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Publication Extents

Not all publications have extents, not all extents are completely accurate
Evaluating within-population variability in behavior and demography for the adaptive potential of a dispersal-limited species to climate change
David J. Munoz, Kyle Miller Hesed, Evan H. Campbell Grant, David A.W. Miller
2016, Ecology and Evolution (6) 8740-8755
Multiple pathways exist for species to respond to changing climates. However, responses of dispersal-limited species will be more strongly tied to ability to adapt within existing populations as rates of environmental change will likely exceed movement rates. Here, we assess adaptive capacity in Plethodon cinereus, a dispersal-limited woodland salamander. We...
Using spatial capture–recapture to elucidate population processes and space-use in herpetological studies
David J. Munoz, David A.W. Miller, Chris Sutherland, Evan H. Campbell Grant
2016, Journal of Herpetology (50) 570-581
The cryptic behavior and ecology of herpetofauna make estimating the impacts of environmental change on demography difficult; yet, the ability to measure demographic relationships is essential for elucidating mechanisms leading to the population declines reported for herpetofauna worldwide. Recently developed spatial capture–recapture (SCR) methods are well suited to standard herpetofauna...
Methods of soil resampling to monitor changes in the chemical concentrations of forest soils
Gregory B. Lawrence, Ivan J. Fernandez, Paul W. Hazlett, Scott W. Bailey, Donald S. Ross, Thomas R. Villars, Angelica Quintana, Ouimet, Michael McHale, Chris E. Johnson, Russell D. Briggs, Robert A. Colter, Jason Siemion, Olivia L. Bartlett, Olga Vargas, Michael R. Antidormi, Mary Margaret Koppers
2016, Journal of Visualized Experiments (117)
Recent soils research has shown that important chemical soil characteristics can change in less than a decade, often the result of broad environmental changes. Repeated sampling to monitor these changes in forest soils is a relatively new practice that is not well documented in the literature and has only recently...
Climatic drivers for multidecadal shifts in solute transport and methane production zones within a large peat basin
Paul H. Glaser, Donald I. Siegel, Jeffrey P. Chanton, Andrew S. Reeve, Donald O. Rosenberry, J. Elizabeth Corbett, Soumitri Dasgupta, Zeno Levy
2016, Global Biogeochemical Cycles (30) 1578-1598
Northern peatlands are an important source for greenhouse gases, but their capacity to produce methane remains uncertain under changing climatic conditions. We therefore analyzed a 43 year time series of the pore-water chemistry to determine if long-term shifts in precipitation altered the vertical transport of solutes within a large peat basin...
Saltwater intrusion monitoring in Florida
Scott T. Prinos
2016, Florida Scientist (79) 269-278
Florida's communities are largely dependent on freshwater from groundwater aquifers. Existing saltwater in the aquifers, or seawater that intrudes parts of the aquifers that were fresh, can make the water unusable without additional processing. The quality of Florida's saltwater intrusion monitoring networks varies. In Miami-Dade and Broward Counties, for example,...
Sharing our data—An overview of current (2016) USGS policies and practices for publishing data on ScienceBase and an example interactive mapping application
Katherine J. Chase, Andrew R. Bock, Roy Sando
2016, Open-File Report 2016-1202
This report provides an overview of current (2016) U.S. Geological Survey policies and practices related to publishing data on ScienceBase, and an example interactive mapping application to display those data. ScienceBase is an integrated data sharing platform managed by the U.S. Geological Survey. This report describes resources that U.S. Geological...
Genetic structure of faucet snail, Bithynia tentaculata populations in North Americal based on microsattelite markers
Kathryn E. Perez, Rebecca L. Werren, Christopher A. Lynum, Levi A. Hartman, Gabor Majoros, Rebecca A. Cole
2016, Freshwater Mollusk Biology and Conservation (19) 56-68
Bithynia tentaculata is believed to have been extirpated from North America during the last glacial maximum. It was reintroduced into North America via the Great Lakes basin in the 1800’s and has recently been expanding its geographic range. This snail serves as intermediate host for three trematodes that cause extensive...
Bald Eagle nestling mortality associated with Argas radiatus and Argas ricei tick infestation and successful management with nest removal in Arizona, USA
Anne Justice-Allen, Kathy Orr, Krysten L. Schuler, Kyle McCarty, Kenneth Jacobson, Carol U. Meteyer
2016, Journal of Wildlife Diseases (52) 940-944
Eight Bald Eagle (Haliaeetus leucocephalus) nestlings heavily infested with larval ticks were found in or under a nest near the confluence of the Verde and Salt rivers in Arizona in 2009-11. The 8-12-wk-old nestlings were slow to respond to stimuli and exhibited generalized muscle weakness or paresis of the pelvic...
