Predicting dietborne metal toxicity from metal influxes
M.-N. Croteau, S. N. Luoma
2009, Environmental Science & Technology (43) 4915-4921
Dietborne metal uptake prevails for many species in nature. However, the links between dietary metal exposure and toxicity are not well understood. Sources of uncertainty include the lack of suitable tracers to quantify exposure for metals such as copper, the difficulty to assess dietary processes such as food ingestion rate,...
Accretionary orogens through Earth history
Peter A. Cawood, A. Kroner, W.J. Collins, T.M. Kusky, Walter D. Mooney, B.F. Windley
2009, Geological Society Special Publication 1-36
Accretionary orogens form at intraoceanic and continental margin convergent plate boundaries. They include the supra-subduction zone forearc, magmatic arc and back-arc components. Accretionary orogens can be grouped into retreating and advancing types, based on their kinematic framework and resulting geological character. Retreating orogens (e.g. modern western Pacific) are undergoing long-term...
On selecting a prior for the precision parameter of Dirichlet process mixture models
R.M. Dorazio
2009, Journal of Statistical Planning and Inference (139) 3384-3390
In hierarchical mixture models the Dirichlet process is used to specify latent patterns of heterogeneity, particularly when the distribution of latent parameters is thought to be clustered (multimodal). The parameters of a Dirichlet process include a precision parameter ?? and a base probability measure G0. In problems where ?? is...
Geomorphic controls on mercury accumulation in soils from a historically mined watershed, Central California Coast Range, USA
J.M. Holloway, M. B. Goldhaber, J.M. Morrison
2009, Applied Geochemistry (24) 1538-1548
Historic Hg mining in the Cache Creek watershed in the Central California Coast Range has contributed to the downstream transport of Hg to the San Francisco Bay-Delta. Different aspects of Hg mobilization in soils, including pedogenesis, fluvial redistribution of sediment, volatilization and eolian transport were considered. The greatest soil concentrations...
An Integrated Social, Economic, and Ecologic Conceptual (ISEEC) framework for considering rangeland sustainability
W.E. Fox, D.W. McCollum, J.E. Mitchell, L.E. Swanson, U.P. Kreuter, J.A. Tanaka, G.R. Evans, Heintz H. Theodore, R.P. Breckenridge, P.H. Geissler
2009, Society and Natural Resources (22) 593-606
Currently, there is no standard method to assess the complex systems in rangeland ecosystems. Decision makers need baselines to create a common language of current rangeland conditions and standards for continued rangeland assessment. The Sustainable Rangeland Roundtable (SRR), a group of private and public organizations and agencies, has created a...
Divergence in an obligate mutualism is not explained by divergent climatic factors
W. Godsoe, Espen Strand, C.I. Smith, J.B. Yoder, T. C. Esque, O. Pellmyr
2009, New Phytologist (183) 589-599
Adaptation to divergent environments creates and maintains biological diversity, but we know little about the importance of different agents of ecological divergence. Coevolution in obligate mutualisms has been hypothesized to drive divergence, but this contention has rarely been tested against alternative ecological explanations. Here, we use a well-established example of...
Gene-expression signatures of Atlantic salmon's plastic life cycle
N. Aubin-Horth, B. H. Letcher, H.A. Hofmann
2009, General and Comparative Endocrinology (163) 278-284
How genomic expression differs as a function of life history variation is largely unknown. Atlantic salmon exhibits extreme alternative life histories. We defined the gene-expression signatures of wild-caught salmon at two different life stages by comparing the brain expression profiles of mature sneaker males and immature males, and early migrants...
Cahokia's boom and bust in the context of climate change
L. V. Benson, T. R. Pauketat, E.R. Cook
2009, American Antiquity (74) 467-483
During the early Mississippian Lohmann phase (A.D. 1050-1100), the American Bottom experienced a political and economic transformation. This transformation included the abrupt planned construction of central Cahokia, a large-scale influx of people to "downtown Cahokia," the abandonment of pre-Mississippian village settlements, the reorganization of farming in the Mississippi River floodplain,...
The 2007 southern California wildfires: Lessons in complexity
Jon E. Keeley, H. Safford, C. J. Fotheringham, J. Franklin, M. Moritz
2009, Journal of Forestry (107) 287-296
The 2007 wildfire season in southern California burned over 1,000,000 ac (∼400,000 ha) and included several megafires. We use the 2007 fires as a case study to draw three major lessons about wildfires and wildfire complexity in southern California. First, the great majority of large fires in southern California occur...
