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Not all publications have extents, not all extents are completely accurate
Study 11. Effects of Nanophyetus on the swimming performance and survival of steelhead smolts AND studies to understand and manage the Nanophyetus cercaria
Paul Hershberger
2018, Report, Puget Sound Steelhead Marine Survival: 2013-2017 research findings summary
Recent field surveillances indicated that outmigrating steelhead smolts in several south Puget Sound watersheds are infected with the digenean trematode Nanophyetus salmonicola at high prevalence and intensity (Chen et al Accepted). The apparent severity of these infections, especially in the Nisqually and Green / Duwamish Rivers, lead to the hypothesis...
Introduction and dispersal of non-native bullseye snakehead Channa marulius (Hamilton, 1822) in the canal system of southeastern Florida, USA
Amy J. Benson, Pamela J. Schofield, Kelly B. Gestring
2018, BioInvasions Records (7) 451-457
An established population of bullseye snakehead (Channa marulius), a large predatory fish from southeastern Asia, was identified for the first time in North America from waters in southeastern Florida, USA, in the year 2000. Since then, it has dispersed throughout the extensive canal system in the area from West Palm...
The North American carbon budget: Past, present, and future
A. David McGuire, Daniel J. Hayes, Rodrigo Vargas, Simone R. Alin, Richard T. Conant, Lucy R. Hutrya, Andrew R. Jacobson, Werner A. kurz, Benjamine Poulter, Christopher W. Woodall, Shuguang Liu
2018, Book chapter, Review of the Draft Second State of the Carbon Cycle Report (SOCCR2)
This chapter nicely summarizes and synthesizes the latest scientific information on the North American carbon budget by incorporating terrestrial, anthropogenic, aquatic, and coastal margin CO2 and CH4dynamics. Starting with a historical context, the chapter summarizes current understanding of the magnitudes and trends of carbon stocks and fluxes at the continental...
Terrestrial wetlands
Randall Kolka, Carl Trettin, Wenwu Tang, Ken W. Krauss, Sheel Bansal, Judith Z. Drexler, Kimberly P. Wickland, Rodney A. Chimner, Dianna M. Hogan, Emily Pindilli, Brian Benscoter, Brian Tangen, Evan S. Kane, Scott D. Bridgham, Curtis J. Richardson
2018, Report, Second State of the Carbon Cycle Report (SOCCR2): A Sustained Assessment Report
1. The assessment of terrestrial wetland carbon stocks has improved greatly since the First State of the Carbon Cycle Report (CCSP 2007) because of recent national inventories and the development of a U.S. soils database. Terrestrial wetlands in North America encompass an estimated 2.2 million km2, which constitutes about 37%...
Coupling high-frequency stream metabolism and nutrient monitoring to explore biogeochemical controls on downstream nitrate delivery
Helen P. Jarvie, Andrew N. Sharpley, Timothy M. Kresse, Phillip D. Hays, Richard J. Williams, Stephen M. King, Lawrence G. Berry
2018, Environmental Science & Technology (52) 13708-13717
Instream biogeochemical process measurements are often short-term and localized. Here we use in situ sensors to quantify the net effects of biogeochemical processes on seasonal patterns in baseflow nitrate retention at the river-reach scale. Dual-station high-frequency in situ nitrate measurements, were coupled with high-frequency measurements of stream metabolism and dissolved...
Regenerating clearcuts combined with postharvest forestry treatments promote habitat for breeding and post-breeding spruce-fir avian assemblages in the Atlantic Northern Forest
Brian W. Rolek, Daniel J. Harrison, Cynthia S. Loftin, Petra B. Wood
2018, Forest Ecology and Management (427) 392-413
The quantity of spruce-fir forest and some conifer-associated breeding bird abundances in the Atlantic Northern Forest have declined in recent decades emphasizing the need to better understand avian responses to forest management and to identify options that proactively conserve habitat for birds during the breeding and post-breeding period. We conducted...
A 3,000‐year lag between the geological and ecological shutdown of Florida's coral reefs
Lauren Toth, Ilsa B. Kuffner, Anastasios Stathakopoulos, Eugene A. Shinn
2018, Global Change Biology (24) 5471-5483
The global‐scale degradation of coral reefs has reached a critical threshold wherein further declines threaten both ecological functionality and the persistence of reef structure. Geological records can provide valuable insights into the long‐term controls on reef development that may be key to solving the modern coral‐reef crisis. Our analyses of...
