Mapping changing distributions of dominant species in oil-contaminated salt marshes of Louisiana using imaging spectroscopy
Michael Beland, Dar A. Roberts, Seth H. Peterson, Trent W. Biggs, Raymond F. Kokaly, Sarai Piazza, Keely L. Roth, Shruti Khanna, Susan L. Ustin
2016, Remote Sensing of Environment (182) 192-207
The April 2010 Deepwater Horizon (DWH) oil spill was the largest coastal spill in U.S. history. Monitoring subsequent change in marsh plant community distributions is critical to assess ecosystem impacts and to establish future coastal management priorities. Strategically deployed airborne imaging spectrometers, like the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS),...
SNP discovery in candidate adaptive genes using exon capture in a free-ranging alpine ungulate
Gretchen H. Roffler, Stephen J. Amish, Seth Smith, Ted F. Cosart, Marty Kardos, Michael K. Schwartz, Gordon Luikart
2016, Molecular Ecology Resources (16) 1147-1164
Identification of genes underlying genomic signatures of natural selection is key to understanding adaptation to local conditions. We used targeted resequencing to identify SNP markers in 5321 candidate adaptive genes associated with known immunological, metabolic and growth functions in ovids and other ungulates. We selectively targeted 8161 exons in protein-coding...
Forward modeling of gravity data using geostatistically generated subsurface density variations
Geoffrey Phelps
2016, Geophysics (81) G81-G94
Using geostatistical models of density variations in the subsurface, constrained by geologic data, forward models of gravity anomalies can be generated by discretizing the subsurface and calculating the cumulative effect of each cell (pixel). The results of such stochastically generated forward gravity anomalies can be compared with the observed gravity...
Carbon and oxygen isotopic composition of coal and carbon dioxide derived from laboratory coal combustion: A preliminary study
Peter D. Warwick, Leslie F. Ruppert
2016, International Journal of Coal Geology (166) 128-135
The concentration of carbon dioxide (CO2) in the atmosphere has dramatically increased from the start of the industrial revolution in the mid-1700s to present levels exceeding 400 ppm. Carbon dioxide derived from fossil fuel combustion is a greenhouse gas and a major contributor to on-going climate change. Carbon and oxygen...
Shale gas development effects on the songbird community in a central Appalachian forest
Laura S. Farwell, Petra Wood, James Sheehan, Gregory A. George
2016, Biological Conservation (201) 78-91
In the last decade, unconventional drilling for natural gas from the Marcellus-Utica shale has increased exponentially in the central Appalachians. This heavily forested region contains important breeding habitat for many neotropical migratory songbirds, including several species of conservation concern. Our goal was to examine effects of unconventional gas development on...
A strategy for recovering continuous behavioral telemetry data from Pacific walruses
Anthony S. Fischbach, Chadwick V. Jay
2016, Wildlife Society Bulletin (40) 599-604
Tracking animal behavior and movement with telemetry sensors can offer substantial insights required for conservation. Yet, the value of data collected by animal-borne telemetry systems is limited by bandwidth constraints. To understand the response of Pacific walruses (Odobenus rosmarus divergens) to rapid changes in sea ice availability, we required continuous...
Life history characteristics and vital rates of Yellowstone Cutthroat Trout in two headwater basins
Patrick Uthe, Robert K. Al-Chokhachy, Alexander V. Zale, Bradley B. Shepard, Thomas E. McMahon, Tracy Stephens
2016, North American Journal of Fisheries Management (36) 1240-1253
The Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri is native to the Rocky Mountains and has declined in abundance and distribution as a result of habitat degradation and introduced salmonid species. Many of its remaining strongholds are in headwater basins with minimal human disturbances. Understanding the life histories, vital rates, and...
Invariant polar bear habitat selection during a period of sea ice loss
Ryan H. Wilson, Eric V. Regehr, Karyn D. Rode, Michelle St. Martin
2016, Proceedings of the Royal Society B: Biological Sciences (283)
Climate change is expected to alter many species' habitat. A species' ability to adjust to these changes is partially determined by their ability to adjust habitat selection preferences to new environmental conditions. Sea ice loss has forced polar bears (Ursus maritimus) to spend longer periods annually over less productive waters,...
