Prior knowledge-based approach for associating contaminants with biological effects: A case study in the St. Croix River basin, MN, WI, USA
Anthony L. Schroeder, Dalma Martinovic-Weigelt, Gerald T. Ankley, Kathy Lee, Natalia Garcia-Reyero, Edward J. Perkins, Heiko L. Schoenfuss, Daniel L. Villeneuve
2017, Environmental Pollution (221) 427-436
Evaluating potential adverse effects of complex chemical mixtures in the environment is challenging. One way to address that challenge is through more integrated analysis of chemical monitoring and biological effects data. In the present study, water samples from five locations near two municipal wastewater treatment plants in the St. Croix...
Multi-year microbial source tracking study characterizing fecal contamination in an urban watershed
Rebecca N. Bushon, Amie M.G. Brady, Eric D. Christensen, Erin A. Stelzer
2017, Water Environment Research (89) 127-143
Microbiological and hydrological data were used to rank tributary stream contributions of bacteria to the Little Blue River in Independence, Missouri. Concentrations, loadings and yields of E. coli and microbial source tracking (MST) markers, were characterized during base flow and storm events in five subbasins within Independence, as well as...
Hard choices in assessing survival past dams — a comparison of single- and paired-release strategies
Joseph D. Zydlewski, Daniel S. Stich, Douglas B. Sigourney
2017, Canadian Journal of Fisheries and Aquatic Sciences (74) 178-190
Mark–recapture models are widely used to estimate survival of salmon smolts migrating past dams. Paired releases have been used to improve estimate accuracy by removing components of mortality not attributable to the dam. This method is accompanied by reduced precision because (i) sample size is reduced relative to a single,...
A discrete stage-structured model of California newt population dynamics during a period of drought
Marjorie T. Jones, William R. Milligan, Lee B. Kats, Thomas L. Vandergon, Rodney L. Honeycutt, Robert N. Fisher, Courtney L. Davis, Timothy A. Lucas
2017, Journal of Theoretical Biology (414) 245-253
We introduce a mathematical model for studying the population dynamics under drought of the California newt (Taricha torosa), a species of special concern in the state of California. Since 2012, California has experienced a record-setting drought, and multiple studies predict drought conditions currently underway will persist and even increase in...
Suppression of invasive lake trout in an isolated backcountry lake in Glacier National Park
C. R. Fredenberg, Clint C. Muhlfeld, Christopher S. Guy, Vincent S. D'Angelo, Christopher C. Downs, John M. Syslo
2017, Fisheries Management and Ecology (24) 33-48
Fisheries managers have implemented suppression programmes to control non-native lake trout, Salvelinus namaycush (Walbaum), in several lakes throughout the western United States. This study determined the feasibility of experimentally suppressing lake trout using gillnets in an isolated backcountry lake in Glacier National Park, Montana, USA, for the conservation of threatened...
Using silver and bighead carp cell lines for the identification of a unique metabolite fingerprint from thiram-specific chemical exposure
Joel G. Putnam, Justine Nelson, Eric M. Leis, Richard A. Erickson, Terrance D. Hubert, Jon J. Amberg
2017, Chemosphere (168) 1477-1485
Conservation biology often requires the control of invasive species. One method is the development and use of biocides. Identifying new chemicals as part of the biocide registration approval process can require screening millions of compounds. Traditionally, screening new chemicals has been done in vivo using test organisms. Using in vitro (e.g.,...
Simulation of earthquake ground motions in the eastern United States using deterministic physics‐based and site‐based stochastic approaches
Sanaz Rezaeian, Stephen H. Hartzell, Xiaodan Sun, Carlos Mendoza
2017, Bulletin of the Seismological Society of America (107) 149-168
Earthquake ground‐motion recordings are scarce in the central and eastern United States (CEUS) for large‐magnitude events and at close distances. We use two different simulation approaches, a deterministic physics‐based method and a site‐based stochastic method, to simulate ground motions over a wide range of magnitudes. Drawing...
Using diurnal temperature signals to infer vertical groundwater-surface water exchange
Dylan J. Irvine, Martin A. Briggs, Laura K. Lautz, Ryan P. Gordon, Jeffrey M. McKenzie, Ian Cartwright
2017, Groundwater (55) 10-26
Heat is a powerful tracer to quantify fluid exchange between surface water and groundwater. Temperature time series can be used to estimate pore water fluid flux, and techniques can be employed to extend these estimates to produce detailed plan-view flux maps. Key advantages of heat tracing include cost-effective sensors and...
