Software application for spectral mixture analysis for surveillance of harmful algal blooms (SMASH): A tool for identifying cyanobacteria genera from remotely sensed data
Carl J. Legleiter, Tyler V. King
2024, Journal of Open Research Software (JORS) (12)
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Lidar estimation of storage capacity for managed water resources used by Desert Bighorn Sheep (Ovis canadensis mexicana) at Cabeza Prieta National Wildlife Refuge, Arizona
Joel B. Sankey, Joshua Caster, Nathaniel Bransky, Stephanie Fuest, Steven Sesnie, Ashton Bedford
2024, Open-File Report 2024-1046
In cooperation with the U.S. Fish and Wildlife Service, the U.S. Geological Survey Southwest Biological Science Center employed ground-based light detection and ranging (lidar) during February 2022 to help meet two resource management objectives at the Cabeza Prieta National Wildlife Refuge (CPNWR), Arizona. The two objectives are (1) characterize the...
Thinking beyond the closure assumption: Designing surveys for estimating biological truth with occupancy models
Jonathon Joseph Valente, Vitek Jirinec, Matthias Leu
2024, Methods in Ecology and Evolution (15) 2289-2300
Occupancy models estimate distributions of imperfectly detected species, but violations of the closure assumption can bias results. However, researchers working with mobile animals may find it impossible to eliminate such violations. Here, we tested the hypothesis that occupancy models fit to realistic sampling data can generate unbiased occupancy estimates...
Amphibian monitoring in hardwood forests: Optimizing methods for contaminant‐based compensatory restorations
Bethany K. Kunz, Hardin Waddle, Nicholas S. Green
2024, Integrated Environmental Assessment and Management (20) 1939-1953
Amphibians such as frogs, toads, and salamanders provide important services in aquatic and terrestrial ecosystems and have been proposed as useful indicators of progress and success for ecological restoration projects. Limited guidance is available, however, on the costs and benefits of different amphibian monitoring techniques that might be applied to...
Paddlefish movement and dam passage in the Ohio and Kanawha Rivers, West Virginia
Stuart A. Welsh, Katherine J. Zipfel, Andrew W. Peters, David C. Hoffman, Cameron M. Layne
2024, Proceedings of the West Virginia Academy of Science (96) 12-19
The Paddlefish (Polyodon spathula), a large-bodied and highly migratory species of large river systems, has experienced population declines or extirpation in parts of its native range. As an effort to reestablish a Paddlefish population in the Ohio River of West Virginia, the West Virginia Division of Natural Resources has stocked...
Climatic drought and trophic disruption in an endemic subalpine Hawaiian forest bird
Kyle S. Van Houtan, Tyler O. Gagné, Paul C. Banko, Molly E. Hagemann, Robert W. Peck, Christopher T. Yarnes
2024, Biological Conservation (299)
Overexploitation, habitat conversion, and introduced species have caused unprecedented extinctions and heavily degraded native bird populations in island ecosystems. In the Hawaiian Islands, stemming these losses has proven difficult as the highly specialized avifauna are often impacted – among other...
Predicted occurrence of Eastern Newts (Notophthalmus viridescens viridescens) across the northeastern United States
Lindsey Pekurny, Evan H. Campbell Grant, Brittany A. Mosher
2024, Herpetologica (80) 307-313
Effective conservation is becoming more difficult as threats to wildlife increase. Natural resource managers are pressured to make difficult decisions with limited resources, and in many instances, large uncertainty. Scientists and managers tasked with the conservation of a species need tools to help guide efficient decision-making. Often, information for management...
Rappahannock tributary summary: A summary of trends in tidal water quality and associated factors, 1985-2022
Breck Maura Sullivan, Kaylyn Gootman, Alex Gunnerson, Sarah Betts, Cindy Johnson, Christopher A. Mason, Elgin Perry, Gopal Bhatt, Jennifer L. Keisman, James S. Webber, Jon Harcum, Michael F. Lane, Olivia Devereux, Qian Zhang, Rebecca Murphy, Renee Karrh, Thomas Butler, Vanessa Van Note, Angie Wei
2024, Report
The Rappahannock Tributary Summary outlines change over time for a suite of monitored tidal water quality parameters and associated potential drivers of those trends for the period of 1985 to 2022, and provides a brief description of the current state of knowledge explaining these observed changes. Water quality parameters described...
