Evaluating ecosystem protection and fragmentation of the world's major mountain regions
David M. Theobald, Aerin Jacobs, Paul R. Elsen, Erik A. Beever, Libby Ehlers, Jodi Hilty
2024, Conservation Biology (38)
Conserving mountains is important for protecting biodiversity because they have high beta diversity and endemicity, facilitate species movement, and provide numerous ecosystem benefits for people. Mountains are often thought to have lower levels of human modification and contain more protected area than surrounding lowlands. To...
Foraging behavior and age affect maternal transfer of mercury to northern elephant seal pups
Sarah H. Peterson, Michael G. Peterson, Joshua T. Ackerman, Cathy Debier, Chandra Goetsch, Rachel R. Holser, Luis A. Huckstadt, Jennifer C. Johnson, Theresa R. Keates, Birgitte I. McDonald, Elizabeth A. McHuron, Daniel P. Costa
2024, Scientific Reports (14)
Deep ocean foraging northern elephant seals (Mirounga angustirostris) consume fish and squid in remote depths of the North Pacific Ocean. Contaminants bioaccumulated from prey are subsequently transferred by adult females to pups during gestation and lactation, linking pups to mercury contamination in mesopelagic food webs (200–1000 m...
Metabarcoding is (usually) more cost effective than seining or qPCR for detecting tidewater gobies and other estuarine fishes
Kevin D. Lafferty
2024, PeerJ (12)
Many studies have shown that environmental DNA (eDNA) sampling can be more sensitive than traditional sampling. For instance, past studies found a specific qPCR probe of a water sample is better than a seine for detecting the endangered northern tidewater goby, Eucyclogobius newberryi. Furthermore, a metabarcoding sample often detects more...
High inter-population connectivity and occasional gene flow between subspecies improves recovery potential for the endangered Least Bell’s Vireo
Amy G. Vandergast, Barbara E. Kus, Dustin A. Wood, Anna Mitelberg, Julia G. Smith, Elizabeth R. Milano
2024, Ornithological Applications (126)
Increasingly, genomic data are being used to supplement field-based ecological studies to help evaluate recovery status and trends in endangered species. We collected genomic data to address two related questions regarding the Least Bell’s Vireo (Vireo bellii), an endangered migratory songbird restricted to southern California riparian habitat for breeding....
Segment anything model can not segment anything: Assessing AI foundation model's generalizability in permafrost mapping
Wenwen Li, Chia-Yu Hsu, Sizhe Wang, Yezhou Yang, Hyunho Lee, Anna Liljedahl, Chandi Witharana, Yili Yang, Brendan M. Rogers, Samantha Arundel, Matthew B. Jones, Kenton McHenry, Patricia Solis
2024, Remote Sensing (16)
This paper assesses trending AI foundation models, especially emerging computer vision foundation models and their performance in natural landscape feature segmentation. While the term foundation model has quickly garnered interest from the geospatial domain, its definition remains vague. Hence, this paper will first introduce AI foundation models and their defining...
Forest fire, thinning, and flood in wildland-urban interface: UAV and lidar-based estimate of natural disaster impacts
Temuulen Ts. Sankey, Lauren Tango, Julia Tatum, Joel B. Sankey
2024, Landscape Ecology (39)
ContextWildland-urban interface (WUI) areas are facing increased forest fire risks and extreme precipitation events due to climate change, which can lead to post-fire flood events. The city of Flagstaff in northern Arizona, USA experienced WUI forest thinning, fire, and record rainfall events, which collectively contributed to large floods...
Flow cytometric assessments of metabolic activity in bacterial assemblages provide insight into ecosystem condition along the Buffalo National River, Arkansas
Jill Jenkins, Rassa Dale, Nina M. Hoffpauir, Brooke A Baudoin, Caroline Matkin, Lucas Driver, Shawn W Hodges, Bonnie L. Brown
2024, Science of the Total Environment (921)
The Buffalo National River (BNR), on karst terrain in Arkansas, is considered an extraordinary water resource. Water collected in Spring 2017 along BNR was metagenomically analyzed using 16S rDNA, and for 17 months (5/2017–11/2018), bacterial responses were measured in relation to nutrients sampled along a...
Prioritizing water availability study settings to address geogenic contaminants and related societal factors
Melinda L. Erickson, Craig J. Brown, Elizabeth J. Tomaszewski, Joseph D. Ayotte, Sharon L. Qi, Douglas B. Kent, J.K. Bohlke
2024, Environmental Monitoring and Assessment (196)
Water availability for human and ecological uses depends on both water quantity and water quality. The U.S. Geological Survey (USGS) is developing strategies for prioritizing regional-scale and watershed basin-scale studies of water availability across the nation. Previous USGS ranking processes for basin-scale studies incorporated primarily water quantity factors...