Safety of the molluscicide Zequanox (R) to nontarget macroinvertebrates Gammarus lacustris (Amphipoda: Gammaridae) and Hexagenia spp. (Ephemeroptera: Ephemeridae)
Diane L. Waller, James A. Luoma, Richard A. Erickson
2016, Management of Biological Invasions (7) 269-280
Zequanox® is a commercial formulation of the killed bacterium, Pseudomonas fluorescens (strain CL145A), that was developed to control dreissenid mussels. In 2014, Zequanox became the second product registered by the United States Environmental Protection Agency (USEPA) for use in open water environments as a molluscicide. Previous nontarget studies demonstrated the...
Documentation of a groundwater flow model developed to assess groundwater availability in the Northern Atlantic Coastal Plain aquifer system from Long Island, New York, to North Carolina
John P. Masterson, Jason P. Pope, Michael N. Fienen, Jack Monti, Jr., Mark R. Nardi, Jason S. Finkelstein
2016, Scientific Investigations Report 2016-5076
The U.S. Geological Survey developed a groundwater flow model for the Northern Atlantic Coastal Plain aquifer system from Long Island, New York, to northeastern North Carolina as part of a detailed assessment of the groundwater availability of the area and included an evaluation of how these resources have changed over...
Sustainability of groundwater supplies in the Northern Atlantic Coastal Plain aquifer system
John P. Masterson, Jason P. Pope
2016, Fact Sheet 2016-3046
Groundwater is the Nation’s principal reserve of freshwater. It provides about half our drinking water, is essential to food production, and facilitates business and industry in developing economic well-being. Groundwater is also an important source of water for sustaining the ecosystem health of rivers, wetlands, and estuaries throughout the country....
Regional chloride distribution in the Northern Atlantic Coastal Plain aquifer system from Long Island, New York, to North Carolina
Emmanuel G. Charles
2016, Scientific Investigations Report 2016-5034
The aquifers of the Northern Atlantic Coastal Plain are the principal source of water supply for the region’s nearly 20 million residents. Water quality and water levels in the aquifers, and maintenance of streamflow, are of concern because of the use of this natural resource for water supply and because...
Assessment of groundwater availability in the Northern Atlantic Coastal Plain aquifer system From Long Island, New York, to North Carolina
John P. Masterson, Jason P. Pope, Michael N. Fienen, Jack Monti, Jr., Mark R. Nardi, Jason S. Finkelstein
2016, Professional Paper 1829
Executive SummaryThe U.S. Geological Survey began a multiyear regional assessment of groundwater availability in the Northern Atlantic Coastal Plain (NACP) aquifer system in 2010 as part of its ongoing regional assessments of groundwater availability of the principal aquifers of the Nation. The goals of this national assessment are to document...
Probabilistic assessment of erosion and flooding risk in the northern Gulf of Mexico
Nathaniel G. Plant, Thomas Wahl, Joseph W. Long
2016, Journal of Geophysical Research C: Oceans (121) 3029-3043
We assess erosion and flooding risk in the northern Gulf of Mexico by identifying interdependencies among oceanographic drivers and probabilistically modeling the resulting potential for coastal change. Wave and water level observations are used to determine relationships between six hydrodynamic parameters that influence total water level and therefore erosion and...
Model calibration criteria for estimating ecological flow characteristics
Marc Vis, Rodney Knight, Sandra Poole, William J. Wolfe, Jan Seibert
Lutz Breuer, Philipp Kraft, editor(s)
2016, Book chapter, Hydro-ecological modeling
Quantification of streamflow characteristics in ungauged catchments remains a challenge. Hydrological modeling is often used to derive flow time series and to calculate streamflow characteristics for subsequent applications that may differ from those envisioned by the modelers. While the estimation of model parameters for ungauged catchments is a challenging research...
Summer-autumn habitat use of yearling rainbow trout in two streams in the Lake Ontario watershed
James H. Johnson, James E. McKenna Jr., Marc Chalupnicki
2016, Open Fish Science Journal (9) 45-50
Understanding the habitat requirements of salmonids in streams is an important component of fisheries management. We examined the summer and autumn habitat use of yearling Rainbow Trout Oncorhynchus mykiss in relation to available habitat in two streams in the Lake Ontario watershed. Little interstream variation in trout habitat use was...
Temperature is better than precipitation as a predictor of plant community assembly across a dryland region
Bradley J. Butterfield, Seth M. Munson
2016, Journal of Vegetation Science (27) 938-947
QuestionHow closely do plant communities track climate? Research suggests that plant species converge toward similar environmental tolerances relative to the environments that they experience. Whether these patterns apply to severe environments or scale up to plant community-level patterns of relative climatic tolerances is poorly understood. Using estimates of species' climatic...
