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Publication Extents

Not all publications have extents, not all extents are completely accurate
Challenges of forecasting flooding on coral reef–lined coasts
Curt D. Storlazzi
2018, Eos, Earth and Space Science News (99)
Understanding wave-driven coastal flooding is a challenging scientific problem; the need for forecasts is becoming more urgent because of sea level rise, climate change, and ever-growing coastal populations. The tools developed for sandy shorelines are generally not applicable to coral reef–lined coasts with their complex bathymetry, hydrodynamically rough reef platforms,...
Chronic wasting disease—Status, science, and management support by the U.S. Geological Survey
Christina M. Carlson, M. Camille Hopkins, Natalie T. Nguyen, Bryan J. Richards, Daniel P. Walsh, W. David Walter
2018, Open-File Report 2017-1138
The U.S. Geological Survey (USGS) investigates chronic wasting disease (CWD) at multiple science centers and cooperative research units across the Nation and supports the management of CWD through science-based strategies. CWD research conducted by USGS scientists has three strategies: (1) to understand the biology, ecology, and causes and distribution of...
Discovering the deep: Exploring remote Pacific marine protected areas
Amanda W.J. Demopoulos, Steven Auscavitch, Derek Sowers, Nikolai Pawlenko, Brian R. C. Kennedy
2018, Oceanography (31) 76-77
The 2017 Discovering the Deep expedition provided the first glimpse of the deep-sea geology and ecology of the deepwater regions of Swains Island, the Howland and Baker Islands Unit of PRIMNM, Phoenix Islands Protected Areas (PIPA), and the Tokelau Region (Figure 1). Prior to this expedition, virtually no visual reconnaissance...
Environmental, anthropogenic, and dietary influences on fine-scale movement patterns of Atlantic salmon through challenging waters
Andrew B. Harbicht, Theodore R. Castro-Santos, Dimitry Gorsky, D.M. Hand, D.J. Fraser, W.R. Ardren
2018, Canadian Journal of Fisheries and Aquatic Sciences (75) 2198-2210
Partial barriers to migration can affect migratory fish population dynamics and be influenced by many biotic, abiotic, and anthropogenic factors, including nutritional deficiencies. We investigated how such variables (including a thiamine deficiency) impact fine-scale movement of landlocked Atlantic salmon (Salmo salar) by treating returning spawners with thiamine and observing their...
Application of imaging spectroscopy for mineral exploration in Alaska: A study over porphyry Cu deposits in the eastern Alaska Range
Garth E. Graham, Raymond F. Kokaly, Karen D. Kelley, Todd M. Hoefen, Michaela Johnson, Bernard E. Hubbard
2018, Economic Geology (113) 489.-510
The U.S. Geological Survey tested the utility of imaging spectroscopy (also referred to as hyperspectral remote sensing) as an aid to regional mineral exploration efforts in remote parts of Alaska. Airborne imaging spectrometer data were collected in 2014 over unmined porphyry Cu deposits in...
Fire and climate suitability for woody vegetation communities in the south central United States
Esther Stroh, Matthew Struckhoff, Michael C. Stambaugh, Richard P. Guyette
2018, Fire Ecology (14) 106-124
Climate and fire are primary drivers of plant species distributions. Long-term management of south central United States woody vegetation communities can benefit from information on potential changes in climate and fire frequencies, and how these changes might affect plant communities. We used historical (1900 to 1929) and future (2040 to...
Rearing environment influences boldness and prey acquisition behavior, and brain and lens development of bull trout
William R. Brignon, Martin M. Pike, Lars O.E. Ebbesson, Howard A. Schaller, James T. Peterson, Carl B. Schreck
2018, Environmental Biology of Fishes (101) 383-401
Animals reared in barren captive environments exhibit different developmental trajectories and behaviors than wild counterparts. Hence, the captive phenotypes may influence the success of reintroduction and recovery programs for threatened and endangered species. We collected wild bull trout embryos from the Metolius River Basin, Oregon and reared them in differing...
Ecological drought: Accounting for the non-human impacts of water shortage in the Upper Missouri Headwaters Basin, Montana, USA
Jamie McEvoy, Deborah J. Bathke, Nina Burkardt, Amanda E. Cravens, Tonya Haigh, Kimberly R. Hall, Michael J. Hayes, Theresa Jedd, Marketa Podebradska, Elliot Wickham
2018, Resources (7) 1-16
Water laws and drought plans are used to prioritize and allocate scarce water resources. Both have historically been human-centric, failing to account for non-human water needs. In this paper, we examine the development of instream flow legislation and the evolution of drought planning to highlight the growing concern for the...
