Predictive habitat models derived from nest-box occupancy for the endangered Carolina northern flying squirrel in the southern Appalachians
W. Mark Ford, A.M. Evans, Richard H. Odom, Jane L. Rodrigue, C.A. Kelly, Nicole Abaid, Corinne A. Diggins, Doug Newcomb
2016, Endangered Species Research (27) 131-140
In the southern Appalachians, artificial nest-boxes are used to survey for the endangered Carolina northern flying squirrel (CNFS; Glaucomys sabrinus coloratus), a disjunct subspecies associated with high elevation (>1385 m) forests. Using environmental parameters diagnostic of squirrel habitat, we created 35 a priori occupancy models in the program PRESENCE for boxes surveyed in...
Conservation of imperiled crayfish species - Cambarus veteranus (Decapoda: Cambaridae)
Stuart A. Welsh, Zachary J. Loughman, Roger F. Thoma, James W. Fetzner
2016, Journal of Crustacean Biology (35) 850-860
Comparative mitogenomic analyses of three North American stygobiont amphipods of the genus Stygobromus (Crustacea: Amphipoda)
Aaron W. Aunins, David L. Nelms, Christopher S. Hobson, Tim L. King
2016, Mitochondrial DNA Part B (1) 560-563
The mitochondrial genomes of three North American stygobiont amphipods Stygobromus tenuis potomacus, S. foliatus and S. indentatus collected from Caroline County, VA, were sequenced using a shotgun sequencing approach on an Illumina NextSeq500 (Illumina Inc., San Diego, CA). All three mitogenomes displayed 13 protein-coding genes, 22 tRNAs and two rRNAs typical of metazoans. While S. tenuis and S....
Drivers of Caribbean freshwater ecosystems and fisheries
Thomas J. Kwak, Augustin C. Engman, Jesse R. Fischer, Craig G. Lilyestrom
2016, Book chapter, Freshwater, fish and the future: Proceedings of the Global Cross-Sectoral Conference
No abstract available....
An evaluation of behavior inferences from Bayesian state-space models: A case study with the Pacific walrus
William S. Beatty, Chadwick V. Jay, Anthony S. Fischbach
2016, Marine Mammal Science (32) 1299-1318
State-space models offer researchers an objective approach to modeling complex animal location data sets, and state-space model behavior classifications are often assumed to have a link to animal behavior. In this study, we evaluated the behavioral classification accuracy of a Bayesian state-space model in Pacific walruses using Argos satellite tags...
Animated tectonic reconstruction of the Lower Colorado River region: Implications for Late Miocene to Present deformation
Scott E.K. Bennett, Michael H. Darin, Rebecca J. Dorsey, Lisa A. Skinner, Paul J. Umhoefer, Michael E. Oskin
2016, Conference Paper, Going LOCO Investigations along the Lower Colorado River - 2016 Desert Symposium Field Guide and Proceedings
Although the majority of late Miocene to present Pacific-North America plate boundary strain has been accommodated by faults of the San Andreas and Gulf of California systems, growing evidence of dextral shear east of the San Andreas Fault indicates that a component of plate boundary deformation occurred in the lower...
Influence of Didymosphenia geminata blooms on prey composition and associated diet and growth of Brown Trout
Daniel A. James, Steven R. Chipps
2016, Transactions of the American Fisheries Society (145) 195-205
We compared diet, stomach fullness, condition, and growth of Brown Trout Salmo trutta among streams with or without blooms of the benthic diatom Didymosphenia geminata in the Black Hills, South Dakota. In Rapid Creek, where D. geminata blooms covered ∼30% of the stream bottom, Brown Trout consumed fewer ephemeropterans (6–8%...
An overview of environmental impacts and reclamation efforts at the Iron Mountain mine, Shasta County, California
James A Jacobs, Stephen M. Testa, Charles N. Alpers, D. Kirk Nordstrom
2016, Book chapter, Applied geology in California
No abstract available ...
Establishing a baseline of estuarine submerged aquatic vegetation resources across salinity zones within coastal areas of the northern Gulf of Mexico
Eva R. Hillmann, Kristin DeMarco, Megan K. LaPeyre
2016, Journal of the Southeastern Association of Fish and Wildlife Agencies (3) 25-32
Coastal ecosystems are dynamic and productive areas that are vulnerable to effects of global climate change. Despite their potentially limited spatial extent, submerged aquatic vegetation (SAV) beds function in coastal ecosystems as foundation species, and perform important ecological services. However, limited understanding of the factors controlling SAV distribution and abundance...
Ore mineralogy and textural zonation in the world-class epithermal Waihi Vein System, Hauraki Goldfield
Jeffrey L. Mauk, Erin G Skinner, Sarah J Fyfe, Andrew H Menzies, Heather A. Lowers, Alan E. Koenig
2016, Book chapter, AusIMM Monograph 31: Mineral deposits of New Zealand—Exploration and research
The Waihi district in the Hauraki Goldfield of New Zealand contains adularia-sericite epithermal gold-silver veins that have produced more than 7.7 Moz gold. The outermost veins of the district (Martha, Favona, Moonlight, and Cowshed) contain abundant colloform, cherty, and black quartz fill textures, with minor crustiform and massive quartz. The...
Small mammal communities in eastern redcedar forest
Christopher J. Reddin, David G. Krementz
2016, American Midland Naturalist (175) 113-119
Eastern redcedar (Juniperus virginiana) is a fire-intolerant tree species that has encroached into grassland ecosystems throughout central and eastern North America. Many land managers are interested in removing eastern redcedar to restore native grasslands. We surveyed small mammals using mark-recapture methods in eastern redcedar forest, warm-season grassland, and oldfield habitats...
Upper bound of abutment scour in laboratory and field data
Stephen Benedict
2016, Transportation Research Record (2588) 154-162
The U.S. Geological Survey, in cooperation with the South Carolina Department of Transportation, conducted a field investigation of abutment scour in South Carolina and used those data to develop envelope curves that define the upper bound of abutment scour. To expand on this previous work, an additional cooperative investigation was...
Physiological basis of climate change impacts on North American inland fishes
James E. Whitney, Robert K. Al-Chokhachy, David B. Bunnell, Colleen A. Caldwell, Steven J. Cooke, Erika J. Eliason, Mark W. Rogers, Abigail J. Lynch, Craig P. Paukert
2016, Fisheries (41) 332-345
Global climate change is altering freshwater ecosystems and affecting fish populations and communities. Underpinning changes in fish distribution and assemblage-level responses to climate change are individual-level physiological constraints. In this review, we synthesize the mechanistic effects of climate change on neuroendocrine, cardiorespiratory, immune, osmoregulatory, and reproductive systems of freshwater and...
Dissolved oxygen: Chapter 6
David Senn, Maureen A. Downing-Kunz, Emily Novick
2016, Report, Lower South Bay nutrient synthesis
Dissolved oxygen (DO) concentration serves as an important indicator of estuarine habitat condition, because all aquatic macro-organisms require some minimum DO level to survive and prosper. The instantaneous DO concentration, measured at a specific location in the water column, results from a balance between multiple processes that add or remove...
Watershed-scale changes in terrestrial nitrogen cycling during a period of decreased atmospheric nitrate and sulfur deposition
Robert D. Sabo, Sara E. Scanga, Gregory B. Lawrence, David M. Nelson, Keith N. Eshleman, Gabriel A. Zabala, Alexandria A. Alinea, Charles D. Schirmer
2016, Atmospheric Environment (146) 271-279
Recent reports suggest that decreases in atmospheric nitrogen (N) deposition throughout Europe and North America may have resulted in declining nitrate export in surface waters in recent decades, yet it is unknown if and how terrestrial N cycling was affected. During a period of decreased atmospheric N deposition, we assessed...
Potentially induced earthquakes during the early twentieth century in the Los Angeles Basin
Susan E. Hough, Morgan T. Page
2016, Bulletin of the Seismological Society of America (106) 2419-2435
Recent studies have presented evidence that early to mid‐twentieth‐century earthquakes in Oklahoma and Texas were likely induced by fossil fuel production and/or injection of wastewater (Hough and Page, 2015; Frohlich et al., 2016). Considering seismicity from 1935 onward, Hauksson et al. (2015) concluded that there is no evidence for significant induced activity...
