Using high-throughput DNA sequencing, genetic fingerprinting, and quantitative PCR as tools for monitoring bloom-forming and toxigenic cyanobacteria in Upper Klamath Lake, Oregon, 2013 and 2014
Sara L. Caldwell Eldridge, Conner Driscoll, Theo W. Dreher
2017, Scientific Investigations Report 2017-5026
Monitoring the community structure and metabolic activities of cyanobacterial blooms in Upper Klamath Lake, Oregon, is critical to lake management because these blooms degrade water quality and produce toxic microcystins that are harmful to humans, domestic animals, and wildlife. Genetic tools, such as DNA fingerprinting by terminal restriction fragment...
Indicator-driven conservation planning across terrestrial, freshwater aquatic, and marine ecosystems of the south Atlantic, USA
Bradley A. Pickens, Rua S. Mordecai, C. Ashton Drew, Louise B. Alexander-Vaughn, Amy S. Keister, Hilary L.C. Morris, Jaime A. Collazo
2017, Journal of Fish and Wildlife Management (8) 219-233
Systematic conservation planning, a widely used approach to identify priority lands and waters, uses efficient, defensible, and transparent methods aimed at conserving biodiversity and ecological systems. Limited financial resources and competing land uses can be major impediments to conservation; therefore, participation of diverse stakeholders in the planning process is advantageous...
Amphibian terrestrial habitat selection and movement patterns vary with annual life-history period
Luke A. Groff, Aram J.K. Calhoun, Cynthia S. Loftin
2017, Canadian Journal of Zoology (95) 433-442
Identification of essential habitat is a fundamental component of amphibian conservation; however, species with complex life histories frequently move among habitats. To better understand dynamic habitat use, we evaluated Wood Frog (Lithobates sylvaticus (LeConte, 1825)) habitat selection and movement patterns during the spring migration and foraging periods and described the spatiotemporal...
USGS integrated drought science
Andrea C. Ostroff, Clint C. Muhlfeld, Patrick M. Lambert, Nathaniel L. Booth, Shawn L. Carter, Jason M. Stoker, Michael J. Focazio
2017, Circular 1430
Project Need and OverviewDrought poses a serious threat to the resilience of human communities and ecosystems in the United States (Easterling and others, 2000). Over the past several years, many regions have experienced extreme drought conditions, fueled by prolonged periods of reduced precipitation and exceptionally warm temperatures. Extreme drought has...
Snow and ice
Jeremy S. Littell, Stephanie A. McAfee, Shad O’Neel, Louis C. Sass, Evan Burgess, Steve Colt, Paul Clark
Gregory D. Hayward, Steve Colt, Monica L. McTeague, Teresa N. Hollingsworth, editor(s)
2017, General Technical Report PNW-GTR-950-3
Temperature and precipitation are key determinants of snowpack levels. Therefore, climate change is likely to affect the role of snow and ice in the landscapes and hydrology of the Chugach National Forest region.Downscaled climate projections developed by Scenarios Network for Alaska and Arctic Planning (SNAP) are useful for examining projected...
Nutrient feedbacks to soil heterotrophic nitrogen fixation in forests
Steven S. Perakis, Julie C. Pett-Ridge, Christina E. Catricala
2017, Biogeochemistry (134) 41-55
Multiple nutrient cycles regulate biological nitrogen (N) fixation in forests, yet long-term feedbacks between N-fixation and coupled element cycles remain largely unexplored. We examined soil nutrients and heterotrophic N-fixation across a gradient of 24 temperate conifer forests shaped by legacies of symbiotic N-fixing trees. We observed positive relationships among mineral...
Intraspecific variability and reaction norms of forest understory plant species traits
Julia I. Burton, Steven S. Perakis, Sean C. McKenzie, Caitlin E. Lawrence, Klaus J. Puettmann
2017, Functional Ecology (31) 1881-1893
Trait-based models of ecological communities typically assume intraspecific variation in functional traits is not important, though such variation can change species trait rankings along gradients in resources and environmental conditions, and thus influence community structure and function.We examined the degree of intraspecific relative to interspecific variation, and reaction norms of...
Mapping climate change refugia in the Sierra Nevada
Toni Lyn Morelli
2017, Newsletter
No abstract available....
Magnetic monitoring in Saguaro National Park
Jeffrey J. Love, Carol Finn, Yesenia C. Gamez Valdez, Don Swann
2017, Fact Sheet 2017-3035
On a sandy, arid plain, near the Rincon Mountain Visitor Center of Saguaro National Park, tucked in among brittlebush, creosote, and other hardy desert plants, is an unusual type of observatory—a small unmanned station that is used for monitoring the Earth’s variable magnetic field. Named for the nearby city of...
