elk Monitoring Program Annual Report 2010
Paul Griffin, Patricia J. Happe, Kurt J. Jenkins, Mason Reid, David J. Vales, Barbara J. Moeller, Michelle Tirhi, Scott McCorquodale, Pat Miller
2010, Natural Resource Data Series 2011/289
Fiscal year 2010 was the third year of gathering data needed for protocol development while simultaneously implementing what is expected to be the elk monitoring protocol at Mount Rainier (MORA) and Olympic (OLYM) national parks in the North Coast and Cascades Network (NCCN). Elk monitoring in these large wilderness parks...
Development of inferential sensors for real-time quality control of water-level data for the Everglades Depth Estimation Network
Ruby C. Daamen, Jr. Edwin A. Roehl, Paul Conrads
2010, Conference Paper
The Everglades Depth Estimation Network (EDEN) is an integrated network of real-time water-level gaging stations, ground-elevation models, and watersurface models designed to provide scientists, engineers, and water-resource managers with current (2000-present) water-depth information for the entire freshwater portion of the greater Everglades. The generation of EDEN waterlevel surfaces is derived...
The use of genetics for the management of a recovering population: temporal assessment of migratory peregrine falcons in North America
Jeff A. Johnson, Sandra L. Talbot, George K. Sage, Kurt K. Burnham, Joseph W. Brown, Tom L. Maechtle, William S. Seegar, Michael A. Yates, Bud Anderson, David P. Mindell
2010, PLoS ONE (5)
Background:Our ability to monitor populations or species that were once threatened or endangered and in the process of recovery is enhanced by using genetic methods to assess overall population stability and size over time. This can be accomplished most directly by obtaining genetic measures from temporally-spaced samples that reflect...
Overview of selected surrogate technologies for high-temporal resolution suspended-sediment monitoring
John R. Gray, Jeffrey W. Gartner
2010, Conference Paper, Proceedings of the Joint Federal Interagency Conference 2010: Hydrology and Sedimentation for a Changing Future: Existing and Emerging Issues: Las Vegas, NV, June 27-July 1, 2010
Traditional methods for characterizing selected properties of suspended sediments in rivers are being augmented and in some cases replaced by cost-effective surrogate instruments and methods that produce a temporally dense time series of quantifiably accurate data for use primarily in sediment-flux computations. Turbidity is the most common such surrogate...
Development of a national, dynamic reservoir-sedimentation database
J. R. Gray, J.M. Bernard, D. W. Stewart, E.J. McFaul, K.W. Laurent, G. E. Schwarz, J.T. Stinson, M.M. Jonas, T. J. Randle, J.W. Webb
2010, Conference Paper, Proceedings of the Joint Federal Interagency Conference 2010: Hydrology and Sedimentation for a Changing Future: Existing and Emerging Issues: Las Vegas, NV, June 27-July 1, 2010
The importance of dependable, long-term water supplies, coupled with the need to quantify rates of capacity loss of the Nation’s re servoirs due to sediment deposition, were the most compelling reasons for developing the REServoir- SEDimentation survey information (RESSED) database and website. Created under the auspices of the Advisory Committee...
Computing time-series suspended-sediment concentrations and loads from in-stream turbidity-sensor and streamflow data
Patrick P. Rasmussen, John R. Gray, G. Doug Glysson, Andrew C. Ziegler
2010, Conference Paper, Proceedings of the Joint Federal Interagency Conference 2010: Hydrology and Sedimentation for a Changing Future: Existing and Emerging Issues: Las Vegas, NV, June 27-July 1, 2010
Over the last decade, use of a method for computing suspended-sediment concentration and loads using turbidity sensors—primarily nephelometry, but also optical backscatter—has proliferated. Because an in- itu turbidity sensor is capa le of measuring turbidity instantaneously, a turbidity time series can be recorded and related directly to time-varying suspended-sediment concentrations....
Landscape indicators and land cover change in the Mid-Atlantic Region of the United States, 1973-2001
E. Terrence Slonecker, Lesley Milheim, Peter R. Claggett
2010, GIScience and Remote Sensing (47) 163-186
Landscape indicators, derived from land use and land cover data as well as other data, were used to calculate the ecological consequences of land cover change in terms of nitrate loading and physical bird habitat. Both were modeled from 1973, 1992, and 2001 land cover data...