Range-wide population trend analysis for greater sage-grouse (Centrocercus urophasianus)—Updated 1960–2023
Brian G. Prochazka, Peter S. Coates, Cameron L. Aldridge, Michael S. O’Donnell, David R. Edmunds, Adrian P. Monroe, Steve E. Hanser, Lief A. Wiechman, Michael P. Chenaille
2024, Data Report 1190
Greater sage-grouse (Centrocercus urophasianus) are at the center of state and national land-use policies largely because of their unique life-history traits as an ecological indicator for health of sagebrush ecosystems. This updated population trend analysis provides state and federal land and wildlife managers with best-available science to help guide management...
Monarch butterfly (Danaus plexippus) roost site-selection criteria and locations east of the Appalachian Mountains, U.S.A.
Brandon M. Boxler, Cyndy Loftin, William B. Sutton
2024, Journal of Insect Behavior (37) 22-48
The monarch butterfly is a flagship species and pollinator whose populations have declined by 85% in the recent two decades. Their largest population overwinters in Mexico, then disperses across eastern North America during March to August. During September-December, they return south using two flyways, one that spans the central United...
Monarch butterfly (Danaus plexippus) roost site-selection criteria and locations east of the Appalachian Mountains, U.S.A.
Brandon M. Boxler, Cyndy Loftin, William B. Sutton
2024, Journal of Insect Behavior (37) 22-48
The monarch butterfly is a flagship species and pollinator whose populations have declined by 85% in the recent two decades. Their largest population overwinters in Mexico, then disperses across eastern North America during March to August. During September-December, they return south using two flyways, one that spans the central United...
Non-mercury methylating microbial taxa are integral to understanding links between mercury methylation and elemental cycles in marine and freshwater sediments
Yong-Li Wang, Kaoru Ikuma, Scott C. Brooks, Matthew S. Varonka, Amrika Deonarine
2024, Environmental Pollution (346)
The goal of this study was to explore the role of non-mercury (Hg) methylating taxa in mercury methylation and to identify potential links between elemental cycles and Hg methylation. Statistical approaches were utilized to investigate the microbial community and biochemical functions in relation to methylmercury (MeHg) concentrations in marine and...
20th century warming in the lower Florida Keys was dominated by increasing winter temperatures
Jennifer A. Flannery, Julie N. Richey, Lauren Toth, Madelyn Jean Mette
2024, Paleoceanography and Paleoclimatology (39)
Long-lived Atlantic coral species like Orbicella faveolata are important archives of oceanographic change in shallow, marine environments like the Florida Keys. Not only can coral-based records extend for multiple centuries beyond the limits of the instrumental record, but they can also provide a more accurate representation of in situ...
Urbanization and water management control stream water quality along a mountain to plains transition
Sheila F. Murphy, Robert L. Runkel, Edward G. Stets, Alex J Nolan, Deborah A. Repert
2024, Water Resources Research (60)
Urbanization can have substantial effects on water quality due to altered hydrology and introduction of constituents to water bodies. In arid and semi-arid environments, streams are further stressed by dewatering as a result of diversions. We conducted a high-resolution synoptic survey of two streams in Colorado, USA...
Assessing grass carp (Ctenopharyngodon idella) occupancy and detection probability within Lake Erie from environmental DNA
Justin Bopp, Lucas R. Nathan, John D. Robinson, Jeanette Kanefsky, Kim T. Scribner, Seth Herbst, Kelly Filer Robinson
2024, Management of Biological Invasions (15) 51-72
Grass carp (Ctenopharyngodon idella), an invasive cyprinid within the Laurentian Great Lakes, is naturally reproducing in several Lake Erie tributaries, which has raised concerns of the species’ spread throughout Lake Erie and the other Great Lakes. Knowledge of the recent invasion extent outside of the western basin of Lake Erie,...
USGS and social media user dialogue and sentiment during the 2018 eruption of Kīlauea Volcano, Hawaii
Robert T. Goldman, Sara K. McBride, Wendy K. Stovall, David Damby
2024, Frontiers in Communication (9)
Responsive and empathic communication by scientists is critical for building trust and engagement with communities, which, in turn, promotes receptiveness toward authoritative hazard information during times of crisis. The 2018 eruption of Hawai‘i's Kīlauea Volcano was the first volcanic crisis event in which communication via the U.S. Geological Survey (USGS)...