Managing water for birds— A tool for the Malheur National Wildlife Refuge
Cassandra Smith
2024, Preprint
The “Water for Birds Tool” is an Excel-based model designed for resource managers to assess the spatial extent and types of bird habitats in the Malheur National Wildlife Refuge. The model quantifies the area of open water, partial water, and water depths on a monthly timescale during the irrigation season...
From causes of conflict to solutions: Shifting the lens on human–carnivore coexistence research
Kyle Artelle, Heather E. Johnson, Rebecca McCaffery, Christopher Schell, Tyus Williams, Seth Wilson
2024, Conservation Science and Practice (6)
Human-carnivore conflicts pose significant challenges in the management and conservation of carnivores across the globe. Abundant research has led to generalizable insights into the causes of such conflicts. For example, conflicts predictably occur when carnivores have access to human food resources, particularly when their natural...
Correction to A regime shift in sediment export from a coastal watershed during a record wet winter, California: Implications for landscape response to hydroclimatic extremes
Amy E. East, Andrew W. Stevens, Andrew C. Ritchie, Patrick L. Barnard, Pamela L. Campbell‐Swarzenski, Brian D. Collins, Christopher H. Conaway
2024, Earth Surface Processes and Landforms (49) 4881-4882
In the referenced article, the authors would like to correct text in the first paragraph on page 2571, Figure 9 and its caption. The changes reflect an error made in the processing of the rainfall intensity-duration data used to compare storms to published debris flow triggering thresholds. The correctly processed...
White-backed hog-nosed skunk (Conepatus Leuconotus) occurrence in the Oklahoma panhandle
Bailey A. Kleeberg, Robert Charles Lonsinger, W. Sue Fairbanks
2024, Southwestern Naturalist (69) 1-5
The white-backed hog-nosed skunk (Conepatus leuconotus) is an understudied mesocarnivore thought to be declining throughout its range in the southwestern United States. With the exception of a single skull of unknown age, hog-nosed skunks have not been documented in Oklahoma since 1930. We conducted a camera trapping survey in Cimarron...
Evaluating hydrologic model performance for characterizing streamflow drought in the conterminous United States
Caelan Simeone, Sydney Foks, Erin Towler, Timothy O. Hodson, Thomas M. Over
2024, Water (16)
Hydrologic models are the primary tools that are used to simulate streamflow drought and assess impacts. However, there is little consensus about how to evaluate the performance of these models, especially as hydrologic modeling moves toward larger spatial domains. This paper presents a comprehensive multi-objective approach to systematically evaluating the...
Transfer learning with convolutional neural networks for hydrological streamline delineation
Nattapon Jaroenchai, Shaowen Wang, Larry Stanislawski, Ethan J. Shavers, Zhe Jiang, Vasit Sagan, E. Lynn Usery
2024, Environmental Modelling and Software (181)
Hydrological streamline delineation is critical for effective environmental management, influencing agriculture sustainability, river dynamics, watershed planning, and more. This study develops a novel approach to combining transfer learning with convolutional neural networks that capitalize on image-based pre-trained models to improve the accuracy and transferability of streamline delineation. We evaluate the...
The potential for species distribution models to distinguish source populations from sinks
Bilgecan Sen, Christian Joseph Che-Castaldo, H. Resit Akcakaya
2024, Journal of Animal Ecology (93) 1924-1934
1. While species distribution models (SDM) are frequently used to predict species occurrences to help inform conservation management, there is limited evidence evaluating whether habitat suitability can reliably predict intrinsic growth rates or distinguish source from sink populations. Filling this knowledge gap is critical for conservation science, as applications of...
Leveraging extensive soil, vegetation, fire, and land treatment data to inform restoration across the sagebrush biome
Bryan C. Tarbox, Adrian P. Monroe, Michelle I. Jeffries, Justin L. Welty, Michael S. O’Donnell, Robert Arkle, David S. Pilliod, Peter S. Coates, Julie A. Heinrichs, Daniel Manier, Cameron L. Aldridge
2024, Landscape Ecology (39)
ContextWidespread ecological degradation has prompted calls for massive global investments in ecological restoration, yet limited resources necessitate efficient application of restoration efforts. In western North America, altered fire regimes are increasing the scale of restoration needed to preserve the sagebrush (Artemisia species) biome but prioritizing and implementing effective restoration...