Creation of next generation U.S. Geological Survey topographic maps
Kari J. Craun
2010, Book
The U.S. Geological Survey (USGS) is 2 years into a 3-year cycle to create new digital topographic map products for the conterminous United States from data acquired and maintained as part of The National Map databases. These products are in the traditional, USGS topographic quadrangle, 7.5-minute (latitude and longitude) cell...
Making lidar more photogenic: creating band combinations from lidar information
Jason M. Stoker
2010, Photogrammetric Engineering and Remote Sensing (76) 216-220
Over the past five to ten years the use and applicability of light detection and ranging (lidar) technology has increased dramatically. As a result, an almost exponential amount of lidar data is being collected across the country for a wide range of applications, and it is currently the technology of...
A procedure for radiometric recalibration of Landsat 5 TM reflective-band data
G. Chander, M.O. Haque, E. Micijevic, J. A. Barsi
2010, IEEE Transactions on Geoscience and Remote Sensing (48) 556-574
From the Landsat program's inception in 1972 to the present, the Earth science user community has been benefiting from a historical record of remotely sensed data. The multispectral data from the Landsat 5 (L5) Thematic Mapper (TM) sensor provide the backbone for this extensive archive. Historically, the radiometric calibration procedure...
Improving inferences from fisheries capture-recapture studies through remote detection of PIT tags
David A. Hewitt, Eric C. Janney, Brian S. Hayes, Rip S. Shively
2010, Fisheries (35) 217-231
Models for capture-recapture data are commonly used in analyses of the dynamics of fish and wildlife populations, especially for estimating vital parameters such as survival. Capture-recapture methods provide more reliable inferences than other methods commonly used in fisheries studies. However, for rare or elusive fish species, parameter estimation is often...
Correction for the 17O interference in δ(13C) measurements when analyzing CO2 with stable isotope mass spectrometry
Willi A. Brand, Sergey S. Assonov, Tyler B. Coplen
2010, Pure and Applied Chemistry (82) 1719-1733
Measurements of δ(13C) determined on CO2 with an isotope-ratio mass spectrometer (IRMS) must be corrected for the amount of 17O in the CO2. For data consistency, this must be done using identical methods by different laboratories. This report aims at unifying data treatment for CO2 IRMS by proposing (i) a...
An overview of sensor calibration inter-comparison and applications
Xiaoxiong Xiong, Changyong Cao, Gyanesh Chander
2010, Frontiers of Earth Science in China (4) 237-252
Long-term climate data records (CDR) are often constructed using observations made by multiple Earth observing sensors over a broad range of spectra and a large scale in both time and space. These sensors can be of the same or different types operated on the same or different platforms. They can...
Relationship and variation of qPCR and culturable enterococci estimates in ambient surface waters are predictable
Richard L. Whitman, Zhongfu Ge, Meredith B. Nevers, Alexandria B. Boehm, Eunice C. Chern, Richard A. Haugland, Ashley M. Lukasik, Marirosa Molina, Kasia Przybyla-Kelly, Dawn A. Shively, Emily M. White, Richard G. Zepp, Muruleedhara N. Byappanahalli
2010, Environmental Science & Technology (44) 5049-5054
The quantitative polymerase chain reaction (qPCR) method provides rapid estimates of fecal indicator bacteria densities that have been indicated to be useful in the assessment of water quality. Primarily because this method provides faster results than standard culture-based methods, the U.S. Environmental Protection Agency is currently considering its use as...
Current challenges using models to forecast seawater intrusion: lessons from the Eastern Shore of Virginia, USA
Ward E. Sanford, Jason P. Pope
2010, Hydrogeology Journal (18) 73-93
A three-dimensional model of the aquifer system of the Eastern Shore of Virginia, USA was calibrated to reproduce historical water levels and forecast the potential for saltwater intrusion. Future scenarios were simulated with two pumping schemes to predict potential areas of saltwater intrusion. Simulations suggest that only a few wells...