The Chief Joseph Hatchery Program 2014 Annual Report
Andrea Pearl, Matthew Laramie, Casey Baldwin, John Rohrback, Pat Phillips
2017, Report
The Chief Joseph Hatchery Program is comprised of both operations and maintenance of the Chief Joseph Hatchery, located near Bridgeport, Washington and the monitoring and evaluation of natural- and hatchery-origin Chinook salmon in the Okanogan Subbasin. In 2014, the Chief Joseph Hatchery released 44,267 yearling and 186,050 subyearling integrated Chinook...
Inhibition of an aquatic rhabdovirus demonstrates promise of a broad-spectrum antiviral for use in aquaculture
Bethany F. Balmer, Rachel L. Powers, Ting-Hu Zhang, Jihye Lee, Frederic Vigant, Benhur Lee, Michael E. Jung, Maureen K. Purcell, Kevin Snekvik, Hector C. Aguilar
2017, Journal of Virology (91)
Many enveloped viruses cause devastating disease in aquaculture, resulting in significant economic impact. LJ001 is a broad-spectrum antiviral compound that inhibits enveloped virus infections by specifically targeting phospholipids in the lipid bilayer via the production of singlet oxygen (1O2). This stabilizes positive curvature and decreases membrane fluidity, which inhibits virus-cell...
Confirmation of the southwest continuation of the Cat Square terrane, southern Appalachian Inner Piedmont, with implications for middle Paleozoic collisional orogenesis
Matthew T. Huebner, Robert D. Hatcher Jr., Arthur J. Merschat
2017, American Journal of Science (317) 95-176
Detailed geologic mapping, U-Pb zircon geochronology and whole-rock geochemical analyses were conducted to test the hypothesis that the southwestern extent of the Cat Square terrane continues from the northern Inner Piedmont (western Carolinas) into central Georgia. Geologic mapping revealed the Jackson Lake fault, a ∼15 m-thick, steeply dipping sillimanite-grade...
Relations between some horizontal‐component ground‐motion intensity measures used in practice
David Boore, Tadahiro Kishida
2017, Bulletin of the Seismological Society of America (107) 334-343
Various measures using the two horizontal components of recorded ground motions have been used in a number of studies that derive ground‐motion prediction equations and construct maps of shaking intensity. We update relations between a number of these measures, including those in Boore et al. (2006) and Boore (2010), using the large...
Dynamic strains for earthquake source characterization
Andrew J. Barbour, Brendan W. Crowell
2017, Seismological Research Letters (88) 354-370
Strainmeters measure elastodynamic deformation associated with earthquakes over a broad frequency band, with detection characteristics that complement traditional instrumentation, but they are commonly used to study slow transient deformation along active faults and at subduction zones, for example. Here, we analyze dynamic strains at Plate Boundary Observatory (PBO) borehole strainmeters...
Donor life stage influences juvenile American eel Anguilla rostrata attraction to conspecific chemical cues
Heather S. Galbraith, Carrie J. Blakeslee, Andrew K. Schmucker, Nicholas S. Johnson, Michael J. Hansen, Weiming Li
2017, Journal of Fish Biology (90) 384-395
The present study investigated the potential role of conspecific chemical cues in inland juvenile American eel Anguilla rostrata migrations by assessing glass eel and 1 year old elver affinities to elver washings, and elver affinity to adult yellow eel washings. In two-choice maze assays, glass eels were attracted to elver washings,...
Nationwide reconnaissance of contaminants of emerging concern in source and treated drinking waters of the United States: Pharmaceuticals
Edward T. Furlong, Angela L. Batt, Susan T. Glassmeyer, Mary C. Noriega, Dana W. Kolpin, Heath Mash, Kathleen M. Schenck
2017, Science of the Total Environment (579) 1629-1642
Mobile and persistent chemicals that are present in urban wastewater, such as pharmaceuticals, may survive on-site ormunicipal wastewater treatment and post-discharge environmental processes. These pharmaceuticals have the potential to reach surface and groundwaters, essential drinking-water sources. A joint, two-phase U.S. Geological Survey-U.S. Environmental Protection Agency study examined source and treated waters from 25 drinking-water...
The invasive ant, Solenopsis invicta, reduces herpetofauna richness and abundance
Craig R. Allen, Hannah E. Birge, J. Slater, E. Wiggers
2017, Biological Invasions (19) 713-722
Amphibians and reptiles are declining globally. One potential cause of this decline includes impacts resulting from co-occurrence with non-native red imported fire ant, Solenopsis invicta. Although a growing body of anecdotal and observational evidence from laboratory experiments supports this hypothesis, there remains a lack of field scale manipulations testing...