Adaptive influence of extrinsic and intrinsic factors on variation of incubation periods among tropical and temperate passerines
Thomas E. Martin, Riccardo Ton, Juan C. Oteyza
2018, The Auk (135) 101-113
Understanding intrinsic (physiological) and extrinsic (e.g., temperature) causes of variation in embryonic development time (incubation period) is important because they can have different impacts on individual quality. Robert Ricklefs and colleagues have argued that longer incubation periods result primarily from intrinsic physiological programs that increase individual quality and adult survival....
Technical note: False low turbidity readings from optical probes during high suspended-sediment concentrations
Nicholas Voichick, David J. Topping, Ronald E. Griffiths
2018, Hydrology and Earth System Sciences (22) 1767-1773
Turbidity, a measure of water clarity, is monitored for a variety of purposes including (1) to help determine whether water is safe to drink, (2) to establish background conditions of lakes and rivers and detect pollution caused by construction projects and stormwater discharge, (3) to study sediment transport in rivers and erosion in catchments, (4) to...
Molecular systematics and biodiversity of the Cryptotis mexicanus group (Eulipotyphla: Soricidae): two new species from Honduras supported
Amy B. Baird, Timothy J. McCarthy, Robert G. Trujillo, Yuan Yuan Kang, Mehdi Esmaeiliyan, Joselyn Valdez, Neal Woodman, John W. Bickham
2018, Systematics and Biodiversity (16) 108-117
Small-eared shrews of the genus Cryptotis (Mammalia: Eulipotyphla: Soricidae) are widespread in the northern Neotropics. Systematic studies of these shrews over the past two decades have revealed previously undocumented morphological and species diversity, resulting in a quadrupling of the number of recognized species. Unfortunately, a small proportion of the species in the...
Golden Eagle Monitoring Plan for the Desert Renewable Energy Conservation Plan
David Wiens, Patrick Kolar, Todd E. Katzner
2018, Report
This report describes options for monitoring the status and population trends of the golden eagle (Aquila chrysaetos) within the Desert Renewable Energy Conservation Plan (DRECP) area of Southern California in maintaining stable or increasing population in the planning area. The report profiles the ecology of golden eagles in the region...
Combining multiple sources of data to inform conservation of Lesser Prairie-Chicken populations
Beth Ross, David A. Haukos, Christian A. Hagen, James Pitman
2018, The Auk (135) 228-239
Conservation of small populations is often based on limited data from spatially and temporally restricted studies, resulting in management actions based on an incomplete assessment of the population drivers. If fluctuations in abundance are related to changes in weather, proper management is especially important, because extreme weather events could disproportionately...
U.S. Pacific coastal wetland resilience and vulnerability to sea-level rise
Karen M. Thorne, Glen M. MacDonald, Glenn R. Guntenspergen, Richard F. Ambrose, Kevin J. Buffington, Bruce D. Dugger, Chase M. Freeman, Christopher Janousek, Lauren N. Brown, Jordan A. Rosencranz, James Homquist, John P. Smol, Kathryn Hargan, John Y. Takekawa
2018, Science Advances (4)
We used a first-of-its-kind comprehensive scenario approach to evaluate both the vertical and horizontal response of tidal wetlands to projected changes in the rate of sea-level rise (SLR) across 14 estuaries along the Pacific coast of the continental United States. Throughout the U.S. Pacific region, we found that tidal wetlands...
Response of beach-nesting American Oystercatchers to off-road vehicles: An experimental approach reveals physiological nuances and decreased nest attendance
Shilo K. Felton, Kenneth H. Pollock, Theodore R. Simons
2018, The Condor (120) 47-62
Shorebird populations face increasing challenges as rising sea levels and growing human populations constrain their breeding habitats. On recreational beaches, the nesting season often coincides with a season of high visitor use, increasing the potential for conflict, which may negatively influence beach-nesting shorebird species. We designed a field experiment to...
