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Changes in aquatic vegetation and floodplain land cover in the Upper Mississippi and Illinois rivers (1989–2000–2010)
Nathan R. De Jager, Jason J. Rohweder
2017, Environmental Monitoring and Assessment (189) 1-14
Quantifying changes in the cover of river-floodplain systems can provide important insights into the processes that structure these landscapes as well as the potential consequences to the ecosystem services they provide. We examined net changes in 13 different aquatic and floodplain land cover classes using photo interpreted maps of the...
Inhibition of an aquatic rhabdovirus demonstrates promise of a broad-spectrum antiviral for use in aquaculture
Bethany F. Balmer, Rachel L. Powers, Ting-Hu Zhang, Jihye Lee, Frederic Vigant, Benhur Lee, Michael E. Jung, Maureen K. Purcell, Kevin Snekvik, Hector C. Aguilar
2017, Journal of Virology (91)
Many enveloped viruses cause devastating disease in aquaculture, resulting in significant economic impact. LJ001 is a broad-spectrum antiviral compound that inhibits enveloped virus infections by specifically targeting phospholipids in the lipid bilayer via the production of singlet oxygen (1O2). This stabilizes positive curvature and decreases membrane fluidity, which inhibits virus-cell...
Flood-inundation maps for the St. Joseph River at Elkhart, Indiana
Zachary W. Martin
2017, Scientific Investigations Report 2016-5179
Digital flood-inundation maps for a 6.6-mile reach of the St. Joseph River at Elkhart, Indiana, were created by the U.S. Geological Survey (USGS) in cooperation with the Indiana Office of Community and Rural Affairs. The flood-inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site...
Tracer-based characterization of hyporheic exchange and benthic biolayers in streams
Julia L.A. Knapp, Ricardo Gonzalez-Pinzon, Jennifer D. Drummond, Laurel G. Larsen, Olaf A. Cirpka, Judson W. Harvey
2017, Water Resources Research (53) 1575-1594
Shallow benthic biolayers at the top of the streambed are believed to be places of enhanced biogeochemical turnover within the hyporheic zone. They can be investigated by reactive stream tracer tests with tracer recordings in the streambed and in the stream channel. Common in-stream measurements of such reactive tracers cannot...
Multi-year microbial source tracking study characterizing fecal contamination in an urban watershed
Rebecca N. Bushon, Amie M.G. Brady, Eric D. Christensen, Erin A. Stelzer
2017, Water Environment Research (89) 127-143
Microbiological and hydrological data were used to rank tributary stream contributions of bacteria to the Little Blue River in Independence, Missouri. Concentrations, loadings and yields of E. coli and microbial source tracking (MST) markers, were characterized during base flow and storm events in five subbasins within Independence, as well as...
Nonbreeding isolation and population-specific migration patterns among three populations of Golden-winged Warblers
Gunnar R. Kramer, Henry M. Streby, Sean M. Peterson, Justin A. Lehman, David A. Buehler, Petra B. Wood, Darin J. McNeil Jr., Jeffrey L. Larkin, David E. Andersen
2017, Condor (119) 108-121
Golden-winged Warblers (Vermivora chrysoptera) are Nearctic–Neotropical migrants experiencing varied regional population trends not fully explained by breeding-grounds factors such as nest success. A lack of detailed information on the nonbreeding distributions, migration routes, or timing of migration among populations hampers our ability to identify population processes outside the breeding period....
Evolutionary and functional mitogenomics associated with the genetic restoration of the Florida panther
Alexander Ochoa, David P. Onorato, Robert R. Fitak, Melody Roelke-Parker, Melanie Culver
2017, Journal of Heredity (108) 449-455
Florida panthers are endangered pumas that currently persist in reduced patches of habitat in South Florida, USA. We performed mitogenome reference-based assemblies for most parental lines of the admixed Florida panthers that resulted from the introduction of female Texas pumas into South Florida in 1995. With the addition of 2...
Evaluating simplistic methods to understand current distributions and forecast distribution changes under climate change scenarios: An example with coypu (Myocastor coypus)
Catherine S. Jarnevich, Nicholas E. Young, Trevor R. Sheffels, Jacoby Carter, Mark D. Systma, Colin Talbert
2017, NeoBiota (32) 107-125
Invasive species provide a unique opportunity to evaluate factors controlling biogeographic distributions; we can consider introduction success as an experiment testing suitability of environmental conditions. Predicting potential distributions of spreading species is not easy, and forecasting potential distributions with changing climate is even more difficult. Using the globally invasive coypu...
