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Publication Extents

Not all publications have extents, not all extents are completely accurate
Relative seismic velocity variations correlate with deformation at Kilauea volcano
Clare Donaldson, Corentin Caudron, Robert G. Green, Weston Thelen, Robert S White
2017, Science Advances (3)
Seismic noise interferometry allows the continuous and real-time measurement of relative seismic velocity through a volcanic edifice. Because seismic velocity is sensitive to the pressurization state of the system, this method is an exciting new monitoring tool at active volcanoes. Despite the potential of this tool, no studies have yet...
New methodology for computing tsunami generation by subaerial landslides: Application to the 2015 Tyndall Glacier landslide, Alaska
David L. George, Richard M. Iverson, Charles M. Cannon
2017, Geophysical Research Letters (44) 7276-7284
Landslide-generated tsunamis pose significant hazards and involve complex, multiphase physics that are challenging to model. We present a new methodology in which our depth-averaged two-phase model D-Claw is used to seamlessly simulate all stages of landslide dynamics as well as tsunami generation, propagation, and inundation. Because the model describes the...
Wave dynamics and flooding on low-lying tropical reef-lined coasts
Ap van Dongeran, Curt D. Storlazzi, Ellen Quataert, Stuart Pearson
2017, Conference Paper, Proceedings Coastal Dynamics 2017
Many tropical islands and coasts are lined with coral reefs. These reefs are host to valuable ecosystems that support abundant marine species and provide resources for fisheries and recreation. As a flood defense, reefs protect coastlines from coastal storm damage and flooding by reducing the majority of incident wave energy. However, during...
Reproductive strategy, spawning induction, spawning temperatures and early life history of captive sicklefin chub Macrhybopsis meeki
Janice L. Albers, Mark L. Wildhaber
2017, Journal of Fish Biology (91) 58-79
Macrhybopsis reproduction and propagule traits were studied in the laboratory using two temperature regimes and three hormone treatments to determine which methods produced the most spawns. Only sicklefin chub Macrhybopsis meeki spawned successfully although sturgeon chub Macrhybopsis gelida released unfertilized eggs. All temperature and hormone treatments produced M. meeki spawns,...
Gulf Coast vulnerability assessment: Mangrove, tidal emergent marsh, barrier islands and oyster reef
Amanda Watson, Joshua Reece, Blair Tirpak, Cynthia Kallio Edwards, Laura Geselbracht, Mark Woodrey, Megan K. LaPeyre, Patricia (Soupy) Dalyander
2017, Report
Climate, sea level rise, and urbanization are undergoing unprecedented levels of combined change and are expected to have large effects on natural resources—particularly along the Gulf of Mexico coastline (Gulf Coast). Management decisions to address these effects (i.e., adaptation) require an understanding of the relative vulnerability of various resources to...
Daily reservoir sedimentation model: Case study from the Fena Valley Reservoir, Guam
Mathieu D. Marineau, Scott Wright
2017, Journal of Hydraulic Engineering (143)
A model to compute reservoir sedimentation rates at daily timescales is presented. The model uses streamflow and sediment load data from nearby stream gauges to obtain an initial estimate of sediment yield for the reservoir’s watershed; it is then calibrated to the total deposition calculated from repeat bathymetric surveys. Long-term...
Rigorously valuing the role of coral reefs in coastal protection: An example from Maui, Hawaii, U.S.A.
Curt D. Storlazzi, Borja G. Reguero, Erik Lowe, James B. Shope, Ann E. Gibbs, Mike Beck, Barry A. Nickel
2017, Conference Paper, Proceedings of Coastal Dynamics 2017
The degradation of coastal habitats, particularly coral reefs, raises risks by exposing communities to flooding hazards. The protective services of these natural defenses are not assessed in the same rigorous, economic terms as artificial defenses such as seawalls, and therefore often not considered in decision-making. Here we present a new methodology that combines...
Assessment of phytoplankton resources suitable for bigheaded carps in Lake Michigan derived from remote sensing and bioenergetics
Karl R. Anderson, Duane Chapman, Tim T. Wynne, Craig P. Paukert
2017, Journal of Great Lakes Research (43) 90-99
We used bioenergetic simulations combined with satellite-measured water temperature and estimates of algal food availability to predict the habitat suitability of Lake Michigan for adult silver carp (Hypophthalmichthys molitrix) and bighead carp (H. nobilis). Depending on water temperature, we found that bigheaded carp require ambient algal concentrations between 1 and...
Designing a solution to enable agency-academic scientific collaboration for disasters
Lindley A. Mease, Theodora Gibbs-Plessl, Ashley Erickson, K. A. Ludwig, Christopher M. Reddy, Jane Lubchenco
2017, Ecology and Society (22)
As large-scale environmental disasters become increasingly frequent and more severe globally, people and organizations that prepare for and respond to these crises need efficient and effective ways to integrate sound science into their decision making. Experience has shown that integrating nongovernmental scientific expertise into disaster decision making can improve the...
