Invasive wild pig movement and space use in a mixed-use forest landscape, South Carolina
Erin K. Buchholtz, Andrew Jamison, Greg Yarrow
2025, Stacks Journal (2025)
Invasive wild pigs (Sus scrofa) pose considerable ecological and economic challenges across their introduced range, and understanding their spatial ecology is critical for management. This research and accompanying dataset represents adult wild pig movement in South Carolina, United States based on 16 individuals collared in 2023-2024. Using hourly GPS collar...
Status report on the Long-Term Experimental and Management Plan (LTEMP) Metrics for the Glen Canyon Dam adaptive management program
Helen C. Fairley, Gregory Mark Anderson, Andrew Alan Schultz, Joel B. Sankey, Joshua Caster, Lauren Lynn Tango, Bridget Deemer, Theodore Kennedy, Anya Metcalfe, Emily C. Palmquist, Maria C. Dzul, Kimberly L. Dibble, David Ward, David L. Rogowski, Emily C. Omana Smith, Jeffrey Arnold, Brian D. Healy, Charles B. Yackulic, Lucas Bair, David J. Topping, Paul Grams, Katherine Anne Chapman, Robert B. Tusso, Dale Fonken, Josh Korman, Lindsay Erika Hansen, Benjamin John Miller, John M. Fennell, Drew Elliot Eppehimer, Claudia James Dimartini, Nathaniel D. Bransky
2025, Report
No abstract available....
Gas chemistry and isotope data for volcano monitoring at the Lassen Volcanic Center, Lassen Volcanic National Park
Deborah Bergfeld, Jennifer L. Lewicki, Sara Peek, Andrew G. Hunt
2025, Open-File Report 2025-1056
This report presents chemical and isotopic compositions of volcanic gases collected from thermal areas within Lassen Volcanic National Park in northern California from 1974 through 2019. As the southernmost volcano in the Cascade Range and designated a very-high-threat volcano by the U.S. Geological Survey, the Lassen Volcanic Center (LVC) requires...
Achieving interpretable machine learning by functional decomposition of black-box models into explainable predictor effects
David Kohler, David Rügamer, Lindsey J. Boyle, Kelly O. Maloney, Matthias Schmid
2025, npj Artificial Intelligence (1)
Machine learning (ML) models are often based on complex black-box architectures that are difficult to interpret. This interpretability problem can hinder the use of ML in fields like medicine, ecology, and insurance, and has boosted research in interpretable machine learning (IML). Here, we propose a novel approach for the functional...
Longer exposure to warm water increases subsequent thermal tolerance of brook trout in cold water: Acclimation timing and physiology
Amy M. Regish, Matthew O’Donnell, Benjamin Letcher, Timothy Lambert, Daniel J. Hall, Stephen D. McCormick
2025, Conservation Physiology (13)
Climate change has resulted in increased incidence and variability of warming episodes in cold-water streams that support salmonids. The capacity to acclimate to warm temperatures may allow cold-water fish to persist in spite of changing thermal regimes, but accurately predicting fish performance under fluctuating stream temperatures also requires understanding re-acclimation...
Aggregating three sources of long-term trends of swallows and martins to identify priority conservation areas in the Great Lakes region
Maria C.T.D. Belotti, Brian Daniel Gerber, Wenlong Zhao, Yuting Deng, Victoria F. Simons, Gustavo Perez, Jeffrey F. Kelly, Subhransu Maji, Daniel Sheldon, Kyle G. Horton
2025, Journal of Applied Ecology (63)
1. Long-term monitoring of bird populations across scales is important in evaluating conservation targets and creating effective conservation strategies. For nearly six decades, the Breeding Bird Survey (BBS) has served as the primary broad-scaled source of relative abundance trends of swallows and martins in North America. Recently, however, it has...
Viral outbreak dynamics and evolution in wildlife at the interface with humans
Rachael Marie Giglio, Aaron Westmoreland, Mark Q. Wilber, Grete WIlson-Henjum, Aung Nyein Chan, Billy Gardner, Wantida Horpiencharoen, Roderick B. Gagne, Avery M. Corondi, Alec Baker, Matthew A. Combs, Jefferey Chandler, Kezia R. Manlove, Kim M. Pepin, W. David Walter
2025, Biology Letters (21)
In this study, we used a multi-faceted approach to understand patterns of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission and persistence in a wild white-tailed deer (Odocoileus virginianus) population. Serology data indicated transmission of SARS-CoV-2 and persistence during the seven-month sampling period. Traditional disease modelling based...