Age and growth of a native, lightly exploited population of Coregonus clupeaformis (Lake Whitefish) in a small natural lake in Maine
Daniel M. Weaver, Silas K. Ratten, Stephen M. Coghlan, Graham D. Sherwood, Joseph D. Zydlewski
2018, Northeastern Naturalist (25) 599-610
We assessed annual growth of Coregonus clupeaformis (Lake Whitefish) from a natural, lightly exploited population in a small lake in northern Maine using observed and back-calculated length-at-age data. We sampled Lake Whitefish from Clear Lake, ME, with gill nets and extracted otoliths from 57 fish. We incorporated age-at-length data into...
Validation of the CHIRPS satellite rainfall estimates over eastern Africa
Tufa Dinku, Chris Funk, Pete Peterson, Ross Maidment, Tsegaye Tadesse, Pietro Ceccato
2018, Quarterly Journal of the Royal Meteorological Society (144) 292-312
Long and temporally consistent rainfall time series are essential in climate analyses and applications. Rainfall data from station observations are inadequate over many parts of the world due to sparse or non-existent observation networks, or limited reporting of gauge observations. As a result, satellite rainfall estimates have been used as...
Gaps in kelp cover may threaten the recovery of California sea otters
Teri E. Nicholson, Karl A. Mayer, Michelle M. Staedler, Jessica A. Fujii, Michael J. Murray, Andrew B. Johnson, M. Tim Tinker, Kyle S. Van Houtan
2018, Ecography (41) 1751-1762
Despite more than a century of federal protection, the California sea otter Enhydra lutris nereis remains threatened under the U.S. Endangered Species Act (ESA), and the population has not appreciably expanded its range in two decades. Here, we examine a novel dataset of 725 sea otter live strandings from 1984–2015 to gain...
Magmatic origin for sediment-hosted Au deposits, Guizhou Province, China: In situ chemistry and sulfur isotope composition of pyrites, Shuiyindong and Jinfeng deposits
Zhuojun Xie, Yong Xia, Jean Cline, Michael Pribil, Alan Koenig, Qingping Tan, Dongtian Wei, Zepeng Wang, Jun Yan
2018, Economic Geology (7) 1627-1652
The southwest Guizhou Province, China, contains numerous sediment-hosted Au deposits with Au reserves greater than 700 tonnes. To date, the source of ore fluids that formed the Guizhou sediment-hosted Au deposits is controversial, hampering the formulation of genetic models. In this study, we selected the Shuiyindong and Jinfeng Au deposits,...
StreamStats for South Carolina: A multipurpose water-resources web application
Toby D. Feaster, Jimmy M. Clark, Katharine Kolb
2018, Fact Sheet 2018-3070
The U.S. Geological Survey (USGS) developed the South Carolina StreamStats application in cooperation with the South Carolina Department of Transportation. StreamStats (https://water.usgs.gov/osw/streamstats/) is a map-based web application that provides analytical tools useful for water-resources planning and management and many engineering purposes. The web application delineates drainage areas at...
Effect of sample holding time on bioaccessibility and sediment ecotoxicological assessments
Kara S Huff Hartz, Federico L. Sinche, Samuel A. Nutile, Courtney Y. Fung, Patrick W. Moran, Peter C. Van Metre, Lisa H. Nowell, Marc A. Mills, Michael J Lydy
2018, Environmental Pollution (242) 2078-2087
The ecotoxicological effects of hydrophobic organic compound (HOC) contamination in sediment are often assessed using laboratory exposures of cultured invertebrates to field-collected sediment. The use of a sediment holding time (storage at 4°C) between field sampling and the beginning of the bioassay is common practice, yet the effect of holding time on the...
Modeling morphodynamic development in the Alviso Slough system, South San Francisco Bay, California
Mick Van der Wegen, Johan Reyes, Bruce Jaffe, Amy Foxgrover
2018, Report
Alviso Slough area, South San Francisco Bay, California, is the site of an ongoing effort to restore former salt production ponds to intertidal habitat. As restoration proceeds and the levees surrounding the former salt production ponds are breached, the increase in tidal prism and associated sediment scour in the sloughs...
It matters when you measure it: Using snow-cover Normalised Difference Vegetation Index (NDVI) to isolate post-fire conifer regeneration
Melanie K. Vanderhoof, Todd Hawbaker
2018, International Journal of Wildland Fire (27) 815-830
Landsat Normalised Difference Vegetation Index (NDVI) is commonly used to monitor post-fire green-up; however, most studies do not distinguish new growth of conifer from deciduous or herbaceous species, despite potential consequences for local climate, carbon and wildlife. We found that dual season (growing and snow cover) NDVI...
