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A data-input program (MFI2005) for the U.S. Geological Survey modular groundwater model (MODFLOW-2005) and parameter estimation program (UCODE_2005)
Arien W. Harbaugh
2011, Open-File Report 2010-1057
The MFI2005 data-input (entry) program was developed for use with the U.S. Geological Survey modular three-dimensional finite-difference groundwater model, MODFLOW-2005. MFI2005 runs on personal computers and is designed to be easy to use; data are entered interactively through a series of display screens. MFI2005 supports parameter estimation using the UCODE_2005...
Species accounts for the Alamosa/Monte Vista/Baca National Wildlife Refuge Complex
Laura E. Ellison
2011, Open-File Report 2011-1285
As part of an interagency agreement between the U.S. Geological Survey (USGS) and the U.S. Fish and Wildlife Service (USFWS), the Alamosa/Monte Vista/Baca National Wildlife Refuge Complex requested help with the synthesis of scientific information for 10 focal species and their habitat requirements in response to common Refuge management activities...
National Climate Change and Wildlife Science Center project accomplishments: highlights
Sally Holl
2011, Fact Sheet 2011-3135
The National Climate Change and Wildlife Science Center (NCCWSC) has invested more than $20M since 2008 to put cutting-edge climate science research in the hands of resource managers across the Nation. With NCCWSC support, more than 25 cooperative research initiatives led by U.S. Geological Survey (USGS) researchers and technical staff...
Popular myths about flooding in Western Washington
Joseph L. Jones
2011, Fact Sheet 2011-3146
Floods are the most destructive natural hazard in the Nation, causing more deaths and financial loss in the 20th century than any other natural disaster. The most significant 20 riverine floods of the 20th century for which data are available have killed more than 1,843 people and caused more than...
Migration patterns, use of stopover areas, and austral summer movements of Swainson's hawks
Michael N. Kochert, Mark R. Fuller, Linda S. Schueck, Laura Bond, Marc J. Bechard, Brian Woodbridge, Geoff L. Holroyd, Mark S. Martell, Ursula Banasch
2011, The Condor (113) 89-106
From 1995 to 1998, we tracked movements of adult Swainson's Hawks (Buteo swainsoni), using satellite telemetry to characterize migration, important stopover areas, and movements in the austral summer. We tagged 46 hawks from July to September on their nesting grounds in seven U.S. states and two Canadian provinces. Swainson's Hawks...
Seepage investigations of the Clackamas River, Oregon
Karl K. Lee
2011, Scientific Investigations Report 2011-5191
Analysis of streamflow measurements and continuous records of streamflow provided insight into interaction of the groundwater system with the Clackamas River in northwestern Oregon. This report assesses gains and losses of the Clackamas River based on streamflow measurements made during previous hydrologic studies, decades of continuous streamflow data, and a...
Migratory movements of waterfowl in Central Asia and avian influenza emergence: Sporadic transmission of H5N1 from east to west
Samuel A. Iverson, Andrei Gavrilov, Todd E. Katzner, John Y. Takekawa, Tricia A. Miller, Ward Hagemeijer, Taej Mundkur, Balachandran Sivananinthaperumal, Carlos C. DeMattos, Lu’ay S. Ahmed, Scott H. Newman
2011, Ibis (153) 279-292
Waterfowl in the genera Anas and Tadorna are suspected as vectors in the long‐distance transmission of highly pathogenic avian influenza H5N1. The former Soviet Republics of Central Asia are situated at an important migratory crossroads for these and other species of birds that bridges regions where the disease is prevalent. However, waterfowl movements through...
Mineralogy and composition of the oceanic mantle
Keith Putirka, F. J. Ryerson, Michael Perfit, W. Ian Ridley
2011, Journal of Petrology (52) 279-313
The mineralogy of the oceanic basalt source region is examined by testing whether a peridotite mineralogy can yield observed whole-rock and olivine compositions from (1) the Hawaiian Islands, our type example of a mantle plume, and (2) the Siqueiros Transform, which provides primitive samples of normal mid-ocean ridge basalt. New...