Produced water geochemistry from hydraulically stimulated Niobrara Formation petroleum wells: Origin of salinity and temporal perspectives on treatment and reuse
Aaron M. Jubb, Jenna L. Shelton, Bonnie McDevitt, Kaela K. Amundson, Amanda Sha Herzberg, Jessica Chenault, Andrew Laurence Masterson, Matthew S. Varonka, Glenn D. Jolly, Christina A. DeVera, Elliott Barnhart, Michael J. Wilkins, Madalyn S. Blondes
2024, Science of the Total Environment (955)
Produced water (i.e., a mixture of returned injection fluids and geologic formation brines) represents the largest volumetric waste stream associated with petroleum production in the United States. As such, produced water has been the focus of intense study with emphasis on understanding the...
New occurrences of the rare, REE minerals daqingshanite, törnebohmite, biraite, sahamalite, and ferriperbøeite from the Sheep Creek area, Montana, USA
Christopher H. Gammons, Sarah Risedorf, Gary Wyss, Heather A. Lowers
2024, Minerals (14)
Over 30 small, discontinuous, tabular carbonatite bodies are located in the Sheep Creek area, Ravalli County, southwest Montana. The age and origin of these REE-Nb-rich deposits are currently being investigated. The purpose of this paper is to document the occurrence of several rare minerals, including daqingshanite, törnebohmite, biraite, sahamalite,...
Glucocorticoid and glycemic responses to immune challenge in a viviparous snake afflicted with an emerging mycosis
Craig M. Lind, Joseph Agugliaro, Jason Ortega, Jenna N. Palmisano, Jeffrey M. Lorch, Tran Truong, Terence M. Farrell
2024, Journal of Experimental Biology (227)
Disease may be both a cause and consequence of stress, and physiological responses to infectious disease may involve stress coping mechanisms that have important fitness consequences. For example, glucocorticoid and glycemic responses may affect host fitness by altering resource allocation and use in...
Distributed volcanism—Characteristics, processes, and hazards
Michael P. Poland, Michael H. Ort, Wendy K. Stovall, R. Greg Vaughan, Charles B. Connor, M. Elise Rumpf, editor(s)
2024, Professional Paper 1890
IntroductionDistributed volcanism is defined by regions of dominantly, but not exclusively, monogenetic eruptive vents that are commonly mafic. Volcanic eruptions within distributed fields can range in composition from basalt to rhyolite and produce all types of volcanoes in all tectonic environments. This diversity in eruption composition and style reflects complex...
Temporal, spatial, and chemical evolution of Quaternary high-silica rhyolites in the Mineral Mountains, Utah
Tiffany A. Rivera, Brian R. Jicha, Stefan Kirby, Hannah B. Peacock
2024, Professional Paper 1890-K
The Mineral Mountains in southwestern Utah are a structurally controlled core complex at the confluence of the Colorado Plateau and the Basin and Range physiographic provinces. Aside from hosting Utah’s largest batholith, the Mineral Mountains host some of the State’s youngest high-silica rhyolites, which have been linked to a magma...
Vortex trapping of suspended sand grains over ripples
Donya P. Frank-Gilchrist, Allison M. Penko, Margaret L. Palmsten, Joseph Calantoni
2024, Journal of Geophysical Research: Earth Surface (129)
Coastal hydrodynamics and morphodynamics integrate the effects of small-scale fluid-sediment interactions; yet, these small-scale processes are not well understood. To investigate sediment trapping by turbulent coherent structures or vortices, the transport of coarse sand over ripples was analyzed in a small-oscillatory flow...
Detection and transport of environmental DNA from two federally endangered mussels
Brandon James Sansom, Dannise Vannesa Ruiz-Ramos, Nathan Thompson, Maura O Roberts, Zachary Taylor, Katie Ortiz, Jess W. Jones, Catherine A. Richter, Katy E. Klymus
2024, PLoS ONE (19)
Environmental DNA (eDNA) offers a novel approach to supplement traditional surveys and provide increased spatial and temporal information on species detection, and it can be especially beneficial for detecting at risk or threatened species with minimal impact on the target species. The transport of eDNA in lotic environments is an...
Reproductive ecology and egg parasitism of the Samoan swallowtail butterfly
Paul C. Banko, Mark A. Schmaedick, Robert W. Peck, Adam C. Miles, Niela Leifi
2024, Ecosphere (15)
We investigated the reproductive ecology and effects of egg parasitism on the Samoan swallowtail butterfly (Papilio godeffroyi), which survives only on Tutuila Island, American Samoa, after having disappeared from the much larger islands of Upolu and Savai‘i in independent Samoa. During monthly surveys of its only known host plant, