Spatial and temporal genetic analysis of Walleyes in the Ohio River
Kevin S. Page, Richard D. Zweifela, Wendylee Stott
2017, Transactions of the American Fisheries Society (146) 1168-1185
Previous genetic analyses have shown that Walleyes Sander vitreus in the upper Ohio River comprise two distinct genetic strains: (1) fish of Great Lakes origin that were stocked into the Ohio River basin and (2) a remnant native strain (Highlands strain). Resource agencies are developing management strategies to conserve and restore the...
Effects of CFT Legumine (5% Rotenone) on tadpole survival and metamorphosis of Chiricahua leopard frogs Lithobates chiricahuensis, Northern leopard frogs L. pipiens, and American bullfrogs L. catesbeianus
Guillermo Alvarez, Colleen A. Caldwell, Carter G. Kruse
2017, Transactions of the American Fisheries Society (146) 512-522
Amphibians may experience collateral effects if exposed to CFT Legumine (5% rotenone), a piscicide that is used to remove invasive fish. A series of 48-h static toxicity tests assessed the acute effects of CFT Legumine on multi-aged tadpoles of the federally listed Chiricahua leopard frog Lithobates chiricahuensis, the widespread northern leopard...
When perception reflects reality: Non-native grass invasion alters small mammal risk landscapes and survival
Joseph P. Ceradnini, Anna D. Chalfoun
2017, Ecology and Evolution (7) 1823-1835
Modification of habitat structure due to invasive plants can alter the risk landscape for wildlife by, for example, changing the quality or availability of refuge habitat. Whether perceived risk corresponds with actual fitness outcomes, however, remains an important open question. We simultaneously measured how habitat changes due to a common...
The basis function approach for modeling autocorrelation in ecological data
Trevor J. Hefley, Kristin M. Broms, Brian M. Brost, Frances E. Buderman, Shannon L. Kay, Henry Scharf, John Tipton, Perry J. Williams, Mevin Hooten
2017, Ecology (98) 632-646
Analyzing ecological data often requires modeling the autocorrelation created by spatial and temporal processes. Many seemingly disparate statistical methods used to account for autocorrelation can be expressed as regression models that include basis functions. Basis functions also enable ecologists to modify a wide range of existing ecological models in order...
LANDFIRE 2015 Remap – Utilization of Remotely Sensed Data to Classify Existing Vegetation Type and Structure to Support Strategic Planning and Tactical Response
Joshua J. Picotte, Jordan Long, Birgit Peterson, Kurtis Nelson
2017, Earthzine (March 2017)
The LANDFIRE Program produces national scale vegetation, fuels, fire regimes, and landscape disturbance data for the entire U.S. These data products have been used to model the potential impacts of fire on the landscape [1], the wildfire risks associated with land and resource management [2, 3], and those near population centers...
Top-down control of invertebrates by Ninespine Stickleback in Arctic ponds
Sarah M. Laske, Amanda E. Rosenberger, William J. Kane, Mark S. Wipfli, Christian E. Zimmerman
2017, Freshwater Science (36) 124-137
Despite their widespread presence in northern-latitude ecosystems, the ecological role of Ninespine Stickleback Pungitius pungitius is not well understood. Ninespine Stickleback can occupy both top and intermediate trophic levels in freshwater ecosystems, so their role in food webs as a predator on invertebrates and as a forage fish for upper level consumers...
Extended late Holocene relative sea-level histories for North Carolina, USA
Andrew C. Kemp, Jessica J. Kegel, Stephen J. Culver, Donald C. Barber, David J. Mallinson, Eduardo Leorri, Christopher E. Bernhardt, Niamh Cahill, Stanley R. Riggs, Anna L. Woodson, Ryan P. Mulligan, Benjamin P. Horton
2017, Quaternary Science Reviews (160) 13-30
We produced ∼3000-year long relative sea-level (RSL) histories for two sites in North Carolina (USA) using foraminifera preserved in new and existing cores of dated salt-marsh sediment. At Cedar Island, RSL rose by ∼2.4 m during the past ∼3000 years compared to ∼3.3 m at Roanoke Island. This spatial difference arises primarily from...
Integrating multiple data sources in species distribution modeling: A framework for data fusion
Krishna Pacifici, Brian J. Reich, David A.W. Miller, Beth Gardner, Glenn E. Stauffer, Susheela Singh, Alexa McKerrow, Jaime A. Collazo
2017, Ecology (98) 840-850
The last decade has seen a dramatic increase in the use of species distribution models (SDMs) to characterize patterns of species’ occurrence and abundance. Efforts to parameterize SDMs often create a tension between the quality and quantity of data available to fit models. Estimation methods that integrate both standardized and...
Conservation status of the American horseshoe crab, (Limulus polyphemus): A regional assessment
David R. Smith, H. Jane Brockmann, Mark A. Beekey, Tim L. King, Mike Millard, Jaime Zaldivar-Rae
2017, Reviews in Fish Biology and Fisheries (27) 135-175
Horseshoe crabs have persisted for more than 200 million years, and fossil forms date to 450 million years ago. The American horseshoe crab (Limulus polyphemus), one of four extant horseshoe crab species, is found along the Atlantic coastline of North America ranging from Alabama to Maine, USA with...