Approaches to stream solute load estimation for solutes with varying dynamics from five diverse small watershed
Brent T. Aulenbach, Douglas A. Burns, James B. Shanley, Ruth D. Yanai, Kikang Bae, Adam Wild, Yang Yang, Dong Yi
2016, Ecosphere (7)
Estimating streamwater solute loads is a central objective of many water-quality monitoring and research studies, as loads are used to compare with atmospheric inputs, to infer biogeochemical processes, and to assess whether water quality is improving or degrading. In this study, we evaluate loads and associated errors to determine the...
Methods for exploring uncertainty in groundwater management predictions
Joseph H. A. Guillaume, Randall J. Hunt, Alessandro Comunian, Baihua Fu, Rachel S Blakers
Anthony J. Jakeman, Olivier Barreteau, Randall J. Hunt, Jean-Daniel Rinaudo, Andrew Ross, editor(s)
2016, Book chapter, Integrated groundwater management
Models of groundwater systems help to integrate knowledge about the natural and human system covering different spatial and temporal scales, often from multiple disciplines, in order to address a range of issues of concern to various stakeholders. A model is simply a tool to express what we think we know....
Spatial distribution of thermokarst terrain in Arctic Alaska
Louise M. Farquharson, Daniel H. Mann, Guido Grosse, Benjamin M. Jones, Vladimir Romanovsky
2016, Geomorphology (273) 116-133
In landscapes underlain by ice-rich permafrost, the development of thermokarst landforms can have drastic impacts on ecosystem processes and human infrastructure. Here we describe the distribution of thermokarst landforms in the continuous permafrost zone of Arctic Alaska, analyze linkages to the underlying surficial geology, and discuss the vulnerability of different...
Streamflow of 2015—Water year national summary
Xiaodong Jian, David M. Wolock, Harry F. Lins, Steve Brady
2016, Fact Sheet 2016-3055
IntroductionThe maps and graphs in this summary describe national streamflow conditions for water year 2015 (October 1, 2014, to September 30, 2015) in the context of the 86-year period 1930–2015, unless otherwise noted. The illustrations are based on observed data from the U.S. Geological Survey’s (USGS) National Streamflow Information Program...
Grant opportunities for academic research and training
U.S. Geological Survey
2016, General Information Product 165
As an unbiased, multidisciplinary science organization, the U.S. Geological Survey (USGS) is dedicated to the timely, relevant, and impartial study of the health of our ecosystems and environment, our natural resources, the impacts of climate and land-use change, and the natural hazards that affect our lives. Grant opportunities for researchers...
Student and recent graduate employment opportunities
U.S. Geological Survey
2016, General Information Product 166
As an unbiased, multidisciplinary science organization, the U.S. Geological Survey (USGS) is dedicated to the timely, relevant, and impartial study of the health of our ecosystems and environment, our natural resources, the impacts of climate and land-use change, and the natural hazards that affect our lives. Opportunities for undergraduate and...
Key ecological responses to nitrogen are altered by climate change
T.L. Greaver, C.M. Clark, J.E. Compton, D. Vallano, A. F. Talhelm, C.P. Weaver, L.E. Band, Jill Baron, E.A. Davidson, C.L. Tague, E. Felker-Quinn, J.A. Lynch, J.D. Herrick, L. Liu, C.L. Goodale, K. J. Novak, R. A. Haeuber
2016, Nature Climate Change (6) 836-843
Climate change and anthropogenic nitrogen deposition are both important ecological threats. Evaluating their cumulative effects provides a more holistic view of ecosystem vulnerability to human activities, which would better inform policy decisions aimed to protect the sustainability of ecosystems. Our knowledge of the cumulative effects of these stressors is growing,...
Tumours in white suckers from Lake Michigan tributaries: Pathology and prevalence
Vicki S. Blazer, H.L. Walsh, R.P. Braham, C. M. Hahn, P. Mazik, P.B. McIntyre
2016, Journal of Fish Diseases (40) 377-393
The prevalence and histopathology of neoplastic lesions were assessed in white suckerCatostomus commersonii captured at two Lake Michigan Areas of Concern (AOCs), the Sheboygan River and Milwaukee Estuary. Findings were compared to those observed at two non-AOC sites, the Root and Kewaunee rivers. At each site, approximately 200 adult suckers...