Collar temperature sensor data reveal long-term patterns in southern Beaufort Sea polar bear den distribution on pack ice and land
Jay W Olson, Karyn D. Rode, Dennis L. Eggett, T. S. Smith, R. R. Wilson, George M. Durner, Anthony S. Fischbach, Todd C. Atwood, David C. Douglas
2017, Marine Ecology Progress Series (564) 211-224
In response to a changing climate, many species alter habitat use. Polar bears Ursus maritimus in the southern Beaufort Sea have increasingly used land for maternal denning. To aid in detecting denning behavior, we developed an objective method to identify polar bear denning events using temperature sensor data collected by satellite-linked transmitters...
Evolutionary and functional mitogenomics associated with the genetic restoration of the Florida panther
Alexander Ochoa, David P. Onorato, Robert R. Fitak, Melody Roelke-Parker, Melanie Culver
2017, Journal of Heredity (108) 449-455
Florida panthers are endangered pumas that currently persist in reduced patches of habitat in South Florida, USA. We performed mitogenome reference-based assemblies for most parental lines of the admixed Florida panthers that resulted from the introduction of female Texas pumas into South Florida in 1995. With the addition of 2...
Nonbreeding isolation and population-specific migration patterns among three populations of Golden-winged Warblers
Gunnar R. Kramer, Henry M. Streby, Sean M. Peterson, Justin A. Lehman, David A. Buehler, Petra B. Wood, Darin J. McNeil Jr., Jeffrey L. Larkin, David E. Andersen
2017, Condor (119) 108-121
Golden-winged Warblers (Vermivora chrysoptera) are Nearctic–Neotropical migrants experiencing varied regional population trends not fully explained by breeding-grounds factors such as nest success. A lack of detailed information on the nonbreeding distributions, migration routes, or timing of migration among populations hampers our ability to identify population processes outside the breeding period....
Ca isotopic geochemistry of an Antarctic aquatic system
W. Berry Lyons, Thomas D. Bullen, Kathleen A. Welch
2017, Geophysical Research Letters (44) 882-891
The McMurdo Dry Valleys, Antarctica, are a polar desert ecosystem. The hydrologic system of the dry valleys is linked to climate with ephemeral streams that flow from glacial melt during the austral summer. Past climate variations have strongly influenced the closed-basin, chemically stratified lakes on the valley floor. Results of...
Tidal triggering of earthquakes suggests poroelastic behavior on the San Andreas Fault
Andrew Delorey, Nicholas van der Elst, Paul Johnson
2017, Earth and Planetary Science Letters (460) 164-170
Tidal triggering of earthquakes is hypothesized to provide quantitative information regarding the fault's stress state, poroelastic properties, and may be significant for our understanding of seismic hazard. To date, studies of regional or global earthquake catalogs have had only modest successes in identifying tidal triggering. We posit that the smallest...
Temporal expansion of annual crop classification layers for the CONUS using the C5 decision tree classifier
Aaron M. Friesz, Bruce K. Wylie, Daniel M. Howard
2017, Remote Sensing Letters (8) 389-398
Crop cover maps have become widely used in a range of research applications. Multiple crop cover maps have been developed to suite particular research interests. The National Agricultural Statistics Service (NASS) Cropland Data Layers (CDL) are a series of commonly used crop cover maps for the conterminous United States (CONUS)...
Fish and invertebrate flow-biology relationships to support the determination of ecological flows for North Carolina
Jennifer Phelan, Thomas F. Cuffney, Lauren A. Patterson, Michele Eddy, Robert Dykes, Sam Pearsall, Chris Goudreau, Jim Mead, Fred Tarver
2017, Journal of the American Water Resources Association (53) 42-55
A method was developed to characterize fish and invertebrate responses to flow alteration in the state of North Carolina. This method involved using 80th percentile linear quantile regressions to relate six flow metrics to the diversity of riffle-run fish and benthic Ephemeroptera, Plecoptera, and Trichoptera (EPT) richness. All twelve flow-biology...
Integration of genetic and demographic data to assess population risk in a continuously distributed species
Bradley C. Fedy, Jeffery R. Row, Sara J. Oyler-McCance
2017, Conservation Genetics (18) 89-104
The identification and demographic assessment of biologically meaningful populations is fundamental to species’ ecology and management. Although genetic tools are used frequently to identify populations, studies often do not incorporate demographic data to understand their respective population trends. We used genetic data to define subpopulations in a continuously distributed...
An integrated data model to estimate spatiotemporal occupancy, abundance, and colonization dynamics
Perry J. Williams, Mevin Hooten, Jamie N. Womble, George G. Esslinger, Michael R. Bower, Trevor J. Hefley
2017, Ecology (98) 328-336
Ecological invasions and colonizations occur dynamically through space and time. Estimating the distribution and abundance of colonizing species is critical for efficient management or conservation. We describe a statistical framework for simultaneously estimating spatiotemporal occupancy and abundance dynamics of a colonizing species. Our method accounts for several issues that are...