Implementation and evaluation of a monthly water balance model over the US on an 800 m grid
Steven W. Hostetler, Jay R. Alder
2016, Water Resources Research (52) 9600-9620
We simulate the 1950–2010 water balance for the conterminous U.S. (CONUS) with a monthly water balance model (MWBM) using the 800 m Parameter-elevation Regression on Independent Slopes Model (PRISM) data set as model input. We employed observed snow and streamflow data sets to guide modification of the snow and potential...
Final Laurentide ice-sheet deglaciation and Holocene climate-sea level change
David J. Ullman, Anders E. Carlson, Steven W. Hostetler, Peter U. Clark, Joshua Cuzzone, Glenn A. Milne, Kelsey Winsor, Marc A. Caffee
2016, Quaternary Science Reviews (152) 49-59
Despite elevated summer insolation forcing during the early Holocene, global ice sheets retained nearly half of their volume from the Last Glacial Maximum, as indicated by deglacial records of global mean sea level (GMSL). Partitioning the GMSL rise among potential sources requires accurate dating of ice-sheet extent to estimate ice-sheet...
Depth calibration and validation of the Experimental Advanced Airborne Research Lidar, EAARL-B
C. Wayne Wright, Christine J. Kranenburg, Timothy A. Battista, Christopher Parrish
2016, Journal of Coastal Research (Special Issue 76) 4-17
The original National Aeronautics and Space Administration (NASA) Experimental Advanced Airborne Research Lidar (EAARL), was extensively modified to increase the spatial sampling density and improve performance in water ranging from 3–44 m. The new (EAARL-B) sensor features a 300% increase in spatial density, which was achieved by optically splitting each laser pulse into...
VNTR diversity in Yersinia pestis isolates from an animal challenge study reveals the potential for in vitro mutations during laboratory cultivation
Amy J. Vogler, Roxanne Nottingham, Joseph D. Busch, Jason W. Sahl, Megan M. Shuey, Jeffrey T. Foster, James M. Schupp, Susan Smith, Tonie E. Rocke, Paul Klein, David M. Wagner
2016, Infection, Genetics and Evolution (45) 297-302
Underlying mutation rates and other evolutionary forces shape the population structure of bacteria in nature. Although easily overlooked, similar forces are at work in the laboratory and may influence observed mutations. Here, we investigated tissue samples and Yersinia pestis isolates from a rodent laboratory challenge with strain CO92 using whole...
Whitebark pine mortality related to white pine blister rust, mountain pine beetle outbreak, and water availability
Erin Shanahan, Kathryn M. Irvine, David P. Thoma, Siri K. Wilmoth, Andrew Ray, Kristin Legg, Henry Shovic
2016, Ecosphere (7)
Whitebark pine (Pinus albicaulis) forests in the western United States have been adversely affected by an exotic pathogen (Cronartium ribicola, causal agent of white pine blister rust), insect outbreaks (Dendroctonus ponderosae, mountain pine beetle), and drought. We monitored individual trees from 2004 to 2013 and characterized stand-level biophysical conditions through...
Alternative source models of very low frequency events
Joan S. Gomberg, D.C. Agnew, S.Y. Schwartz
2016, Journal of Geophysical Research B: Solid Earth (121) 6722-6740
We present alternative source models for very low frequency (VLF) events, previously inferred to be radiation from individual slow earthquakes that partly fill the period range between slow slip events lasting thousands of seconds and low-frequency earthquakes (LFE) with durations of tenths of a second. We show that VLF events...
Dissolved organic matter composition of Arctic rivers: Linking permafrost and parent material to riverine carbon
Jonathan A. O’Donnell, George R. Aiken, David K. Swanson, Panda Santosh, Kenna D. Butler, Andrew P. Baltensperger
2016, Global Biogeochemical Cycles (30) 1811-1826
Recent climate change in the Arctic is driving permafrost thaw, which has important implications for regional hydrology and global carbon dynamics. Permafrost is an important control on groundwater dynamics and the amount and chemical composition of dissolved organic matter (DOM) transported by high-latitude rivers. The consequences of permafrost thaw for...
A cytosolic carbonic anhydrase molecular switch occurs in the gills of metamorphic sea lamprey
D. Ferreira-Martins, Stephen D. McCormick, A. Campos, M. Lopes-Marques, H. Osorio, J. Coimbra, L.F.C. Castro, Jonthan M Wilson
2016, Scientific Reports (6) 1-11
Carbonic anhydrase plays a key role in CO2 transport, acid-base and ion regulation and metabolic processes in vertebrates. While several carbonic anhydrase isoforms have been identified in numerous vertebrate species, basal lineages such as the cyclostomes have remained largely unexamined. Here we investigate the repertoire of cytoplasmic carbonic anhydrases in...