Turbulent stresses and secondary currents in a tidal-forced channel with significant curvature and asymmetric bed forms
D.A. Fong, Stephen G. Monismith, M.T. Stacey, J.R. Burau
2009, Journal of Hydraulic Engineering (135) 198-208
Acoustic Doppler current profilers are deployed to measure both the mean flow and turbulent properties in a channel with significant curvature. Direct measurements of the Reynolds stress show a significant asymmetry over the tidal cycle where stresses are enhanced during the flood tide and less prominent over...
Obtaining parsimonious hydraulic conductivity fields using head and transport observations: A Bayesian geostatistical parameter estimation approach
Michael N. Fienen, R. Hunt, D. Krabbenhoft, T. Clemo
2009, Water Resources Research (45)
Flow path delineation is a valuable tool for interpreting the subsurface hydrogeochemical environment. Different types of data, such as groundwater flow and transport, inform different aspects of hydrogeologic parameter values (hydraulic conductivity in this case) which, in turn, determine flow paths. This work combines flow and transport information to estimate...
Influences of wind-wave exposure on the distribution and density of recruit reef fishes at Kure and Pearl and Hermes Atolls, Northwestern Hawaiian Islands
E.E. DeMartini, B.J. Zgliczynski, R.C. Boland, A. M. Friedlander
2009, Environmental Biology of Fishes (85) 319-332
This paper describes the results of a field survey designed to test the prediction that the density of benthic juveniles of shallow-reef fishes is greater on wind-wave "exposed" sectors of a pair of isolated oceanic atolls (Kure, Pearl and Hermes) at the far northwestern end of the Hawaiian Islands, an...
Prominence of ichnologically influenced macroporosity in the karst Biscayne aquifer: Stratiform "super-K" zones
K.J. Cunningham, M.C. Sukop, H. Huang, P.F. Alvarez, H.A. Curran, R.A. Renken, J.F. Dixon
2009, Geological Society of America Bulletin (121) 164-180
A combination of cyclostratigraphic, ichnologic, and borehole geophysical analyses of continuous core holes; tracer-test analyses; and lattice Boltzmann flow simulations was used to quantify biogenic macroporosity and permeability of the Biscayne aquifer, southeastern Florida. Biogenic macroporosity largely manifests as: (1) ichnogenic macroporosity primarily related to postdepositional burrowing activity by callianassid...
Gas hydrate saturations estimated from fractured reservoir at Site NGHP-01-10, Krishna-Godavari Basin, India
Myung W. Lee, T. S. Collett
2009, Journal of Geophysical Research B: Solid Earth (114)
During the Indian National Gas Hydrate Program Expedition 01 (NGHP-Ol), one of the richest marine gas hydrate accumulations was discovered at Site NGHP-01-10 in the Krishna-Godavari Basin. The occurrence of concentrated gas hydrate at this site is primarily controlled by the presence of fractures. Assuming the resistivity of gas hydratebearing...
Climate alters response of an endemic island plant to removal of invasive herbivores
Mceachern A. Kathryn, D.M. Thomson, K.A. Chess
2009, Ecological Applications (19) 1574-1584
Islands experience higher rates of species extinction than mainland ecosystems, with biological invasions among the leading causes; they also serve as important model systems for testing ideas in basic and applied ecology. Invasive removal programs on islands are conservation efforts that can also be viewed as powerful manipulative experiments, but...
Phylogeny and phylogenetic classification of the antbirds, ovenbirds, woodcreepers, and allies (Aves: Passeriformes: Infraorder Furnariides)
R.G. Moyle, R.T. Chesser, R.T. Brumfield, J.G. Tello, D.J. Marchese, J. Cracraft
2009, Cladistics (25) 386-405
The infraorder Furnariides is a diverse group of suboscine passerine birds comprising a substantial component of the Neotropical avifauna. The included species encompass a broad array of morphologies and behaviours, making them appealing for evolutionary studies, but the size of the group (ca. 600 species) has limited well-sampled higher-level phylogenetic...