Occurrence of antibiotic resistance and characterization of resistant genes and integrons in Enterobacteriaceae isolated from integrated fish farms south China
Hao-Chang Su, Guang-Guo Ying, Ran Tao, Rui-Quan Zhang, Lisa R. Fogarty, Dana W. Kolpin
2011, Journal of Environmental Monitoring (13) 3229-3236
Antibiotics are still widely applied in animal husbandry to prevent diseases and used as feed additives to promote animal growth. This could result in antibiotic resistance to bacteria and antibiotic residues in animals. In this paper, Enterobacteriaceae isolated from four integrated fish farms in Zhongshan, South China were tested for antibiotic resistance, tetracycline resistance genes, sulfonamide resistance genes, and class...
Information relevant to the U.S. Geological Survey assessment of the Middle Devonian Shale of the Appalachian Basin Province, 2011
USGS Marcellus Shale Assessment Team
2011, Open-File Report 2011-1298
The U.S. Geological Survey recently assessed the potential for natural gas resources in the Middle Devonian Marcellus Shale of the Appalachian Basin Province. The Marcellus Shale was assessed as a continuous gas accumulation using a methodology identical to that used in the assessment of shale and other continuous-type assessment units...
Predator biomass, prey density, and species composition effects on group size in recruit coral reef fishes
Edward E. DeMartini, Todd W. Anderson, Alan M. Friedlander, James P. Beets
2011, Marine Biology (158) 2437-2447
Group incidence and size are described for recruit parrotfishes, wrasses, and damselfishes on Hawaiian reefs over 3 years (2006–2008) at sites spanning the archipelago (20–28°N, 155–177°W). Coral-poor and coral-rich areas were surveyed at sites with both low (Hawaii Island) and high (Midway Atoll) predator densities, facilitating examination of relations among...
Role of back diffusion and biodegradation reactions in sustaining an MTBE/TBA plume in alluvial media
Ehsan Rasa, Steven W. Chapman, Barbara A. Bekins, Graham E. Fogg, Kate M. Scow, Douglas M. Mackay
2011, Journal of Contaminant Hydrology (126) 235-247
A methyl tert-butyl ether (MTBE) / tert-butyl alcohol (TBA) plume originating from a gasoline spill in late 1994 at Vandenberg Air Force Base (VAFB) persisted for over 15 years within 200 feet of the original spill source. The plume persisted until 2010 despite excavation of the tanks and piping within...
Role of climate and invasive species in structuring trout distributions in the interior Columbia River Basin, USA
Seth J. Wenger, Daniel J. Isaak, Jason B. Dunham, Kurt D. Fausch, Charles H. Luce, Helen M. Neville, Bruce E. Rieman, Michael K. Young, David E. Nagel, Dona L. Horan, Gwynne L. Chandler
2011, Canadian Journal of Fisheries and Aquatic Sciences (68) 988-1008
Recent and projected climate warming trends have prompted interest in impacts on coldwater fishes. We examined the role of climate (temperature and flow regime) relative to geomorphology and land use in determining the observed distributions of three trout species in the interior Columbia River Basin, USA. We considered two native...
The history of mammal eradications in Hawai`i and the United States associated islands of the Central Pacific
S.C. Hess, J.D. Jacobi
C.R. Veitch, M.N. Clout, D.R. Townsend, editor(s)
2011, Conference Paper, Proceedings of the International Conference on Island Invasives
Many eradications of mammal taxa have been accomplished on United States associated islands of the Central Pacific, beginning in 1910. Commonly eradicated species are rabbits (Oryctolagus cuniculus), rats (Rattus spp.), feral cats (Felis catus), and several feral ungulates from smaller islands and fenced natural areas on larger Hawaiian Islands. Vegetation...