Paleoseismic potential of sublacustrine landslide records in a high-seismicity setting (south-central Alaska)
Nore Praet, Jasper Moernaut, Maarten Van Daele, Evelien Boes, Peter J. Haeussler, Michael Strupler, Sabine Schmidt, Michael G. Loso, Marc De Batist
2017, Marine Geology (384) 103-119
Sublacustrine landslide stratigraphy is considered useful for quantitative paleoseismology in low-seismicity settings. However, as the recharging of underwater slopes with sediments is one of the factors that governs the recurrence of slope failures, it is not clear if landslide deposits can provide continuous paleoseismic records in settings of frequent strong shaking. To...
Fish and invertebrate flow-biology relationships to support the determination of ecological flows for North Carolina
Jennifer Phelan, Thomas F. Cuffney, Lauren A. Patterson, Michele Eddy, Robert Dykes, Sam Pearsall, Chris Goudreau, Jim Mead, Fred Tarver
2017, Journal of the American Water Resources Association (53) 42-55
A method was developed to characterize fish and invertebrate responses to flow alteration in the state of North Carolina. This method involved using 80th percentile linear quantile regressions to relate six flow metrics to the diversity of riffle-run fish and benthic Ephemeroptera, Plecoptera, and Trichoptera (EPT) richness. All twelve flow-biology...
Temporal expansion of annual crop classification layers for the CONUS using the C5 decision tree classifier
Aaron M. Friesz, Bruce K. Wylie, Daniel M. Howard
2017, Remote Sensing Letters (8) 389-398
Crop cover maps have become widely used in a range of research applications. Multiple crop cover maps have been developed to suite particular research interests. The National Agricultural Statistics Service (NASS) Cropland Data Layers (CDL) are a series of commonly used crop cover maps for the conterminous United States (CONUS)...
Building the vegetation drought response index for Canada (VegDRI-Canada) to monitor agricultural drought: first results
Tsegaye Tadesse, Catherine Champagne, Brian D. Wardlow, Trevor A. Hadwen, Jesslyn F. Brown, Getachew B. Demisse, Yared A. Bayissa, Andrew M. Davidson
2017, GIScience and Remote Sensing (54) 230-257
Drought is a natural climatic phenomenon that occurs throughout the world and impacts many sectors of society. To help decision-makers reduce the impacts of drought, it is important to improve monitoring tools that provide relevant and timely information in support of drought mitigation decisions. Given that drought is a complex...
Using diurnal temperature signals to infer vertical groundwater-surface water exchange
Dylan J. Irvine, Martin A. Briggs, Laura K. Lautz, Ryan P. Gordon, Jeffrey M. McKenzie, Ian Cartwright
2017, Groundwater (55) 10-26
Heat is a powerful tracer to quantify fluid exchange between surface water and groundwater. Temperature time series can be used to estimate pore water fluid flux, and techniques can be employed to extend these estimates to produce detailed plan-view flux maps. Key advantages of heat tracing include cost-effective sensors and...
Integration of genetic and demographic data to assess population risk in a continuously distributed species
Bradley C. Fedy, Jeffery R. Row, Sara J. Oyler-McCance
2017, Conservation Genetics (18) 89-104
The identification and demographic assessment of biologically meaningful populations is fundamental to species’ ecology and management. Although genetic tools are used frequently to identify populations, studies often do not incorporate demographic data to understand their respective population trends. We used genetic data to define subpopulations in a continuously distributed...
A land data assimilation system for sub-Saharan Africa food and water security applications
Amy McNally, Kristi Arsenault, Sujay Kumar, Shraddhanand Shukla, Pete Peterson, Shugong Wang, Chris Funk, Christa Peters-Lidard, James Verdin
2017, Scientific Data (4) 1-19
Seasonal agricultural drought monitoring systems, which rely on satellite remote sensing and land surface models (LSMs), are important for disaster risk reduction and famine early warning. These systems require the best available weather inputs, as well as a long-term historical record to contextualize current observations. This article introduces the Famine...
Quaternary displacement rates on the Meeman‐Shelby fault and Joiner ridge horst, eastern Arkansas: Results from coring Mississippi River alluvium
Alex Ward, Ronald C. Counts, Roy Van Arsdale, Daniel Larsen, Shannon A. Mahan
2017, Seismological Research Letters (88) 442-455
This research used coring and optically stimulated luminescence (OSL) dating of displaced, deeply buried Quaternary alluvium to determine vertical displacement rates for the Meeman‐Shelby fault and the Joiner ridge horst, two structures in northeastern Arkansas that have no modern seismicity associated with them. We drilled continuous cores of the entire...
Population genetics and demography unite ecology and evolution
Winsor H. Lowe, Ryan Kovach, Fred W. Allendorf
2017, Trends in Ecology and Evolution (32) 141-152
The interplay of ecology and evolution has been a rich area of research for decades. A surge of interest in this area was catalyzed by the observation that evolution by natural selection can operate at the same contemporary timescales as ecological dynamics. Specifically, recent eco-evolutionary...
