Ancient convergent losses of Paraoxonase 1 yield potential risks for modern marine mammals
Wynn K. Meyer, Jerrica Jamison, Rebecca Richter, Stacy E. Woods, Raghavendran Partha, Amanda Kowalczyk, Charles Kronk, Maria Chikina, Robert K. Bonde, Daniel E. Crocker, Joseph C. Gaspard, Janet M. Lanyon, Judit Marsillach, Clement E. Furlong, Nathan L. Clark
2018, Science (361) 591-594
Mammals diversified by colonizing drastically different environments, with each transition yielding numerous molecular changes, including losses of protein function. Though not initially deleterious, these losses could subsequently carry deleterious pleiotropic consequences. We have used phylogenetic methods to identify convergent functional losses across independent marine mammal lineages....
A new approach to automated incubation recess detection using temperature loggers
Rebecca Croston, C. Alex Hartman, Mark P. Herzog, Michael L. Casazza, Joshua T. Ackerman
2018, The Condor (120) 739-750
Nest attendance during incubation is an important facet of avian nesting behavior, and understanding the number, timing, and duration of incubation recesses can improve our understanding of the factors determining avian reproductive success. Temperature loggers are a low-cost, noninvasive method for studying nest attendance, but processing and interpreting the data...
Contaminants of emerging concern in urban stormwater: Spatiotemporal patterns and removal by iron-enhanced sand filters (IESFs)
David J. Fairbairn, Sarah M. Elliott, Richard L. Kiesling, Heiko L. Schoenfuss, Mark L. Ferrey, Benjamin J. Westerhoff
2018, Water Research (145) 332-345
Numerous contaminants of emerging concern (CECs) typically occur in urban rivers. Wastewater effluents are a major source of many CECs. Urban runoff (stormwater) is a major urban water budget component and may constitute another major CEC pathway. Yet, stormwater-based CEC field studies are rare. This research investigated 384 CECs in 36 stormwater samples in Minneapolis-St. Paul, Minnesota, USA....
Kinematic, deformational, and thermochronologic conditions along the Gossan Lead and Fries shear zones: Constraining the western-eastern Blue Ridge boundary in northwestern North Carolina
Jamie S. F. Levine, Arthur J. Merschat, Ryan J. McAleer, G. Casale, K. R. Quillan, K. I. Fraser, T. G. BeDell
2018, Tectonics (37) 3500-3523
The fault boundary between the western and eastern Blue Ridge (WBR-EBR) in the southern Appalachians separates Mesoproterozoic basement rocks and their cover from Neoproterozoic to Paleozoic accreted rocks. Several northeast striking faults delineate the boundary, including the Gossan Lead shear zone in northwestern North Carolina. Varying tectonic interpretations of WBR-EBR...
Sediment fingerprinting to delineate sources of sediment in the agricultural and forested Smith Creek Watershed, Virginia, USA
Allen C. Gellis, Lillian E. Gorman Sanisaca
2018, Journal of the American Water Resources Association (54) 1197-1221
The sediment fingerprinting approach was used to apportion fine‐grained sediment to cropland, pasture, forests, and streambanks in the agricultural and forested Smith Creek, watershed, Virginia. Smith Creek is a showcase study area in the Chesapeake Bay watershed, where management actions to reduce nutrients and sediment are being monitored. Analyses of...
Molecular systematics of swifts of the genus Chaetura (Aves: Apodiformes: Apodidae)
Terry Chesser, Haley Vaseghi, Peter A. Hosner, Laura M. Bergner, M. Nandadevi Cortes-Rodriguez, Andreanna J. Welch, Charles T. Collins
2018, Molecular Phylogenetics and Evolution (128) 162-171
Phylogenetic relationships among swifts of the morphologically conservative genus Chaetura were studied using mitochondrial and nuclear DNA sequences. Taxon sampling included all species and 21 of 30 taxa (species and subspecies) within Chaetura. Our results indicate that Chaetura is monophyletic and support the division of the genus into the two subgenera previously identified using plumage characters. However, our genetic...
Elevated aeolian sediment transport on the Colorado Plateau, USA: The role of grazing, vehicle disturbance, and increasing aridity
Travis W. Nauman, Michael C. Duniway, Nichloas P. Webb, Jayne Belnap
2018, Earth Surface Processes and Landforms (43) 2897-2914
Dryland wind transport of sediment can accelerate soil erosion, degrade air quality, mobilize dunes, decrease water supply, and damage infrastructure. We measured aeolian sediment horizontal mass flux (q) at 100 cm height using passive aspirated sediment traps to better understand q variability on the Colorado Plateau. Measured q‘hot spots’ rival the highest ever...