Reply to: Terry, J. and Goff, J. comment on “Late Cenozoic sea level and the rise of modern rimmed atolls” by Toomey et al. (2016), Palaeogeography, Palaeoclimatology, Palaeoecology 4 51: 73–83.
Michael Toomey, Andrew Ashton, Maureen E. Raymo, J. Taylor Perron
2017, Palaeogeography, Palaeoclimatology, Palaeoecology (469) 159-160
We appreciate Terry and Goff's thoughtful comment in response to our proposed atoll development model. Flank collapse of reef-built slopes likely does affect plan-form atoll morphology in some locations and potentially poses a tsunami hazard to low-lying Pacific islands (Terry and Goff, 2013). However, given the often rapid rates...
Intraspecific functional diversity of common species enhances community stability
Connor M. Wood, Shawn T. McKinney, Cynthia S. Loftin
2017, Ecology and Evolution (7) 1553-1560
Common species are fundamental to the structure and function of their communities and may enhance community stability through intraspecific functional diversity (iFD). We measured among-habitat and within-habitat iFD (i.e., among- and within-plant community types) of two common small mammal species using stable isotopes and functional trait dendrograms, determined whether iFD...
Who knew? First Myotis sodalis (Indiana Bat) maternity colony in the coastal plain of Virginia
Michael J. St. Germain, Andrew B. Kniowski, Alexander Silvis, W. Mark Ford
2017, Northeastern Naturalist (24) N5-N10
We report the first confirmed Myotis sodalis (Indiana Bat) maternity colony in Virginia, discovered at Fort A.P. Hill Military Reservation in Caroline County along the Piedmont-Coastal Plain Fall Line. Acoustic surveys conducted in 2014 indicated likely presence of Indiana Bats on the installation. Subsequent focal mist-netting during May–June 2015 resulted...
Rapid carbon loss and slow recovery following permafrost thaw in boreal peatlands
Miriam C. Jones, Jennifer W. Harden, Jonathan A. O’Donnell, Kristen L. Manies, M. Torre Jorgenson, Claire C. Treat, Stephanie Ewing
2017, Global Change Biology (23) 1109-1127
Permafrost peatlands store one-third of the total carbon (C) in the atmosphere and are increasingly vulnerable to thaw as high-latitude temperatures warm. Large uncertainties remain about C dynamics following permafrost thaw in boreal peatlands. We used a chronosequence approach to measure C stocks in forested permafrost plateaus (forest) and thawed...
Recalibration of the Mars Science Laboratory ChemCam instrument with an expanded geochemical database
Samuel M. Clegg, Roger C. Wiens, Ryan B. Anderson, Olivier Forni, Jens Frydenvang, Jeremie Lasue, Agnes Cousin, Valerie Payre, Tommy Boucher, M. Darby Dyar, Scott M. McLennan, Richard V. Morris, Trevor G. Graff, Stanley A Mertzman, Bethany L. Ehlmann, Ines Belgacem, Horton E. Newsom, Ben C. Clark, Noureddine Melikechi, Alissa Mezzacappa, Rhonda E. McInroy, Ronald Martinez, Patrick J. Gasda, Olivier Gasnault, Sylvestre Maurice
2017, Spectrochimica Acta Part B: Atomic Spectroscopy (129) 64-85
The ChemCam Laser-Induced Breakdown Spectroscopy (LIBS) instrument onboard the Mars Science Laboratory (MSL) rover Curiosity has obtained > 300,000 spectra of rock and soil analysis targets since landing at Gale Crater in 2012, and the spectra represent perhaps the largest publicly-available LIBS datasets. The compositions of the major elements, reported as...
Winter 2016, Part B—Coastal oblique aerial photographs collected from Assateague Island, Virginia, to Montauk Point, New York, March 8–9, 2016
Karen L. M. Morgan
2017, Data Series 1030
The U.S. Geological Survey (USGS), as part of the National Assessment of Coastal Change Hazards project, conducts baseline and storm-response photography missions to document and understand the changes in the vulnerability of the Nation's coasts to extreme storms. On March 8–9, 2016, the USGS conducted an oblique aerial photographic survey...
Winter 2016, Part A—Coastal oblique aerial photographs collected from the South Carolina/North Carolina border to Assateague Island, Virginia, February 18–19, 2016
Karen L. M. Morgan
2017, Data Series 1029
The U.S. Geological Survey (USGS), as part of the National Assessment of Coastal Change Hazards project, conducts baseline and storm-response photography missions to document and understand the changes in the vulnerability of the Nation's coasts to extreme storms. On February 18–19, 2016, the USGS conducted an oblique aerial photographic survey...
Preparing future fisheries professionals to make good decisions
Michael E. Colvin, James T. Peterson
2017, Fisheries (41) 473-474
Future fisheries professionals will face decision-making challenges in an increasingly complex field of fisheries management. Though fisheries students are well trained in the use of the scientific method to understand the natural world, they are rarely exposed to structured decision making (SDM) as part of an undergraduate or graduate education....