Rapid structured decision making for Hypomesus transpacificus (delta smelt) summer–fall freshwater outflow management
Brian D. Healy, Corey C. Phillis, Brian Mahardja, Cameron Koizumi, Catarina Pien, Nancy Parker, J. Louise Conrad, Julie Ekstrom, Julie Leimbach, Rafael Silberblatt, Tom Fischer, Chase Ehlo
2025, Open-File Report 2025-1055
Managers of the Central Valley Project (CVP) and State Water Projects (SWP) in California are confronted with difficult tradeoffs between water uses and associated values affected by water management decisions. These decisions involve altering the timing and magnitude of water releases from dams and reservoirs, which can affect habitats for...
USGS—An Unparalleled Scientific Asset
Shonte Jenkins, Emily Pindilli, David Applegate, Rachel E. Reagan
2025, General Information Product 263
The U.S. Geological Survey (USGS) delivers information critical to powering our economy, managing our natural resources, and keeping Americans safe and healthy.1Mapping the Nation$21B Geologic maps save users an estimated 15% in annual costs: a value of between $14B and $21B.$25.6B is the annual value to users of key Earth observation platforms...
Interaction strength and harvest intensity mediate predator–prey dynamics on coral reefs
Sophia A. Rahnke, Winter. Kawika B., Lillian Joy Tuttle Raz, Lisa C. McManus
2025, Ecosphere (16)
Understanding predator–prey relationships is fundamental to our knowledge of the stability and resilience of ecological systems. These dynamics are shaped by both ecological factors, like interaction strength, and anthropogenic factors, like harvest intensity, which can have large-scale implications for community structure. However, few studies have focused on the combined impact...
Memory and jamming in fault zone sediments
Jhardel Dasent, Vashan Wright, Katherine M. Scharer, Michael Manga, Richard Kilburn
2025, Communications Earth & Environment (6)
Many subsurface processes involve transitions in granular material states, from arrested to creeping to flowing. Experiments and frameworks for idealized systems reveal that granular fabrics develop during shearing, co-evolve with applied stress, and govern such transitions. We use microtomography to test whether fabrics at two San Andreas fault sites reflect...
Conceptual and numerical groundwater flow model of the Iowa River alluvial aquifer near Tama County, Iowa, 1980 through 2022
Kendall M.F. Goldstein, Kyle W. Davis
2025, Scientific Investigations Report 2025-5086
The Iowa River alluvial aquifer is an important source of water on the Meskwaki Settlement in Tama County, Iowa, which is land owned by the Sac & Fox Tribe of the Mississippi in Iowa (commonly known as the Meskwaki Nation). The U.S. Geological Survey constructed a groundwater flow model, including...
Approximate inland extent of saltwater intrusion at the base of the Biscayne aquifer, Miami-Dade County, Florida, 2022
Jade Ziqiu Zhang, Corinne Renshaw
2025, Scientific Investigations Map 3541
Miami-Dade County is part of a densely populated urban corridor in southeastern Florida. The Biscayne aquifer serves as Miami-Dade County’s primary drinking water source and is characterized by highly permeable karstic limestone and carbonate sand. The aquifer’s coastal location and permeable nature make it susceptible to saltwater intrusion. Monitoring the...
Harmonization of a water withdrawal dataset for the conterminous United States
Carol L. Luukkonen, Ayman H. Alzraiee, Deidre M. Herbert, Richard G. Niswonger, Joshua Larsen, Cheryl A. Buchwald, Natalie Houston, Cheryl A. Dieter, Lisa D. Miller, Jana S. Stewart
2025, JAWRA Journal of the American Water Resources Association (61)
The U.S. Geological Survey is developing nationally consistent water-use modeling approaches to replace previous methods relying on locally specific reported and estimated data. These national assessments require datasets that incorporate water withdrawal variability across the United States and over long periods. However, source data often have unclear definitions, missing or...
Rice cultivation supports growth and survival of a threatened semi-aquatic reptile
Jonathan P. Rose, Allison M. Nguyen, Anna Jordan, Daniel Antonio Macias, Elliot James Schoenig, Giancarlo Ray Napolitano, Richard Kim, Julia S.M. Ersan, Alexandria M. Fulton, Brian J. Halstead
2025, Ecological Applications (35)
Integration of agroecosystems and other working landscapes with protected lands and waters is critical to the conservation of Earth's biodiversity. Rice agroecosystems support many species by providing aquatic habitat where natural wetlands have been altered or drained. In regions with long dry seasons, rice fields and associated irrigation canals provide...
Seasonal movements of nonnative White Catfish in the Penobscot River estuary
Andrea N. Casey, Matthew A. Mensinger, Joseph D. Zydlewski
2025, North American Journal of Fisheries Management (45) 1211-1219
ObjectiveWhite Catfish Ameiurus catus has been introduced to coastal watersheds across the United States. In the Penobscot River, Maine, this species has become increasingly common in upstream habitats that have been made accessible by recent dam removals. We characterized the movements of White Catfish to understand the temporal...