Evaluation of long-term trends in hydrologic and water-quality conditions, and estimation of water budgets through 2013, Chester County, Pennsylvania
Ronald A. Sloto, Andrew G. Reif
2017, Scientific Investigations Report 2017-5025
An evaluation of trends in hydrologic and water quality conditions and estimation of water budgets through 2013 was done by the U.S. Geological Survey in cooperation with the Chester County Water Resources Authority. Long-term hydrologic, meteorologic, and biologic data collected in Chester County, Pennsylvania, which included streamflow, groundwater levels, surface-water...
Methane and benzene in drinking-water wells overlying the Eagle Ford, Fayetteville, and Haynesville Shale hydrocarbon production areas
Peter B. McMahon, Jeannie R. B. Barlow, Mark A. Engle, Kenneth Belitz, Patricia B. Ging, Andrew G. Hunt, Bryant C. Jurgens, Yousif K. Kharaka, Roland W. Tollett, Timothy M. Kresse
2017, Environmental Science & Technology (51) 6727-6734
Water wells (n = 116) overlying the Eagle Ford, Fayetteville, and Haynesville Shale hydrocarbon production areas were sampled for chemical, isotopic, and groundwater-age tracers to investigate the occurrence and sources of selected hydrocarbons in groundwater. Methane isotopes and hydrocarbon gas compositions indicate most of the methane in the wells was...
Incorporating genetic sampling in long-term monitoring and adaptive management in the San Diego County Management Strategic Plan Area, Southern California
Amy G. Vandergast
2017, Open-File Report 2017-1061
Habitat and species conservation plans usually rely on monitoring to assess progress towards conservation goals. Southern California, USA, is a hotspot of biodiversity and home to many federally endangered and threatened species. Here, several regional multi-species conservation plans have been implemented to balance development and conservation goals, including in...
Monitoring the cooling of the 1959 Kīlauea Iki lava lake using surface magnetic measurements
Lydie Gailler, James P. Kauahikaua
2017, Bulletin of Volcanology (79) 1-7
Lava lakes can be considered as proxies for small magma chambers, offering a unique opportunity to investigate magma evolution and solidification. Repeated magnetic ground surveys over more than 50 years each show a large vertical magnetic intensity anomaly associated with Kīlauea Iki Crater, partly filled with a lava lake during the...
A shifting rift—Geophysical insights into the evolution of Rio Grande rift margins and the Embudo transfer zone near Taos, New Mexico
V. J. S. Grauch, Paul W. Bauer, Benjamin J. Drenth, Keith I. Kelson
2017, Geosphere (13) 870-910
We present a detailed example of how a subbasin develops adjacent to a transfer zone in the Rio Grande rift. The Embudo transfer zone in the Rio Grande rift is considered one of the classic examples and has been used as the inspiration for several theoretical models. Despite this...
Seasonal and spatial variabilities in northern Gulf of Alaska surface water iron concentrations driven by shelf sediment resuspension, glacial meltwater, a Yakutat eddy, and dust
John Crusius, Andrew W. Schroth, Joseph A. Resing, Jay Cullen, Robert W. Campbell
2017, Global Biogeochemical Cycles (31) 942-960
Phytoplankton growth in the Gulf of Alaska (GoA) is limited by iron (Fe), yet Fe sources are poorly constrained. We examine the temporal and spatial distributions of Fe, and its sources in the GoA, based on data from three cruises carried out in 2010 from the Copper River (AK) mouth...
Thermal and petrologic constraints on lower crustal melt accumulation under the Salton Sea Geothermal Field
Ozge Karakas, Josef Dufek, Margaret T. Mangan, Heather M. Wright, Olivier Bachmann
2017, Earth and Planetary Science Letters (467) 10-17
In the Salton Sea region of southern California (USA), concurrent magmatism, extension, subsidence, and sedimentation over the past 0.5 to 1.0 Ma have led to the creation of the Salton Sea Geothermal Field (SSGF)—the second largest and hottest geothermal system in the continental United States—and the small-volume rhyolite eruptions that...
Uncertainties in forecasting the response of polar bears to global climate change
David C. Douglas, Todd C. Atwood
Andy Butterworth, editor(s)
2017, Book chapter, Marine animal welfare
Several sources of uncertainty affect how precisely the future status of polar bears (Ursus maritimus) can be forecasted. Foremost are unknowns about the future levels of global greenhouse gas emissions, which could range from an unabated increase to an aggressively mitigated reduction. Uncertainties also arise because different climate...
