Exposure and potential effects of pesticides and pharmaceuticals in protected streams of the US National Park Service southeast Region
Paul M. Bradley, Kristin M. Romanok, Jeffrey R. Duncan, William Battaglin, Jimmy Clark, Michelle Hladik, Bradley Huffman, Luke Iwanowicz, Celeste A. Journey, Kelly Smalling
2019, Science of the Total Environment (704)
Globally protected areas offer refugia for a broad range of taxa including threatened and endangered species. The United States National Park Service (NPS) manages public lands to preserve biodiversity, but increasing park visitation and development of surrounding landscapes increase exposure to and effects from bioactive contaminants. The risk (exposure and...
Depth to bedrock based on modeling of gravity data of the eastern part of Edwards Air Force Base, California
Victoria Langenheim, Andrew Morita, Allen H. Christensen, Geoffrey Cromwell, Christopher P. Ely
2019, Open-File Report 2019-1128
We describe a gravity survey acquired to determine the thickness of basin-fill deposits (depth to bedrock) and to delineate geologic structures that might influence groundwater flow beneath the eastern part of Edwards Air Force Base, California. Inversion of these gravity data combined with geologic map and well information provides an...
Response of tidal marsh vegetation to pulsed increases in flooding and nitrogen
Meagan M McCoy, Taylor M Sloey, Rebecca J. Howard, Mark W. Hester
2019, Wetlands Ecology and Management (28) 119-135
Worldwide, human activities have modified hydrology and nutrient loading regimes in coastal wetlands. Understanding the interplay between these drivers and subsequent response of wetland plant communities is essential to informing wetland management and restoration efforts. Recent restoration strategies in Louisiana proposes to use sediment diversions from the Mississippi River to...
Yukon-Kuskokwim Delta Berry Outlook: Final Report
Nicole M. Herman-Mercer, Rachel A. Loehman
2019, Report
No abstract available. ...
Developing and optimizing shrub parameters representing sagebrush (Artemisia spp.) ecosystems in the Northern Great Basin using the Ecosystem Demography (EDv2.2) model
Karun Pandit, Hamid Dasthi, Nancy Glenn, Alejandro Flores, Kaitlin C. Maguire, Douglas J. Shinneman, Gerald Flerchinger, Aaron Fellow
2019, Geoscientific Model Development (12) 4585-4601
Ecosystem dynamic models are useful for understanding ecosystem characteristics over time and space because of their efficiency over direct field measurements and applicability to broad spatial extents. Their application, however, is challenging due to internal model uncertainties and complexities arising from distinct qualities of the ecosystems being analyzed. The sagebrush-steppe...
Generation of lamprey monoclonal antibodies (Lampribodies) using the phage display system
Khan M A Hassan, John Hansen, Brantley R Herrin, Chris T Amemiya
2019, Biomolecules (9)
The variable lymphocyte receptors (VLRs) consist of leucine rich repeats (LRRs) and comprise the humoral antibodies produced by lampreys and hagfishes. The diversity of the molecules is generated by stepwise genomic rearrangements of LRR cassettes dispersed throughout the VLRB locus. Previously, target-specific monovalent VLRB antibodies were isolated from sea lamprey...
Improved genetic identification of acipenseriform embryos with application to the endangered pallid sturgeon Scaphirhynchus albus
Tom Kashiwagi, Aaron J. Delonay, Patrick Braaten, Kimberly Chojnacki, Rachel M. Gocker, Edward J. Heist
2019, Journal of Fish Biology (96) 486-495
We produced pallid sturgeon Scaphirhynchus albus embryos at five pre‐hatch developmental stages and isolated and quantified genomic DNA from four of the stages using four commercial DNA isolation kits. Genomic DNA prepared using the kit that produced the largest yields and concentrations were used for microsatellite DNA analyses of 10–20...
High-resolution and accurate topography reconstruction of Mount Etna from Pleiades satellite data
Monica Palaseanu-Lovejoy, Marina Bisson, Claudia Spinetti, Maria Fabrizia Buongiorno, Oleg Alexandrov, Thomas Cecere
2019, Remote Sensing (11)
The areas characterized by dynamic and rapid morphological changes need accurate topography information with frequent updates, especially if these are populated and involve infrastructures. This is particularly true in active volcanic areas such as Mount (Mt.) Etna, located in the northeastern portion of Sicily, Italy. The Mt. Etna volcano is...
Earthquakes, ShakeMap
David J. Wald, Charles Worden, Eric M. Thompson, Mike Hearne
2019, Book chapter, Encyclopedia of Solid Earth Geophysics
ShakeMap® is an open-source software program employed to automatically produce a suite of maps and products that portray the geographical extent and severity of potentially damaging shaking following an earthquake. ShakeMap’s primary purpose is to provide post-earthquake situational awareness for emergency management and response as well...