Geologic framework for the national assessment of carbon dioxide storage resources—Atlantic Coastal Plain and Eastern Mesozoic Rift Basins
William H. Craddock, Matthew D. Merrill, Tina L. Roberts-Ashby, Sean T. Brennan, Marc L. Buursink, Ronald M. Drake II, Peter D. Warwick, Steven M. Cahan, Christina A. DeVera, Philip A. Freeman, Mayur A. Gosai, Celeste D. Lohr
Peter D. Warwick, M.D. Corum, editor(s)
2018, Open-File Report 2012-1024-N
This chapter presents information pertinent to the geologic carbon dioxide (CO2) sequestration potential within saline aquifers located in the Atlantic Coastal Plain and Eastern Mesozoic Rift Basins of the Eastern United States. The Atlantic Coastal Plain is underlain by a Jurassic to Quaternary succession of sedimentary strata that onlap westward...
Pre‐fire drought and competition mediate post‐fire conifer mortality in western U.S. National Parks
Phillip J. van Mantgem, Donald A. Falk, Emma C. Williams, Adrian J. Das, Nathan L. Stephenson
2018, Ecological Applications (28) 1730-1739
Tree mortality is an important outcome of many forest fires. Extensive tree injuries from fire may lead directly to mortality, but environmental and biological stressors may also contribute to tree death. However, there is little evidence showing how the combined effects of two common stressors, drought and competition, influence post‐fire...
Survival of whirling disease resistant rainbow trout fry in the wild: A comparison of two strains
Brian W. Avila, Dana L. Winkelman, Eric R. Fetherman
2018, Journal of Aquatic Animal Health (30) 280-290
Introduced pathogens can affect fish populations, and three main factors affect disease occurrence: the environment, host, and pathogen. Manipulating at least one of these factors is necessary for controlling disease. Myxobolus cerebralis, the parasite responsible for salmonid whirling disease, became established in Colorado during the 1990s and caused significant declines in...
Juvenile Chinook salmon and forage fish use of eelgrass habitats in a diked and channelized Puget Sound River Delta
Stephen P. Rubin, Michael C. Hayes, Eric E. Grossman
2018, Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science (10) 435-451
Eelgrass Zostera marina can form extensive meadows on Puget Sound river deltas. The extent to which these meadows provide critical rearing habitat for local estuarine fishes, especially out‐migrating juvenile salmon, is not well understood. Further, delta eelgrass has been impacted by diking and river channelization with unknown consequences for fish. We sampled...
Using United States Geological Survey stream gages to predict flow and temperature conditions to maintain freshwater mussel habitat
Jeffrey C. Cole, Phillip A. Townsend, Keith N. Eshleman, Barbara St. John White, Heather S. Galbraith, William A. Lellis
2018, River Research and Applications (34) 977-992
Habitat conditions necessary to support freshwater mussels can be difficult to characterize and predict, particularly for rare or endangered species such as the federally endangered dwarf wedgemussel, Alasmidonta heterodon. In this study, we evaluate flow and temperature conditions in three areas of the mainstem Delaware River known to consistently support A. heterodon, and...
Sensitivity of mangrove range limits to climate variability
Kyle C. Cavanaugh, Michael J. Osland, Remi Bardou, Gustavo Hinojosa-Arango, Juan M. Lopez-Vivas, John D. Parker, Andre S. Rovai
2018, Global Ecology and Biogeography (27) 925-935
AimCorrelative distribution models have been used to identify potential climatic controls of mangrove range limits, but there is still uncertainty about the relative importance of these factors across different regions. To provide insights into the strength of climatic control of different mangrove range limits, we tested...
Geologic field-trip guide of volcaniclastic sediments from snow- and ice-capped volcanoes—Mount St. Helens, Washington, and Mount Hood, Oregon
Thomas C. Pierson, Lee Siebert, Christopher J. Harpel, Kevin M. Scott
2018, Scientific Investigations Report 2017-5022-F
This field guide for the International Association of Volcanology and Chemistry of the Earth’s Interior (IAVCEI) Scientific Assembly 2017 focuses on volcaniclastic sediments from Mount St. Helens in Washington and Mount Hood in Oregon. The trip spends four days in the field and includes nine stops at each volcano. For...
Influences of the invasive tamarisk leaf beetle (Diorhabda carinulata) on avian diets along the Dolores River in Southwestern Colorado USA
Charles van Riper III, Sarah L. Puckett, Abigail J. Darrah
2018, Biological Invasions (20) 3145-3159
The tamarisk leaf beetle (Diorhabda carinulata), introduced from Eurasia in 2001 as a biological control agent for the invasive plant Tamarix ramosissima, has spread widely throughout the western USA. With D. carinulata now very abundant, scientists and restoration managers have questioned what influence this introduced arthropod might...
A bioassay assessment of a zebra mussel (Dreissena polymorpha) eradication treatment
Matthew Barbour, Jeremy K. Wise, James A. Luoma
2018, Open-File Report 2018-1138
Zebra mussels (Dreissena polymorpha, Pallas, 1771) are an aquatic invasive species in theUnited States, and new infestations of zebra mussels can rapidly expand into dense colonies. Zebramussels were first reported in Marion Lake, Dakota County, Minnesota, in September 2017, andsurveys indicated the infestation was likely isolated near a public boat...