Assessment of tsunami hazard to the U.S. East Coast using relationships between submarine landslides and earthquakes
Uri S. ten Brink, H.J. Lee, E.L. Geist, D. Twichell
2009, Marine Geology (264) 65-73
Submarine landslides along the continental slope of the U.S. Atlantic margin are potential sources for tsunamis along the U.S. East coast. The magnitude of potential tsunamis depends on the volume and location of the landslides, and tsunami frequency depends on their recurrence interval. However, the size and recurrence interval of...
Laboratory and field testing of commercial rotational seismometers
R.L. Nigbor, J.R. Evans, C. R. Hutt
2009, Bulletin of the Seismological Society of America (99) 1215-1227
There are a small number of commercially available sensors to measure rotational motion in the frequency and amplitude ranges appropriate for earthquake motions on the ground and in structures. However, the performance of these rotational seismometers has not been rigorously and independently tested and characterized for earthquake monitoring purposes as...
Understanding differences between DELFT3D and empirical predictions of alongshore sediment transport gradients
Jeffrey H. List, Lindino Benedet, Daniel M. Hanes, Peter Ruggiero
2009, Conference Paper, Proceedings of the 31st International Conference, Coastal Engineering 2008
Predictions of alongshore transport gradients are critical for forecasting shoreline change. At the previous ICCE conference, it was demonstrated that alongshore transport gradients predicted by the empirical CERC equation can differ substantially from predictions made by the hydrodynamics-based model Delft3D in the case of a simulated borrow pit on the...
Task 1: Whole-body concentrations of elements in kelp bass (Paralabrax clathratus), kelp rockfish (Sebastes atrovirens), and Pacific sanddab (Citharichthys sordidus) from offshore oil platforms and natural areas in the Southern California Bight
Milton S. Love
2009, Report, Reproductive ecology and body burden of resident fish prior to decomissioning
Resource managers are concerned that offshore oil platforms in the Southern California Bight may be contributing to environmental contaminants accumulated by marine fishes. To examine this possibility, 18 kelp bass (Paralabrax clathratus), 80 kelp rockfish (Sebastes atrovirens), and 98 Pacific sanddab (Citharichthys sordidus) were collected from five offshore oil platforms...
The July-August 2008 hydrovolcanic eruption of Okmok Volcano, Umnak Island, Alaska
Christina A. Neal, Jessica F. Larsen, Janet Schaefer
2009, Alaska Geological Society Newsletter (39) 1-3
No abstract available...
Acquiring marine data in the Canada Basin, Arctic Ocean
Deborah Hutchinson, H.R. Jackson, J.W. Shimeld, C.B. Chapman, Jonathan R. Childs, T. Funck, R.W. Rowland
2009, Eos, Transactions, American Geophysical Union (90) 197-198
This article describes the logistical challenges and initial data sets from geophysical seismic reflection, seismic refraction, and hydrographic surveys in the Canada Basin conducted by scientists with U.S. and Canadian government agencies (Figure 1a) to fulfill the requirements of the United Nations Convention on the Law of the Sea to...
Monitoring and assessing trail conditions at Acadia National Park
Jeffrey L. Marion, Jeremy Wimpey, Logan Park
Robert E. Manning, editor(s)
2009, Book chapter, Parks and people: Managing outdoor recreation at Acadia National Park
No abstract available....
Seed reserves diluted during surface soil reclamation in eastern Mojave Desert
S. J. Scoles-Sciulla, L.A. DeFalco
2009, Arid Land Research and Management (23) 1-13
Surface soil reclamation is used to increase the re-establishment of native vegetation following disturbance through preservation and eventual replacement of the indigenous seed reserves. Employed widely in the mining industry, soil reclamation has had variable success in re-establishing native vegetation in arid and semi-arid regions. We tested whether variable success...
Integrating terrestrial LiDAR and stereo photogrammetry to map the Tolay lakebed in northern San Francisco Bay
Isa Woo, Rune Storesund Rune, John Y. Takekawa, Rachel J. Gardiner, Steve Ehret Steve
2009, Conference Paper, Planning for an uncertain future - Monitoring, integration, and adaptation
The Tolay Creek Watershed drains approximately 3,520 ha along the northern edge of San Francisco Bay. Surrounded by a mosaic of open space conservation easements and public wildlife areas, it is one of the only watersheds in this urbanized estuary that is protected from its headwaters to the bay. Tolay...