Human health screening and public health significance of contaminants of emerging concern detected in public water supplies
Robert Benson, Octavia D. Conerly, William Sander, Angela L. Batt, J. Scott Boone, Edward T. Furlong, Susan T. Glassmeyer, Dana W. Kolpin, Heath Mash
2017, Science of Total Environment (579) 1643-1648
The source water and treated drinking water from twenty five drinking water treatment plants (DWTPs) across the United States were sampled in 2010–2012. Samples were analyzed for 247 contaminants using 15 chemical and microbiological methods. Most of these contaminants are not regulated currently either in drinking water or in discharges...
Generation of 3-D hydrostratigraphic zones from dense airborne electromagnetic data to assess groundwater model prediction error
Nikolaj K Christensen, Burke J. Minsley, Steen Christensen
2017, Water Resources Research (53) 1019-1038
We present a new methodology to combine spatially dense high-resolution airborne electromagnetic (AEM) data and sparse borehole information to construct multiple plausible geological structures using a stochastic approach. The method developed allows for quantification of the performance of groundwater models built from different geological realizations of structure. Multiple structural realizations...
Modeling strong‐motion recordings of the 2010 Mw 8.8 Maule, Chile, earthquake with high stress‐drop subevents and background slip
Arthur D. Frankel
2017, Bulletin of the Seismological Society of America (107) 372-386
Strong‐motion recordings of the Mw 8.8 Maule earthquake were modeled using a compound rupture model consisting of (1) a background slip distribution with large correlation lengths, relatively low slip velocity, and long peak rise time of slip of about 10 s and (2) high stress‐drop subevents (asperities) on the deeper portion of the rupture...
A discrete stage-structured model of California newt population dynamics during a period of drought
Marjorie T. Jones, William R. Milligan, Lee B. Kats, Thomas L. Vandergon, Rodney L. Honeycutt, Robert N. Fisher, Courtney L. Davis, Timothy A. Lucas
2017, Journal of Theoretical Biology (414) 245-253
We introduce a mathematical model for studying the population dynamics under drought of the California newt (Taricha torosa), a species of special concern in the state of California. Since 2012, California has experienced a record-setting drought, and multiple studies predict drought conditions currently underway will persist and even increase in...
Managing American Oystercatcher (Haematopus palliatus) population qrowth by targeting nesting season vital rates
Shilo K. Felton, Nathan J. Hostetter, Kenneth H. Pollock, Theodore R. Simons
2017, Waterbirds (40) 44-54
In populations of long-lived species, adult survival typically has a relatively high influence on population growth. From a management perspective, however, adult survival can be difficult to increase in some instances, so other component rates must be considered to reverse population declines. In North Carolina, USA, management to conserve the...
Suppression of invasive lake trout in an isolated backcountry lake in Glacier National Park
C. R. Fredenberg, Clint C. Muhlfeld, Christopher S. Guy, Vincent S. D'Angelo, Christopher C. Downs, John M. Syslo
2017, Fisheries Management and Ecology (24) 33-48
Fisheries managers have implemented suppression programmes to control non-native lake trout, Salvelinus namaycush (Walbaum), in several lakes throughout the western United States. This study determined the feasibility of experimentally suppressing lake trout using gillnets in an isolated backcountry lake in Glacier National Park, Montana, USA, for the conservation of threatened...
The American Oystercatcher (Haematopus palliatus) Working Group: 15 years of collaborative focal species research and management
Theodore R. Simons
2017, Waterbirds (40) 1-9
The American Oystercatcher (Haematopus palliatus) Working Group formed spontaneously in 2001 as coastal waterbird biologists recognized the potential for American Oystercatchers to serve as focal species for collaborative research and management. Accomplishments over the past 15 years include the establishment of rangewide surveys, color-banding protocols, mark-resight studies, a revision of...
Comparison of in vitro estrogenic activity and estrogen concentrations insource and treated waters from 25 U.S. drinking water treatment plants
Justin M. Conley, Nicola Evans, Heath Mash, Laura Rosenblum, Kathleen Schenck, Susan Glassmeyer, Edward T. Furlong, Dana W. Kolpin, Vickie S. Wilson
2017, Science of the Total Environment (579) 1610-1617
In vitro bioassays have been successfully used to screen for estrogenic activity in wastewater and surface water, however, few have been applied to treated drinking water. Here, extracts of source and treated water samples were assayed for estrogenic activity using T47D-KBluc cells and analyzed by liquid chromatography-Fourier transform mass spectrometry (LC-FTMS) for natural...