A pragmatic approach for comparing species distribution models to increasing confidence in managing piping plover habitat
Brooke Maslo, Sara Zeigler, Evan Drake, Todd Pover, Nathaniel G. Plant
2019, Conservation Science and Practice (2)
Conservation management often requires decision-making without perfect knowledge of the at-risk species or ecosystem. Species distribution models (SDMs) are useful but largely under-utilized due to model uncertainty. We provide a case study that utilizes an ensemble modeling approach of two independently derived SDMs to explicitly address common modeling impediments and...
Recent sandy deposits at five northern California coastal wetlands — Stratigraphy, diatoms, and implications for storm and tsunami hazards
Eileen Hemphill-Haley, Harvey M. Kelsey, Nicholas Graehl, Michael Casso, Dylan Caldwell, Casey Loofbourrow, Michelle Robinson, Jessica Vermeer, Edward Southwick
2019, Scientific Investigations Report 2018-5111
A recent geological record of inundation by tsunamis or storm surges is evidenced by deposits found within the first few meters of the modern surface at five wetlands on the northern California coast. The study sites include three locations in the Crescent City area (Marhoffer Creek marsh, Elk Creek wetland,...
Evaluating legacy effects of hyperabundant white-tailed deer (Odocoileus virginianus) in forested stands of Harriman and Bear Mountain State Parks, New York
Chellby R. Kilheffer, H. Brian Underwood, Donald J. Leopold, Rachel Guerrieri
2019, Open-File Report 2019-1116
Executive SummaryWhite-tailed deer (Odocoileus virginianus) are among the most impactful herbivores in the eastern United States. Legacy forest effects, those accrued from intense herbivory over time, manifest as low seedling regeneration, high cover of plant species that are infrequently browsed by deer, presence or expansion of nonnative or invasive plant...
Multiorder hydrologic position in the conterminous United States: A set of metrics in support of groundwater mapping at regional and national scales
Kenneth Belitz, Richard B. Moore, Terri Arnold, Jennifer B. Sharpe, J. Jeffrey Starn
2019, Water Resources Research (55) 11188-11207
The location of a point on the landscape within a stream network (hydrologic position) can be an important predictive measure in hydrology. Hydrologic position is defined here by two metrics: lateral position and distance from stream to divide, both measured horizontally. Lateral position (dimensionless) is the relative...
Machine learning classifiers for attributing tephra to source volcanoes: An evaluation of methods for Alaska tephras
Matthew Bolton, Britta Jensen, Kristi L. Wallace, Nore Praet, David Fortin, Darrell Kaufman, Marc De Batist
2019, Journal of Quaternary Science (35) 81-92
Glass composition-based correlations of volcanic ash (tephra) traditionally rely on extensive manual plotting. Many previous statistical methods for testing correlations are limited by using geochemical means, masking diagnostic variability. We suggest that machine learning classifiers can expedite correlation, quickly narrowing the list of likely candidates...
Overall methodology design for the United States National Land Cover Database 2016 products
Suming Jin, Collin Homer, Limin Yang, Patrick Danielson, Jon Dewitz, Congcong Li, Zhe Zhu, George Z. Xian, Danny Howard
2019, Remote Sensing (11)
The National Land Cover Database (NLCD) 2016 provides a suite of data products, including land cover and land cover change of the conterminous United States from 2001 to 2016, at two- to three-year intervals. The development of this product is part of an effort to meet the growing demand...
Morphodynamic modelling of the wilderness breach, Fire Island, New York. Part I: Model set-up and validation
Maarten van Ormondt, Timothy Nelson, Cheryl Hapke, Dano Roelvink
2019, Coastal Engineering (157)
On October 29, 2012, storm surge and large waves produced by Hurricane 13 Sandy resulted in the formation of a breach in eastern Fire Island, NY. The goals of this study 14 are to gain a better understanding of the physical processes that govern breach behavior and 15 to assess...
Species recovery and recolonization of past habitats: Lessons for science and conservation from sea otters in estuaries
Brent B. Hughes, Kerstin Wasson, M. Tim Tinker, Susan L Williams, Lilian P. Carswell, Katharyn E. Boyer, Michael W. Beck, Ron Eby, Robert Scoles, Michelle M. Staedler, Sarah Espinosa, Margot Hessing-Lewis, Erin U. Foster, Kathryn Beheshti, Tracy M Grimes, Benjamin H. Becker, Lisa Needles, Joseph A. Tomoleoni, Jane Rudebusch, Ellen Marie Hines, Brian R Silliman
2019, PeerJ (7)
Recovering species are often limited to much smaller areas than they historically occupied. Conservation planning for the recovering species is often based on this limited range, which may simply be an artifact of where the surviving population persisted. Southern sea otters (Enhydra lutris nereis) were hunted nearly to extinction but...
Is the timing, pace and success of the monarch migration associated with sun angle?