Prevalence of antibodies to type A influenza virus in wild avian species using two serologic assays
Justin D. Brown, M. Page Luttrell, Roy D. Berghaus, Whitney Kistler, Shamus P. Keeler, Andrea Howey, Benjamin Wilcox, Jeffrey S. Hall, Larry Niles, Amanda Dey, Gregory Knutsen, Kristen Fritz, David E. Stallknecht
2010, Journal of Wildlife Diseases (46) 896-911
Serologic testing to detect antibodies to avian influenza (AI) virus has been an underused tool for the study of these viruses in wild bird populations, which traditionally has relied on virus isolation and reverse transcriptase-polymerase chain reaction (RT-PCR). In a preliminary study, a recently developed commercial blocking enzyme-linked immunosorbent assay...
Effect of clay content and mineralogy on frictional sliding behavior of simulated gouges: binary and ternary mixtures of quartz, illite, and montmorillonite
Sheryl Tembe, David A. Lockner, Teng-Fong Wong
2010, Journal of Geophysical Research B: Solid Earth (115)
We investigated the frictional sliding behavior of simulated quartz-clay gouges under stress conditions relevant to seismogenic depths. Conventional triaxial compression tests were conducted at 40 MPa effective normal stress on saturated saw cut samples containing binary and ternary mixtures of quartz, montmorillonite, and illite. In all cases, frictional strengths of...
Water-resources data for the United States: water year 2010
Water Resources Division, U.S. Geological Survey
2010, Water Data Report 2010
Water resources data are published annually for use by engineers, scientists, managers, educators, and the general public. These archival products supplement direct access to current and historical water data provided by NWISWeb. Beginning with Water Year 2006, annual water data reports are available as individual electronic Site Data Sheets for...
Model-based evaluation of highly and low pathogenic avian influenza dynamics in wild birds
Viviane Hénaux, Michael D. Samuel, Christine M. Bunck
2010, PLoS ONE (5)
There is growing interest in avian influenza (AI) epidemiology to predict disease risk in wild and domestic birds, and prevent transmission to humans. However, understanding the epidemic dynamics of highly pathogenic (HPAI) viruses remains challenging because they have rarely been detected in wild birds. We used modeling to integrate available...
Longitudinal structure in temperate stream fish communities: evaluating conceptual models with temporal data
James H. Roberts, Nathaniel P. Hitt
2010, Conference Paper, Community ecology of stream fishes : concepts, approaches, and techniques; American Fisheries Symposium 73
Five conceptual models of longitudinal fish community organization in streams were examined: (1) niche diversity model (NDM), (2) stream continuum model (SCM), (3) immigrant accessibility model (IAM), (4) environmental stability model (ESM), and (5) adventitious stream model (ASM). We used differences among models in their predictions about temporal species turnover,...
Low-altitude aerial color digital photographic survey of the San Andreas Fault
David K. Lynch, Kenneth W. Hudnut, David S.P. Dearborn
2010, Seismological Research Letters (81) 453-459
Ever since 1858, when Gaspard-Félix Tournachon (pen name Félix Nadar) took the first aerial photograph (Professional Aerial Photographers Association 2009), the scientific value and popular appeal of such pictures have been widely recognized. Indeed, Nadar patented the idea of using aerial photographs in mapmaking and surveying. Since then, aerial imagery...
Diel behavior of rearing fall Chinook salmon
Kenneth F. Tiffan, Tobias J. Kock, Joseph J. Skalicky
2010, Northwestern Naturalist (91) 342-345
In fisheries science, habitat use is often inferred when fish are sampled or observed in a particular location. Physical habitat is typically measured where fish are found, and thus deemed important to habitat use. Although less common, a more informative approach is to measure or observe fish behavior within given...
Aviation response to a widely dispersed volcanic ash and gas cloud from the August 2008 eruption of Kasatochi, Alaska, USA
Marianne Guffanti, David J. Schneider, Kristi L. Wallace, Tony Hall, Dov R. Bensimon, Leonard J. Salinas
2010, Journal of Geophysical Research D: Atmospheres (115)
The extensive volcanic cloud from Kasatochi's 2008 eruption caused widespread disruptions to aviation operations along Pacific oceanic, Canadian, and U.S. air routes. Based on aviation hazard warnings issued by the National Oceanic and Atmospheric Administration, U.S. Geological Survey, the Federal Aviation Administration, and Meteorological Service of Canada, air carriers largely...