Aquatic concentrations of chemical analytes compared to ecotoxicity estimates
Mitchell S. Kostich, Robert W. Flick, Angela L. Batt, Heath E. Mash, J. Scott Boone, Edward T. Furlong, Dana W. Kolpin, Susan T. Glassmeyer
2017, Science of the Total Environment (579) 1649-1657
We describe screening level estimates of potential aquatic toxicity posed by 227 chemical analytes that were measured in 25 ambient water samples collected as part of a joint USGS/USEPA drinking water plant study. Measured concentrations were compared to biological effect concentration (EC) estimates, including USEPA aquatic life criteria, effective plasma...
Contaminants of emerging concern in the Great Lakes Basin: A report on sediment, water, and fish tissue chemistry collected in 2010-2012
Steven J. Choy, Mandy L. Annis, JoAnn Banda, Sarah R. Bowman, Mark E. Brigham, Sarah M. Elliott, Daniel J. Gefell, Mark Jankowski, Zachary G. Jorgenson, Kathy Lee, Jeremy N. Moore, William A. Tucker
2017, Biological Technical Publication BTP-R3017-2013
Despite being detected at low levels in surface waters and sediments across the United States, contaminants of emerging concern (CECs) in the Great Lakes Basin are not well characterized in terms of spatial and temporal occurrence. Additionally, although the detrimental effects of exposure to CECs on fish and wildlife have...
Potential concerns with analytical Methods Used for the detection of Batrachochytrium salamandrivorans from archived DNA of amphibian swab samples, Oregon, USA
Deborah D. Iwanowicz, William B. Schill, Deanna H. Olson, M. J. Adams, Christine L. Densmore, Robert S. Cornman, Cynthia R. Adams, Chester Figiel, Chauncey W. Anderson, Andrew R Blaustein, Tara Chestnut
2017, Environmental Entomology (48) 352-355
Taxonomic identification of pollen has historically been accomplished via light microscopy but requires specialized knowledge and reference collections, particularly when identification to lower taxonomic levels is necessary. Recently, next-generation sequencing technology has been used as a cost-effective alternative for identifying bee-collected pollen; however, this novel approach has not been tested...
Trends in the quality of water in New Jersey streams, water years 1971–2011
R. Edward Hickman, Robert M. Hirsch
2017, Scientific Investigations Report 2016-5176
In a study conducted by the U.S. Geological Survey in cooperation with the New Jersey Department of Environmental Protection and the Delaware River Basin Commission, trend tests were conducted on selected water-quality characteristics measured at stations on streams in New Jersey during selected periods over water years 1971‒2011. Tests were...
Water-quality sampling plan for evaluating the distribution of bigheaded carps in the Illinois Waterway
James J. Duncker, Paul J. Terrio
2017, Open-File Report 2017-1019
The two nonnative invasive bigheaded carp species (bighead carp Hypophthalmichthys nobilis and silver carp H. molitrix) that were accidentally released in the 1970s have spread widely into the rivers and waterways of the Mississippi River Basin. First detected in the lower reaches of the Illinois Waterway (IWW, the combined Illinois...
Geochemistry and hydrology of perched groundwater springs: assessing elevated uranium concentrations at Pigeon Spring relative to nearby Pigeon Mine, Arizona (USA)
Kimberly R. Beisner, Nicholas V. Paretti, Fred D. Tillman, David L. Naftz, Donald J. Bills, Katherine Walton-Day, Tanya J. Gallegos
2017, Hydrogeology Journal (25) 539-556
The processes that affect water chemistry as the water flows from recharge areas through breccia-pipe uranium deposits in the Grand Canyon region of the southwestern United States are not well understood. Pigeon Spring had elevated uranium in 1982 (44 μg/L), compared to other perched springs (2.7–18 μg/L), prior to mining...
Shifts in microbial community structure and function in surface waters impacted by unconventional oil and gas wastewater revealed by metagenomics
N.L. Fahrenfeld, Hannah Delos Reyes, Alessia Eramo, Denise M. Akob, Adam C. Mumford, Isabelle M. Cozzarelli
2017, Science of the Total Environment 1205-1213
Unconventional oil and gas (UOG) production produces large quantities of wastewater with complex geochemistry and largely uncharacterized impacts on surface waters. In this study, we assessed shifts in microbial community structure and function in sediments and waters upstream and downstream from a UOG wastewater disposal facility. To do this, quantitative...
Nonnative trout invasions combined with climate change threaten persistence of isolated cutthroat trout populations in the southern Rocky Mountains
James J. Roberts, Kurt D. Fausch, Mevin Hooten, Douglas P. Peterson
2017, North American Journal of Fisheries Management (37) 314-325
Effective conservation of Cutthroat Trout Oncorhynchus clarkii lineages native to the Rocky Mountains will require estimating effects of multiple stressors and directing management toward the most important ones. Recent analyses have focused on the direct and indirect effects of a changing climate on contemporary ranges, which are much reduced from historic...