Adapting management to a changing world: Warm temperatures, dry soil, and interannual variability limit restoration success of a dominant woody shrub in temperate drylands
Robert K. Shriver, Caitlin M. Andrews, David S. Pilliod, Robert Arkle, Justin L. Welty, Matthew J. Germino, Michael C. Duniway, David A. Pyke, John B. Bradford
2018, Global Change Biology (24) 4972-4982
Restoration and rehabilitation of native vegetation in dryland ecosystems, which encompass over 40% of terrestrial ecosystems, is a common challenge that continues to grow as wildfire and biological invasions transform dryland plant communities. The difficulty in part stems from low and variable precipitation, combined with limited understanding about how weather...
Tropical storm-induced landslide potential using combined field monitoring and numerical modeling
Pan Chen, Ning Lu, Giuseppe Formetta, Jonathan W. Godt, Alexandra Wayllace
2018, Journal of Geotechnical and Geoenvironmental Engineering (144) 1-12
When heavy rainfall, such as that associated with tropical storms, falls on steep hillsides, shallow landslides are often one of the damaging consequences. To assess landslide potential from heavy rainfall, a strategy of combined numerical simulation and field monitoring of variably saturated hillslope conditions is developed. To...
Challenges and opportunities developing mathematical models of shared pathogens of domestic and wild animals
Kathryn P. Huyvaert, Robin E. Russell, Kelly A. Patyk, Meggan E. Craft, Paul C. Cross, M. Graeme Garner, Michael K. Martin, Pauline Nol, Daniel P. Walsh
2018, Veterinary Sciences (5)
Diseases that affect both wild and domestic animals can be particularly difficult to prevent, predict, mitigate, and control. Such multi-host diseases can have devastating economic impacts on domestic animal producers and can present significant challenges to wildlife populations, particularly for populations of conservation concern. Few mathematical models exist that capture...
Climate dictates magnitude of asymmetry in soil depth and hillslope gradient
Assaf Inbar, Petter Nyman, Francis K. Rengers, Patrick N. J. Lane, Gary J. Sheridan
2018, Geophysical Research Letters (45) 6514-6522
Hillslope asymmetry is often attributed to differential eco‐hydro‐geomorphic processes resulting from aspect‐related differences in insolation. At midlatitudes, polar facing hillslopes are steeper, wetter, have denser vegetation, and deeper soils than their equatorial facing counterparts. We propose that at regional scales, the magnitude in insolation‐driven hillslope asymmetry is sensitive to variations...
Evaluating flow management as a strategy to recover an endangered sturgeon species in the Upper Missouri River, USA
Susannah O. Erwin, Edward A. Bulliner, Craig J Fischenich, Robert B. Jacobson, Patrick Braaten, Aaron J. Delonay
2018, River Research and Applications (34) 1254-1266
In the Upper Missouri River, Fort Peck and Garrison Dams limit the length of free‐flowing river available to the endangered pallid sturgeon. These barriers restrict the upstream migration of adults and downstream larval dispersal. A one‐dimensional (1D) modelling framework is currently in use to evaluate reservoir operation alternatives and to...
Geologic, hydrologic, and water-quality data from multiple-well monitoring sites in the Bunker Hill and Yucaipa Groundwater Subbasins, San Bernardino County, California, 1974–2016
Gregory O. Mendez, Robert Anders, Kelly R. McPherson, Wesley R. Danskin
2018, Data Series 1096
In 1974, the U.S. Geological Survey (USGS), in cooperation with the San Bernardino Valley Municipal Water District, initiated a study to assess the regional groundwater resources in the Bunker Hill Subbasin of the Upper Santa Ana Valley Groundwater Basin in San Bernardino County, California. The study area expanded east into...
Hidden cost of disease in a free‐ranging ungulate: brucellosis reduces mid‐winter pregnancy in elk
Gavin G. Cotterill, Paul C. Cross, Arthur D. Middleton, Jared D. Rogerson, Brandon Scurlock, Johan T. Du Toit
2018, Ecology and Evolution (8) 10733-10742
Demonstrating disease impacts on the vital rates of free‐ranging mammalian hosts typically requires intensive, long‐term study. Evidence for chronic pathogens affecting reproduction but not survival is rare, but has the potential for wide‐ranging effects. Accurately quantifying disease‐associated reductions in fecundity is important for advancing theory, generating accurate predictive models, and...
Flooding tolerance of Sagittaria latifolia and Sagittaria rigida under controlled laboratory conditions
Kevin P. Kenow, Brian R. Gray, James E. Lyons
2018, River Research and Applications (34) 1024-1031
Pool‐scale growing‐season water‐level reductions (drawdowns) have been implemented on the Upper Mississippi River in an effort to improve fish and wildlife habitat. Aquatic vegetation is a key habitat component, with perennial emergent species, such as Sagittaria latifolia and Sagittaria rigida, especially important. River managers have assumed the need for continuous drawdown during the...