Predicting sediment bulk density for San Francisco Estuary
Samantha C. McGill, Jessica R. Lacy
2025, San Francisco Estuary and Watershed Science (23)
Sediment bulk density (ρ-dry) and particle size are two important parameters for predicting sediment bed erosion. ρ-dry, however, is difficult to measure accurately. The units of ρdry have not been consistently reported in the literature, leading to confusion, particularly in the calculation of sediment budgets that typically require integrating mass-based...
Causal analysis of fire regime drivers in California
Jon Keeley, Alexandra D. Syphard
2025, International Journal of Wildland Fire (34)
BackgroundUnderstanding the relative contribution of climate and human factors to wildfires is critical for managing risk across California’s diverse ecosystems, in the United States (US).AimsWe propose a model that distinguishes between proximate and ultimate drivers of fire regimes and apply it to a century of fire and climate...
Geochemical and hydrological investigations of historical data collected at the Lee Acres Landfill and Giant Bloomfield Refinery, New Mexico, 1985–2020
Erin L. Gray, Christina L. Ferguson
2025, Scientific Investigations Report 2025-5091
The Lee Acres Landfill and Giant Bloomfield Refinery are adjacent properties near the City of Farmington, New Mexico, each having undergone monitoring and remediation related to historical site activities. At the landfill, site cleanup has included the installation of a capillary barrier over former liquid waste lagoons and periodic monitoring...
Biologging to identify nesting and non-nesting emergences for four species of imperiled sea turtles
Kristen Hart, Connor F. White, Donna J. Shaver, Margaret Lamont, Michael Cherkiss, Andrew G. Crowder, Nicholas M. Whitney
2025, Frontiers in Marine Science (12)
Quantifying sea turtle nesting behavior is essential for recovery planning and evaluating management actions. Traditional monitoring approaches, based on nest counts from beach surveys, can misclassify non-nesting emergences, obscure true fecundity, and underestimate clutch frequency, metrics that directly influence population models and regulatory decisions. Here, we demonstrate...
Exploring atmospheric deposition chemistry data across the United States
Ryan C. McCammon, Noel A. Deyette, Gregory A. Wetherbee
2025, Fact Sheet 2025-3041
The National Atmospheric Deposition Program (NADP) collects atmospheric data to monitor air pollution effects on the quality of United States water supplies and ecosystems. The NADP requires consistent data collection at fixed locations and is governed by a committee with participation by many Federal and State agencies, universities, Tribes, and private companies. NADP conducts a spring...
A summary of grizzly bear distribution in the lower-48 US states in 2024
Cecily M. Costello, Justin A. Dellinger, Jennifer K. Fortin-Noreus, Mark Haroldson, Bryn Karabensh, Wayne F. Kasworm, Lori L. Roberts, Justin E. Teisberg, Frank T. van Manen, Tyler J. Vent
2025, Report
Understanding the distribution of grizzly bear populations in the lower-48 states, is important for their conservation and management, and for public safety. Previously, our research teams working in grizzly bear ecosystems in the lower-48 states used varying methods to estimate distribution of grizzly bear populations. In the Greater Yellowstone Ecosystem...
Wetland hydrologic dynamics and duck productivity are declining in the Prairie Pothole Region, and they are linked
Michael J. Anteau, Michael L Szymanski, Aaron T. Pearse
2025, Environmental and Sustainability Indicators (29)
The Prairie Pothole Region (PPR) of North America is a globally important area hosting >50 % of North America’s breeding ducks. Ducks in the PPR depend on wetlands and grasslands which have experienced accelerated losses in extent and quality due to agriculture. While other bird populations have declined,...
Early season tropical cyclones affect birds breeding on a barrier island
Theodore J. Zenzal Jr., Amanda Nicole Anderson, Brock Geary, Jessica Schulz, Robert C. Dobbs, Wylie C. Barrow, Hardin Waddle
2025, Gulf and Caribbean Research (36) 38-48
Animal populations often experience acute natural disturbances, most of which are connected to short—term weather events. Occurrences of early—season tropical cyclones during the peak of the avian breeding season are likely to increase with climate change, which can substantially impact populations of coastal breeding birds at multiple scales. To understand...
Designs for cyanobacterial harmful algal bloom monitoring in the Sacramento–San Joaquin Delta, California
Keith Bouma-Gregson, Lisa Lucas, Andrea Cecile Jaegge, Dulcinea Marie Avouris, Emily T. Richardson, Jacob Aaron Zwart, Tamara E. C. Kraus
2025, Preprint
Cyanobacterial harmful algal blooms (CHABs) are a growing concern in freshwater environments. These blooms can lead to degraded water quality, ecosystem disruptions, and public health threats due to the production of potent cyanotoxins. The Sacramento–San Joaquin Delta (California, USA; the Delta) has experienced CHABs since 1999, including CHABs that produce...