Parcels versus pixels: modeling agricultural land use across broad geographic regions using parcel-based field boundaries
Terry L. Sohl, Jordan Dornbierer, Steve Wika, Kristi L. Sayler, Robert Quenzer
2017, Journal of Land Use Science (12) 197-217
Land use and land cover (LULC) change occurs at a local level within contiguous ownership and management units (parcels), yet LULC models primarily use pixel-based spatial frameworks. The few parcel-based models being used overwhelmingly focus on small geographic areas, limiting the ability to assess LULC change impacts at regional to...
A hybrid machine learning model to predict and visualize nitrate concentration throughout the Central Valley aquifer, California, USA
Katherine M. Ransom, Bernard T. Nolan, Jonathan A. Traum, Claudia C. Faunt, Andrew M. Bell, Jo Ann M. Gronberg, David C. Wheeler, Celia Zamora, Bryant C. Jurgens, Gregory E. Schwarz, Kenneth Belitz, Sandra M. Eberts, George Kourakos, Thomas Harter
2017, Science of the Total Environment (601-602) 1160-1172
Intense demand for water in the Central Valley of California and related increases in groundwater nitrate concentration threaten the sustainability of the groundwater resource. To assess contamination risk in the region, we developed a hybrid, non-linear, machine learning model within a statistical learning framework to predict nitrate contamination of groundwater...
User’s guide for MapMark4—An R package for the probability calculations in three-part mineral resource assessments
Karl J. Ellefsen
2017, Techniques and Methods 7-C14
MapMark4 is a software package that implements the probability calculations in three-part mineral resource assessments. Functions within the software package are written in the R statistical programming language. These functions, their documentation, and a copy of this user’s guide are bundled together in R’s unit of shareable code, which is...
Probability calculations for three-part mineral resource assessments
Karl J. Ellefsen
2017, Techniques and Methods 7-C15
Three-part mineral resource assessment is a methodology for predicting, in a specified geographic region, both the number of undiscovered mineral deposits and the amount of mineral resources in those deposits. These predictions are based on probability calculations that are performed with computer software that is newly implemented. Compared to the...
The Neogene genus Streptochilus (Brönnimann and Resig, 1971) from the Gulf of California
A.Y. Miranda Martinez, A.L. Carreno, Kristin McDougall
2017, Marine Micropaleontology (132) 35-52
Four species of the planktonic foraminiferal genus Streptochilus from key Neogene marine localities are documented in relation to the evolution of the Gulf of California: S. globigerus, S. latus, S. macdougallae sp. nov., and S. inglei sp. nov. Planktonic foraminiferal bioevents and strontium isotopes in the Bouse, Tirabuzón, Carmen and...
The contribution of lakes to global inland fisheries harvest
Andrew M. Deines, David B. Bunnell, Mark W. Rogers, David Bennion, Whitney Woelmer, Michael J. Sayers, Amanda G. Grimm, Robert A. Shuchman, Zachary B. Raymer, Colin N. Brooks, Justin G. Mychek-Londer, William W. Taylor, Beard Jr.
2017, Frontiers in Ecology and the Environment (15) 293-298
Freshwater ecosystems provide numerous services for communities worldwide, including irrigation, hydropower, and municipal water; however, the services provided by inland fisheries – nourishment, employment, and recreational opportunities – are often comparatively undervalued. We provide an independent estimate of global lake harvest to improve biological and socioeconomic assessments of inland fisheries....
California Spotted Owl (Strix occidentalis occidentalis) habitat use patterns in a burned landscape
Stephanie Eyes, Susan L. Roberts, Matthew D. Johnson
2017, The Condor (119) 375-388
Fire is a dynamic ecosystem process of mixed-conifer forests of the Sierra Nevada, but there is limited scientific information addressing wildlife habitat use in burned landscapes. Recent studies have presented contradictory information regarding the effects of stand-replacing wildfires on Spotted Owls (Strix occidentalis) and their habitat. While fire promotes heterogeneous...
Light climate and dissolved organic carbon concentration influence species-specific changes in fish zooplanktivory
Brian Weidel, Katherine Baglini, Stuart E. Jones, Patrick T. Kelly, Christopher T. Solomon, Jacob A. Zwart
2017, Inland Waters (7) 210-217
Dissolved organic carbon (DOC) in lakes reduces light penetration and limits fish production in low nutrient lakes, reportedly via reduced primary and secondary production. Alternatively, DOC and light reductions could influence fish by altering their visual feeding. Previous studies report mixed effects of DOC on feeding rates of zooplanktivorous fish,...