Ensemble2: Scenarios ensembling for communication and performance analysis
Clara Bay, Guillaume St-Onge, Jessica T. Davis, Matteo Chinazzi, Emily Howerton, Justin Lessler, Michael C. Runge, Katriona Shea, Shaun Truelove, Cecile Viboud, Alessandro Vespignani
2024, Epidemics (46)
Throughout the COVID-19 pandemic, scenario modeling played a crucial role in shaping the decision-making process of public health policies. Unlike forecasts, scenario projections rely on specific assumptions about the future that consider different plausible states-of-the-world that may or may not be realized and that depend on policy interventions, unpredictable changes in the...
Liquefaction timing and post-triggering seismic energy: A comparison of crustal and subduction zone earthquakes
Trevor J. Carey, Atira Naik, Andrew James Makdisi, Henry Mason
2024, Conference Paper, Proceedings, Geo-Congress 2024
The objective of the study is to assess when liquefaction is triggered in a suite of ground motions following simplified approaches and measure the remaining post-triggering energy content of those ground motions. For liquefaction-induced deformations, current simplified analysis procedures do not directly incorporate temporal effects and rely on peak transient...
Havasuw baj gwawg gnavg
Carletta Tilousi, Jo Ellen Hinck
2024, General Information Product 241
The conceptual risk framework, previously developed by the U.S. Geological Survey, for uranium mining was updated to include indigenous knowledge components informed by the Havasupai Tribe perspective. This General Information Product was designed to show the contaminant exposure framework from the Havasupai perspective in the Havasupai language....
Evaluation and review of best management practices for the reduction of polychlorinated biphenyls to the Chesapeake Bay
Trevor P. Needham, Emily H. Majcher, Ellie P. Foss, Olivia Devereux
2024, Scientific Investigations Report 2023-5074
Polychlorinated biphenyls (PCBs) continue to impact the environment due to historic and ongoing anthropogenic sources (for example, industrial and agricultural), despite their ban. Contaminated stormwater has been identified as a vector for PCB transport to many estuaries impaired by PCBs. Management of these regulated discharges is typically achieved by best...
Determinants of spring migration departure dates in a New World sparrow: Weather variables reign supreme
Allison J. Byrd, Katherine M. Talbott, Tara M. Smiley, Taylor B. Verrett, Michael S. Gross, Michelle L. Hladik, Ellen D. Ketterson, Daniel J. Becker
2024, Ecology and Evolution (14)
Numerous factors influence the timing of spring migration in birds, yet the relative importance of intrinsic and extrinsic variables on migration initiation remains unclear. To test for interactions among weather, migration distance, parasitism, and physiology in determining spring departure date, we used the Dark-eyed...
Local environments, not invasive hybridization, influence cardiac performance of native trout under acute thermal stress
Jeffrey Strait, Jared Grummer, Nicholas Hoffman, Clint C. Muhlfeld, Shawn R. Narum, Gordon Luikart
2024, Evolutionary Applications (17)
Climate-induced expansion of invasive hybridization (breeding between invasive and native species) poses a significant threat to the persistence of many native species worldwide. In the northern U.S. Rocky Mountains, hybridization between native cutthroat trout and non-native rainbow trout has increased in recent decades due,...
Stable isotopes reveal that foraging strategy dictates trophic response of salt marsh residents to black mangrove Avicennia germinans range expansion
Katherine B. Loesser, Christina E. Powell, Brandeus Davis, Melissa Millman Baustian, Michael J. Polito
2024, Marine Ecology Progress Series (729) 81-97
Climate warming has facilitated the expansion of black mangrove Avicennia germinans (hereafter ‘Avicennia’) into smooth cordgrass Spartina alterniflora (hereafter ‘Spartina’) salt marshes in southeastern Louisiana (USA). As macrophytes contribute to soil organic matter (SOM) and primary production, this transition could alter the basal energy pathways supporting salt marsh food webs. We used bulk-tissue...
Strong variation in Brook Trout trends across geology, elevation, and stream size in Shenandoah National Park
Evan S. Childress, David E Demarest, John E.B. Wofford, Nathaniel P. Hitt, Benjamin Letcher
2024, Transactions of the American Fisheries Society (153) 250-263
ObjectiveLandscape context structures fish abundance and dynamics, and understanding trends in fish abundance across the landscape is often prerequisite for effective conservation. In this study, we evaluated the status and trends of Brook Trout Salvelinus fontinalis in Shenandoah National Park to understand how these are structured across bedrock geology,...
A biodynamic model predicting copper and cadmium bioaccumulation in caddisflies: Linkages between field studies and laboratory exposures
Michelle I. Hornberger
2024, PLoSOne (19)
Hydropsyche and Arctopsyche are filter-feeding caddisflies (Order: Trichoptera; Family: Hydropsychidae) that are commonly used to monitor metal exposures in rivers. While tissue residue concentrations provide important bioaccumulation data regarding metal bioavailability, they do not provide information regarding the mechanisms of uptake and loss, or exposure history. This study examined...