Mercury concentrations in water and mercury and selenium concentrations in fish from Brownlee Reservoir and selected sites in the Boise and Snake Rivers, Idaho and Oregon, 2013-17
Dorene E. MacCoy, Christopher A. Mebane
2018, Open-File Report 2018-1122
Mercury (Hg) analyses were conducted on samples of water and sport fish collected from selected sampling sites in the Boise and Snake Rivers and Brownlee Reservoir, in Idaho and Oregon, to meet National Pollution Discharge and Elimination System permit requirements for the City of Boise, Idaho, from 2013 to...
Exploring drivers of regional water-quality change using differential spatially referenced regression – A pilot study in the Chesapeake Bay watershed
Jeffrey G. Chanat, Guoxiang Yang
2018, Water Resources Research (54) 8120-8145
An understanding of riverine water-quality dynamics in regional mixed-land use watersheds is the foundation for advances in landscape biogeochemistry and informed land management. A differential implementation of the statistical/process-based model SPAtially Referenced Regressions on Watershed attributes (SPARROW; Smith et al., https://doi.org/10.1029/97wr02171) is proposed to empirically relate a regional...
Effects of proposed navigation channel improvements on sediment transport in Mobile Harbor, Alabama
Davina Passeri, Joseph W. Long, Robert L. Jenkins III, David M. Thompson
2018, Open-File Report 2018-1123
A Delft3D model was developed to evaluate the potential effects of proposed navigationchannel deepening and widening in Mobile Harbor, Alabama. The model performance wasassessed through comparisons of modeled and observed data of water levels, velocities, and bedlevel changes; the model captured hydrodynamic and sediment transport patterns in the studyarea with...
Effects of early-successional shrubland management on breeding wood thrush populations
Scott Schlossberg, David I. King, Stephen DeStefano, Mitch Hartley
2018, Journal of Wildlife Management (82) 1572-1581
In forested landscapes, creation of habitat for early-successional shrubland birds is controversial because of perceived conflicts with the conservation of mature-forest birds. Nonetheless, many mature-forest birds, especially fledglings, readily use early-successional stands during the post-breeding period. This suggests that for mature-forest birds, creating habitat for early-successional...
Laboratory evaluation of the Sea-Bird Scientific HydroCycle-PO4 phosphate sensor
Teri T. Snazelle
2018, Open-File Report 2018-1120
Sea-Bird Scientific’s HydroCycle-PO4 phosphate sensor is a single-analyte wet-chemistry sensor designed for in situ environmental monitoring. The unit was evaluated at the U.S. Geological Survey Hydrologic Instrumentation Facility to assess the accuracy of the sensor in solutions with known phosphorous concentration and to test the effects of chromophoric (colored) dissolved...
The Hayward Fault—Is it due for a repeat of the powerful 1868 earthquake?
Thomas M. Brocher, Jack Boatwright, James J. Lienkaemper, Carol S. Prentice, David P. Schwartz, Howard Bundock
2018, Fact Sheet 2018-3052
On October 21, 1868, a magnitude 6.8 earthquake struck the San Francisco Bay area. Although the region was sparsely populated, the quake on the Hayward Fault was one of the most destructive in California’s history. U.S. Geological Survey (USGS) studies show that similar Hayward Fault quakes have repeatedly jolted...
Intensities, aftershock sequences, and the location of the 1936 Milton‐Freewater earthquake near the Oregon–Washington border, U.S.A.
Thomas M. Brocher, Brian Sherrod
2018, Bulletin of the Seismological Society of America (108) 2594-2613
The epicenter of the 16 July 1936 M">MM 6 Milton‐Freewater earthquake, also known as the State Line earthquake and the largest historical earthquake in northeastern Oregon or southeastern Washington, is uncertain. Various studies place the epicenter of...
Exclusion of small mammals and lagomorphs invasion interact with human-trampling to drive changes in topsoil microbial community structure and function in semiarid Chile
Fernando D. Alfaro, Marlene Manzano, Sebastian Abades, Nicole Trefault, Rodrigo de la Iglesia, Aurora Gaxiola, Pablo A. Marquet, Julio R. Gutierrez, Peter L. Meserve, Douglas A. Kelt, Jayne Belnap, Juan J. Armesto
2018, Soil Biology and Biochemistry (124) 1-10
Species losses and additions can disrupt the relationship between resident species and the structure and functioning of ecosystems. Persistent human-trampling, on the other hand, can have similar effects through the disruption of biocrusts on surface soils of semiarid systems, affecting soil stability and fixation of carbon and nitrogen. Here, we tested the...
Conceptual and numerical models of dissolved solids in the Colorado River, Hoover Dam to Imperial Dam, and Parker Dam to Imperial Dam, Arizona, California, and Nevada
David W. Anning, Alissa L. Coes, Jon P. Mason
2018, Scientific Investigations Report 2018-5108
Conceptual and numerical models were developed to understand and simulate monthly flow-weighted dissolved-solids concentrations in the Colorado River at Imperial Dam. The ability to simulate dissolved-solids concentrations at this location will help the Bureau of Reclamation satisfy the binational agreement on the volume and salinity of Colorado River water delivered...