Evidence for regional nitrogen stress on chlorophyll a in lakes across large landscape and climate gradients
Christopher T. Filstrup, Tyler Wagner, Samantha K. Oliver, Craig A. Stow, Katherine E. Webster, Emily H. Stanley, John A. Downing
2018, Limnology and Oceanography (63) S324-S339
Nitrogen (N) and phosphorus (P) commonly stimulate phytoplankton production in lakes, but recent observations from lakes from an agricultural region suggest that nitrate may have a subsidy‐stress effect on chlorophyll a (Chl a). It is unclear, however, how generalizable this effect might be. Here, we analyzed a large water quality dataset of 2385...
Stability and change in kelp forest habitats at San Nicolas Island
Michael C. Kenner, M. Tim Tinker
2018, Western North American Naturalist (78) 633-643
Kelp forest communities are highly variable over space and time. Despite this complexity it has been suggested that kelp forest communities can be classified into one of 2 states: kelp dominated or sea urchin dominated. It has been further hypothesized that these represent “alternate stable states” because a site can...
Drivers of variability in public‐supply water use across the contiguous United States
Scott C. Worland, Scott Steinschneider, George M. Hornberger
2018, Water Resources Research (54) 1868-1889
This study explores the relationship between municipal water use and an array of climate, economic, behavioral, and policy variables across the contiguous U.S. The relationship is explored using Bayesian‐hierarchical regression models for over 2,500 counties, 18 covariates, and three higher‐level grouping variables. Additionally, a second analysis is included for 83...
Environmental contaminants of health-care origin: Exposure and potential effects in wildlife
Thomas Bean, Barnett A. Rattner
2018, Book chapter, Health care and environmental contamination
A diverse range of fauna could be exposed to active pharmaceutical ingredients (APIs) via diet, dermal absorption or bioconcentration. Low level exposures of free-ranging wildlife to APIs has only been demonstrated for a few pathways (e.g., ingestion of fish in estuaries by piscivorous birds), and many remain hypothetical (e.g., ingestion...
Fire and grazing influence site resistance to Bromus tectorum through their effects on shrub, bunchgrass and biocrust communities in the Great Basin (USA)
Lea A. Condon, David A. Pyke
2018, Ecosystems (21) 1416-1431
Shrubs, bunchgrasses and biological soil crusts (biocrusts) are believed to contribute to site resistance to plant invasions in the presence of cattle grazing. Although fire is a concomitant disturbance with grazing, little is known regarding their combined impacts on invasion resistance. We are the first to date to test the...
High‐prevalence and low‐intensity Ichthyophonus infections in Pacific Halibut
Paul Hershberger, Jacob L. Gregg, Claude L. Dykstra
2018, Journal of Aquatic Animal Health (30) 13-19
Ichthyophonus occurred at high prevalence but low intensity in Pacific Halibut Hippoglossus stenolepis throughout the West Coast of North America, ranging from coastal Oregon to the Bering Sea. Infection prevalence in adults was variable on spatial and temporal scales, with the lowest prevalence typically occurring on the edges of the geographic range and...
Nest survival modelling using a multi-species approach in forests managed for timber and biofuel feedstock
Zachary G. Loman, Adrian P. Monroe, Samuel K. Riffell, Darren A. Miller, Francisco Vilella, Bradley R. Wheat, Scott A. Rush, James A. Martin
2018, Journal of Applied Ecology (55) 937-946
Switchgrass (Panicum virgatum) intercropping is a novel forest management practice for biomass production intended to generate cellulosic feedstocks within intensively managed loblolly pine‐dominated landscapes. These pine plantations are important for early‐successional bird species, as short rotation times continually maintain early‐successional habitat. We tested the efficacy of using community models...
Potential effects of elevated base flow and midsummer spike flow experiments on riparian vegetation along the Green River
Jonathan M. Friedman
2018, Natural Resource Report NPS/NRSS/WRD/NRR—2018/1603
The Upper Colorado River Endangered Fish Recovery Program has requested experimental flow releases from Flaming Gorge Dam for (1) elevated summer base flows to promote larval endangered Colorado pikeminnow, and (2) midsummer spike flows to disadvantage spawning invasive smallmouth bass. This white paper explores the effects of these proposed flow...
Species distribution modeling in regions of high need and limited data: waterfowl of China
Diann J. Prosser, Changqing Ding, R. Michael Erwin, Taej Mundkur, Jeffery D. Sullivan, Erle C. Ellis
2018, Avian Research (9) 1-14
BackgroundA number of conservation and societal issues require understanding how species are distributed on the landscape, yet ecologists are often faced with a lack of data to develop models at the resolution and extent desired, resulting in inefficient use of conservation resources. Such a situation...