Managed island ecosystems
Kathryn McEachern, Tanya Atwater, Paul W. Collins, Kate R. Faulkner, Daniel V. Richards
2016, Book chapter, Ecosystems of California
This long-anticipated reference and sourcebook for California’s remarkable ecological abundance provides an integrated assessment of each major ecosystem type—its distribution, structure, function, and management. A comprehensive synthesis of our knowledge about this biologically diverse state, Ecosystems of California covers the state from oceans to mountaintops using multiple lenses: past and...
Status of pelagic prey fishes in Lake Michigan, 2015
David M. Warner, Randall M. Claramunt, Steven A. Farha, Dale Hanson, Timothy J. Desorcie, Timothy P. O’Brien
2016, Report, Compiled reports to the Great Lake Fishery Commission of the annual bottom trawl and acoustics surveys, 2015
Acoustic surveys were conducted in late summer/early fall during the years 1992-1996 and 2001-2015 to estimate pelagic prey fish biomass in Lake Michigan. Midwater trawling during the surveys as well as target strength provided a measure of species and size composition of the fish community for use in scaling acoustic...
Assessing the potential for rainbow trout reproduction in tributaries of the Mountain Fork River below Broken Bow Dam, southeastern Oklahoma
James M. Long, Trevor A. Starks, Tyler Farling, Robert Bastarache
2016, e-Research Paper SRS–58
Stocked trout (Salmonidae) in reservoir tailwater systems in the Southern United States have been shown to use tributary streams for spawning and rearing. The lower Mountain Fork of the Little River below Broken Bow Dam is one of two year-round tailwater trout fisheries in Oklahoma, and the only one with...
Status and trends in the Lake Superior fish community, 2015
Mark R. Vinson, Lori M. Evrard, Owen T. Gorman, Daniel L. Yule
2016, Report, Compiled reports to the Great Lakes Fishery Commission of the annual bottom trawl and acoustics surveys, 2015
In 2015, the Lake Superior fish community was sampled with daytime bottom trawls at 76 nearshore and 33 offshore stations. Spring and summer water temperatures in 2015 were colder than average, but warmer than that observed in 2014. In the nearshore zone, a total of 11,882 individuals from 22 species...
Influence of basin- and local-scale environmental conditions on nearshore production in the northeast Pacific Ocean
Vanessa R. von Biela, Christian E. Zimmerman, Gordon H. Kruse, Franz J. Mueter, Bryan A. Black, David C. Douglas, James L. Bodkin
2016, Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science (8) 502-521
Nearshore marine habitats are productive and vulnerable owing to their connections to pelagic and terrestrial landscapes. To understand how ocean basin- and local-scale conditions may influence nearshore species, we developed an annual index of nearshore production (spanning the period 1972–2010) from growth increments recorded in otoliths of representative pelagic-feeding (Black...
Fishes of the Mississippi River
Harold Schramm, Jay T. Hatch, Robert A. Hrabik, William T. Slack
2016, Book chapter, Fishery resources, environment, and conservation in the Mississippi and Yangtze (Changjiang) River Basins
No abstract available....
Assessing the feasibility of using acoustic monitoring for Burbot conservation, management, and production
Timothy B. Grabowski
2016, Cooperator Science Series FWS/CSS-118-2016
Burbot Lota lota is the sole freshwater representative of the cod-like fishes and supports subsistence, commercial, and recreational fisheries worldwide above approximately 40° N. It is a difficult species to manage effectively due to its preference for deep-water habitats and spawning activity under the ice in winter. Like other gadiform...
Geology and geomorphology of the Carolina Sandhills, Chesterfield County, South Carolina
Christopher S. Swezey, Bradley A. Fitzwater, G. Richard Whittecar
2016, Book
This two-day field trip focuses on the geology and geomorphology of the Carolina Sandhills in Chesterfield County, South Carolina. This area is located in the updip portion of the U.S. Atlantic Coastal Plain province, supports an ecosystem of longleaf pine (Pinus palustris) and wiregrass (Aristida stricta), and contains three major...
Hydropedology: Synergistic integration of soil science and hydrology in the Critical Zone
H.S. Lin, J.J. McDonnell, John R. Nimmo, Y. A. Pachepsky
2016, Hydrological Processes (29) 4559-4561
Soil and water are the two critical components of theEarth’s Critical Zone (Figure 1): Soil modulates the connection between bedrock and the atmospheric boundary layer and water is a major driving force and transport agent between these two zones....