Orley R. Taylor, James P Lovett, David L Gibo, Emily L. Weiser, Wayne E. Thogmartin, Darius J. Semmens, James E. Diffendorfer, John M. Pleasants, Samuel Pecoraro, Ralph Grundel
2019, Frontiers in Ecology and Evolution (7)
A basic question concerning the monarch butterfly’s fall migration is which monarchs succeed in reaching overwintering sites in Mexico, which fail—and why. We document the timing and pace of the fall migration, ask whether the sun’s position in the sky is associated with the pace of the migration, and whether...
Trends in streamflow and concentrations and flux of nutrients and total suspended solids in the Upper White River at Muncie, near Nora, and near Centerton, Indiana
G. F. Koltun
2019, Scientific Investigations Report 2019-5119
The U.S. Geological Survey (USGS), in cooperation with The Nature Conservancy, completed a study to estimate and assess trends in streamflow and annual mean concentrations and flux of nutrients (nitrate plus nitrite, total Kjeldahl nitrogen, and total phosphorus) and total suspended solids at three USGS streamgages (hereafter referred to as “study...
The emissions of CO2 and other volatiles from the world’s subaerial volcanoes
Tobias P. Fischer, Santiago Arellano, Simon Carn, Alessandro Aiuppa, Bo Galle, Patrick Allard, Taryn Lopez, Hiroshi Shinohara, Peter J. Kelly, Cynthia Werner, Carlo Cardelini, Giovanni Chiodini
2019, Scientific Reports (9)
Volcanoes are the main pathway to the surface for volatiles that are stored within the Earth. Carbon dioxide (CO2) is of particular interest because of its potential for climate forcing. Understanding the balance of CO2 that is transferred from the Earth’s surface to the Earth’s interior, hinges on accurate quantification of...
Multi-resource analysis: A proof of concept study of natural resource tradeoffs in the Piceance Basin, Colorado, using the net resources assessment (NetRA) decision support tool
Richard Bernknopf, Craig Broadbent, Dadhi Adhikari, Saleh Mamun, Vince Tidwell, Christopher Babis, Emily Pindilli
2019, Scientific Investigations Report 2019-5086
Executive SummaryThe U.S. Geological Survey (USGS) is developing a multi-resource analysis (MRA) line of products to inform land-use decision makers. Specifically, MRA products will integrate scientific information, include considerations for natural resource interrelations, and quantify the effects of resource management decisions in biophysical, economic, and societal terms. As part of...
Network controls on mean and variance of nitrate loads from the Mississippi River to the Gulf of Mexico
John T. Crawford, Edward G. Stets, Lori A. Sprague
2019, Journal of Environmental Quality (48) 1789-1799
Excessive nitrate loading to the Gulf of Mexico (GoM) has caused widespread hypoxia over many decades. Despite recent reductions in nitrate loads observed at local scales, decreases in nitrate loading from the MRB to the GoM have been small (1.58 % during 2002-2012) with a low level of analytical confidence...
A comparison of hydrocarbon-related landscape disturbance patterns along the New York-Pennsylvania border, 2004–2013
Coral M. Howe, Lesley E. Milheim, E. Terrence Slonecker, Siddiq Kalaly, Joseph Chestnut
2019, Scientific Investigations Report 2019-5096
Executive SummaryThe New York-Pennsylvania area has a long history of hydrocarbon extraction, and the addition of shale gas extraction methods contributes to landscape disturbance borne by previously developed oil and non-shale gas resources. The main unconventional extraction method used to extract shale gas from the Marcellus Shale located in New...
Neotectonic and paleoseismic analysis of the northwest extent of Holocene surface deformation along the Meers Fault, Oklahoma
Kristofer T. Hornsby, Ashley R. Streig, S. Bennett, Jefferson C. Chang, Shannon A. Mahan
2019, Bulletin of the Seismological Society of America (110) 49-66
TheMeers fault (Oklahoma) is one of fewseismogenic structures with evidence for Holocene surface rupture in the stable continental region of North America. The 37-kilometer-long southeast section of the full 54-kilometer-long Meers fault is interpreted to be Holocene active. The 17-kilometer-long northwest section is considered Quaternary active, but not Holocene active.We reevaluate surface expression and...
Alkalinity in tidal tributaries of the Chesapeake Bay
Raymond G. Najjar, Maria Herrmann, Jaclyn R. Friedman, Marjorie A. M. Friedrichs, Lora A. Harris, Elizabeth H. Shadwick, Edward G. Stets, Ryan J. Woodland
2019, Journal of Geophysical Research C: Oceans (125)
Despite the important role of alkalinity in estuarine carbon cycling, the seasonal and decadal variability of alkalinity, particularly within multiple tidal tributaries of the same estuary, is poorly understood. Here we analyze more than 26,000 alkalinity measurements, mostly from the 1980s and 1990s, in the major tidal tributaries of the...