Biogenic non-crystalline U(IV) revealed as major component in uranium ore deposits
Amrita Bhattacharyya, Kate M. Campbell, Shelly Kelly, Yvonne Roebbert, Stefan Weyer, Rizlan Bernier-Latmani, Thomas Borch
2017, Nature Communications (8)
Historically, it is believed that crystalline uraninite, produced via the abiotic reduction of hexavalent uranium (U(VI)) is the dominant reduced U species formed in low-temperature uranium roll-front ore deposits. Here we show that non-crystalline U(IV) generated through biologically mediated U(VI) reduction is the predominant U(IV) species in an undisturbed U roll-front ore deposit...
Mangrove species' responses to winter air temperature extremes in China
Luzhen Chen, Wenqing Wang, Qingshun Q. Li, Yihui Zhang, Shengchang Yang, Michael J. Osland, Jinliang Huang, Congjiao Peng
2017, Ecosphere (8)
The global distribution and diversity of mangrove forests is greatly influenced by the frequency and intensity of winter air temperature extremes. However, our understanding of how different mangrove species respond to winter temperature extremes has been lacking because extreme freezing and chilling events are, by definition, relatively uncommon and also...
Complex mixtures of Pesticides in Midwest U.S. streams indicated by POCIS time-integrating samplers
Peter C. Van Metre, David Alvarez, Barbara Mahler, Lisa H. Nowell, Mark W. Sandstrom, Patrick W. Moran
2017, Environmental Pollution (220) 431-440
The Midwest United States is an intensely agricultural region where pesticides in streams pose risks to aquatic biota, but temporal variability in pesticide concentrations makes characterization of their exposure to organisms challenging. To compensate for the effects of temporal variability, we deployed polar organic chemical integrative samplers (POCIS) in 100...
Benchmarking computational fluid dynamics models of lava flow simulation for hazard assessment, forecasting, and risk management
Hannah R. Dietterich, Einat Lev, Jiangzhi Chen, Jacob A. Richardson, Katharine V. Cashman
2017, Journal of Applied Volcanology (6)
Numerical simulations of lava flow emplacement are valuable for assessing lava flow hazards, forecasting active flows, designing flow mitigation measures, interpreting past eruptions, and understanding the controls on lava flow behavior. Existing lava flow models vary in simplifying assumptions, physics, dimensionality, and the degree to which they have been validated...
Western bats as a reservoir of novel Streptomyces species with antifungal activity
Paris S. Hamm, Nicole A. Caimi, Diana E. Northup, Ernest W. Valdez, Debbie C. Buecher, Christopher A. Dunlap, David P. Labeda, Shiloh Lueschow, Andrea Porras-Alfaro
2017, Applied and Environmental Microbiology (83) 1-10
At least two-thirds of commercial antibiotics today are derived from Actinobacteria, more specifically from the genus Streptomyces. Antibiotic resistance and new emerging diseases pose great challenges in the field of microbiology. Cave systems, in which actinobacteria are ubiquitous and abundant, represent new opportunities for...
Assessing changes in the physico-chemical properties and fluoride adsorption capacity of activated alumina under varied conditions
Laura Craig, Lisa L. Stillings, David L. Decker
2017, Applied Geochemistry (76) 112-123
Adsorption using activated alumina is a simple method for removing fluoride from drinking water, but to be cost effective the adsorption capacity must be high and effective long-term. The intent of this study was to assess changes in its adsorption capacity under varied conditions. This...
Historical patterns of acidification and increasing CO2 flux associated with Florida springs
Kira E. Barrera, Lisa L. Robbins
2017, Limnology and Oceanography (62) 2404-2417
Florida has one of the highest concentrations of springs in the world, with many discharging into rivers and predominantly into eastern Gulf of Mexico coast, and they likely influence the hydrochemistry of these adjacent waters; however, temporal and spatial trends have not been well studied. We present over 20 yr...
Aerodynamic roughness length estimation with lidar and imaging spectroscopy in a shrub-dominated dryland
Aihua Li, Wenguang Zhao, Jessica J Mitchell, Nancy F. Glenn, Matthew J. Germino, Joel B. Sankey, Richard M. Allen
2017, Photogrammetric Engineering and Remote Sensing (83) 415-427
The aerodynamic roughness length (Z0 m) serves an important role in the flux exchange between the land surface and atmosphere. In this study, airborne lidar (ALS), terrestrial lidar (TLS), and imaging spectroscopy data were integrated to develop and test two approaches to estimate Z0 m over a shrub dominated dryland study area in...