Measurement and modeling of unsaturated hydraulic conductivity
Kim S. Perkins
Lakshmanan Elango, editor(s)
2011, Book chapter, Hydraulic conductivity - Issues, determination and applications
The unsaturated zone plays an extremely important hydrologic role that influences water quality and quantity, ecosystem function and health, the connection between atmospheric and terrestrial processes, nutrient cycling, soil development, and natural hazards such as flooding and landslides. Unsaturated hydraulic conductivity is one of the main properties considered to govern...
Denitrification rates in marsh soils and hydrologic and water quality data for Northeast Creek and Bass Harbor Marsh watersheds, Mount Desert Island, Maine
Thomas G. Huntington, Charles W. Culbertson, John H. Duff
2011, Open-File Report 2011-1252
Nutrient enrichment from atmospheric deposition, agricultural activities, wildlife, and domestic sources is a concern at Acadia National Park because of the potential problem of water-quality degradation and eutrophication in estuaries. Water-quality degradation has been observed at the park's Bass Harbor Marsh estuary but minimal degradation is observed in Northeast Creek...
Restricted growth of U-type infectious haematopoietic necrosis virus (IHNV) in rainbow trout cells may be linked to casein kinase II activity
J. W. Park, C. H. Moon, A. Harmache, A. R. Wargo, M. K. Purcell, M. Bremont, Gael Kurath
2011, Journal of Fish Diseases (34) 115-129
Previously, we demonstrated that a representative M genogroup type strain of infectious haematopoietic necrosis virus (IHNV) from rainbow trout grows well in rainbow trout‐derived RTG‐2 cells, but a U genogroup type strain from sockeye salmon has restricted growth, associated with reduced genome replication and mRNA transcription. Here, we analysed further...
Response to comments on "A bacterium that can grow using arsenic instead of phosphorus"
Felisa Wolfe-Simon, Jodi Switzer Blum, Thomas R. Kulp, Gwyneth W. Gordon, Shelley E. Hoeft, Jennifer Pett-Ridge, John F. Stolz, Samuel M. Webb, Peter K. Weber, Paul C.W. Davies, Ariel D. Anbar, Ronald S. Oremland
2011, Science (332) 1149
Concerns have been raised about our recent study suggesting that arsenic (As) substitutes for phosphorus in major biomolecules of a bacterium that tolerates extreme As concentrations. We welcome the opportunity to better explain our methods and results and to consider alternative interpretations. We maintain that our interpretation of As substitution,...
Response of lake chemistry to changes in atmospheric deposition and climate in three high-elevation wilderness areas of Colorado
M. Alisa Mast, John T. Turk, David W. Clow, Donald D. Campbell
2011, Biogeochemistry (103) 27-43
Trends in precipitation chemistry and hydrologic and climatic data were examined as drivers of long-term changes in the chemical composition of high-elevation lakes in three wilderness areas in Colorado during 1985–2008. Sulfate concentrations in precipitation decreased at a rate of −0.15 to −0.55 μeq/l/year at 10 high-elevation National Atmospheric Deposition Program...
Helicopter electromagnetic and magnetic geophysical survey data, Hunton anticline, south-central Oklahoma
Bruce D. Smith, David V. Smith, Maryla Deszcz-Pan, Charles D. Blome, Patricia Hill
2011, Open-File Report 2011-1240
This report is a digital data release for multiple geophysical surveys conducted in the Hunton anticline area of south-central Oklahoma. The helicopter electromagnetic and magnetic surveys were flown on March 16–17, 2007, in four areas of the Hunton anticline in south-central Oklahoma. The objective of this project is to improve...
Report of the River Master of the Delaware River for the period December 1, 2006–November 30, 2007
Bruce E. Krejmas, Gary N. Paulachok, Stephen F. Blanchard
2011, Open-File Report 2011-1239
A Decree of the Supreme Court of the United States, entered June 7, 1954, established the position of Delaware River Master within the U.S. Geological Survey (USGS). In addition, the Decree authorizes diversions of water from the Delaware River Basin and requires compensating releases from certain reservoirs, owned by New...