Aging and sexing guide to the forest birds of Hawai‘i Island
Eben H. Paxton, Rachelle McLaughlin, Stephanie Levins, Eric VanderWerf, Nolan Lancaster
2016, Technical Report HCSU-079
We banded birds in Hakalau Forest National Wildlife Refuge from 2012 to 2016, collecting photographs of birds and making detailed observations on coloration, morphology, and molting patterns. While we believe the criteria in this guide are applicable to forest birds across Hawai’i Island, as well as on other Hawaiian islands...
Environmental variability and population dynamics: Do European and North American ducks play by the same rules?
Hannu Poysa, Jukka Rintala, Douglas H. Johnson, Jukka Kauppinen, Esa Lammi, Thomas D. Nudds, Veli-Matti Vaananen
2016, Ecology and Evolution (6) 7004-7014
Density dependence, population regulation, and variability in population size are fundamental population processes, the manifestation and interrelationships of which are affected by environmental variability. However, there are surprisingly few empirical studies that distinguish the effect of environmental variability from the effects of population processes. We took advantage of a unique...
Effects of flow regime on metal concentrations and the attainment of water quality standards in a remediated stream reach, Butte, Montana
Robert L. Runkel, Briant A. Kimball, David A. Nimick, Katherine Walton-Day
2016, Environmental Science & Technology (50) 12641-12649
Low-flow synoptic sampling campaigns are often used as the primary tool to characterize watersheds affected by mining. Although such campaigns are an invaluable part of site characterization, investigations which focus solely on low-flow conditions may yield misleading results. The objective of this paper is to demonstrate this point and elucidate...
2016 update on induced earthquakes in the United States
Mark D. Petersen
2016, Book chapter, 2016 Britannica Book of the Year (A Review of 2015)
During the past decade people living in numerous locations across the central U.S. experienced many more small to moderate sized earthquakes than ever before. This earthquake activity began increasing about 2009 and peaked during 2015 and into early 2016. For example, prior to 2009 Oklahoma typically experienced 1 or...
Populations of concern
Janet Gamble, John Balbus, Martha Berger, Karen Bouye, Vince Campbell, Karletta Chief, K. Conlon, Allison Crimmins, Barry Flanagan, C. Gonzalez-Maddux, E. Hallisey, S. Hutchins, L. Jantarasami, S. Khoury, M. Kiefer, J. Kolling, K. Lynn, A. Manangan, M. McDonald, R. Morello-Frosch, Margaret Hiza, P. Sheffield, K. Thigpen Tart, J. Watson, K.P. Whyte, A.F. Wolkin
2016, Report, The impacts of climate change on human health in the Untited States: A scientific assessment
Climate change is already causing, and is expected to continue to cause, a range of health impacts that vary across different population groups in the United States. The vulnerability of any given group is a function of its sensitivity to climate change related health risks, its exposure to those risks,...
Pan-arctic trends in terrestrial dissolved organic matter from optical measurements
Paul J. Mann, Robert G. M. Spencer, Peter J. Hernes, Johan Six, George R. Aiken, Suzanne E. Tank, James W. McClelland, Kenna D. Butler, Rachael Y. Dyda, Robert M. Holmes
2016, Frontiers in Earth Science (4)
Climate change is causing extensive warming across Arctic regions resulting in permafrost degradation, alterations to regional hydrology and shifting amounts and composition of dissolved organic matter (DOM) transported by streams and rivers. Here, we characterize the DOM composition and optical properties of the six largest Arctic rivers draining into the...
Impacts of short-rotation early-growing season prescribed fire on a ground nesting bird in the central hardwoods region of North America
H. Tyler Pittman, David G. Krementz
2016, PLoS ONE (11) 1-14
Landscape-scale short-rotation early-growing season prescribed fire, hereafter prescribed fire, in upland hardwood forests represents a recent shift in management strategies across eastern upland forests. Not only does this strategy depart from dormant season to growing season prescriptions, but the strategy also moves from stand-scale to landscape-scale implementation (>1,000 ha). This...
Novel picornavirus associated with avian keratin disorder in Alaskan birds
Maxine Zylberberg, Caroline R. Van Hemert, John P. Dumbacher, Colleen M. Handel, Tarik Tihan, Joseph L. DeRisi
2016, mBio (7) 1-10
Avian keratin disorder (AKD), characterized by debilitating overgrowth of the avian beak, was first documented in black-capped chickadees (Poecile atricapillus) in Alaska. Subsequently, similar deformities have appeared in numerous species across continents. Despite the widespread distribution of this emerging pathology, the cause of AKD remains elusive. As a result, it...