Trace element contamination in feather and tissue samples from Anna’s hummingbirds
Nicole A. Mikoni, Robert H. Poppenga, Joshua T. Ackerman, Janet E. Foley, Jenny Hazlehurst, Guthrum Purdin, Linda Aston, Sabine Hargrave, Karen Jelks, Lisa A. Tell
2017, Ecological Indicators (80) 96-105
Trace element contamination (17 elements; Be, V, Cr, Mn, Fe, Co, Ni, Cu, Zn, As, Se, Mo, Cd, Ba, Hg, Tl, and Pb) of live (feather samples only) and deceased (feather and tissue samples) Anna's hummingbirds (Calypte anna) was evaluated. Samples were analyzed using inductively coupled plasma-mass spectrometry (ICP-MS; 17...
Essential information: Uncertainty and optimal control of Ebola outbreaks
Shou-Li Li, Ottar Bjornstad, Matthew J. Ferrari, Riley Mummah, Michael C. Runge, Christopher J. Fonnesbeck, Michael J. Tildesley, William J. M. Probert, Katriona Shea
2017, Proceedings of the National Academy of Sciences of the United States of America (114) 5659-5664
Early resolution of uncertainty during an epidemic outbreak can lead to rapid and efficient decision making, provided that the uncertainty affects prioritization of actions. The wide range in caseload projections for the 2014 Ebola outbreak caused great concern and debate about the utility of models. By coding and running 37...
U-Pb ages and geochemistry of zircon from Proterozoic plutons of the Sawatch and Mosquito ranges, Colorado, U.S.A.: Implications for crustal growth of the central Colorado province
Richard J. Moscati, Wayne R. Premo, Ed Dewitt, Joseph L. Wooden
2017, Rocky Mountain Geology (52) 17-106
A broad study of zircons from plutonic rocks of the Sawatch and Mosquito ranges of west-central Colorado (U.S.A.) was undertaken to significantly refine the magmatic chronology and chemistry of this under-studied region of the Colorado province. This region was chosen because it lies just to the north of the...
Field-trip guide to subaqueous volcaniclastic facies in the Ancestral Cascades arc in southern Washington State—The Ohanapecosh Formation and Wildcat Creek beds
Martin Jutzeler, Jocelyn McPhie
2017, Scientific Investigations Report 2017-5022-B
Partly situated in the idyllic Mount Rainier National Park, this field trip visits exceptional examples of Oligocene subaqueous volcaniclastic successions in continental basins adjacent to the Ancestral Cascades arc. The >800-m-thick Ohanapecosh Formation (32–26 Ma) and the >300-m-thick Wildcat Creek (27 Ma) beds record similar sedimentation processes from various volcanic...
Description of gravity cores from San Pablo Bay and Carquinez Strait, San Francisco Bay, California
Donald L. Woodrow, John L. Chin, Florence L. Wong, Theresa A. Fregoso, Bruce E. Jaffe
2017, Open-File Report 2017-1078
Seventy-two gravity cores were collected by the U.S. Geological Survey in 1990, 1991, and 2000 from San Pablo Bay and Carquinez Strait, California. The gravity cores collected within San Pablo Bay contain bioturbated laminated silts and sandy clays, whole and broken bivalve shells (mostly mussels), fossil tube structures, and fine-grained...
Optimal hydrograph separation using a recursive digital filter constrained by chemical mass balance, with application to selected Chesapeake Bay watersheds
Jeff P. Raffensperger, Anna C. Baker, Joel D. Blomquist, Jessica A. Hopple
2017, Scientific Investigations Report 2017-5034
Quantitative estimates of base flow are necessary to address questions concerning the vulnerability and response of the Nation’s water supply to natural and human-induced change in environmental conditions. An objective of the U.S. Geological Survey National Water-Quality Assessment Project is to determine how hydrologic systems are affected by watershed characteristics,...
Use of electricity to sedate Lake Trout for intracoelomic implantation of electronic transmitters
Matthew D. Faust, Christopher Vandergoot, Eric T. Hostnik, Thomas R. Binder, Julia L. Mida Hinderer, Jessica T. Ives, Charles C. Krueger
2017, North American Journal of Fisheries Management (37) 768-777
Use of telemetry data to inform fisheries conservation and management is becoming increasingly common; as such, fish typically must be sedated before surgical implantation of transmitters into the coelom. Given that no widely available, immediate-release chemical sedative currently exists in North America, we investigated the feasibility of using electricity to...
Streamflow alteration at selected sites in Kansas
Kyle E. Juracek, Ken Eng
2017, Scientific Investigations Report 2017-5046
An understanding of streamflow alteration in response to various disturbances is necessary for the effective management of stream habitat for a variety of species in Kansas. Streamflow alteration can have negative ecological effects. Using a modeling approach, streamflow alteration was assessed for 129 selected U.S. Geological Survey streamgages in the...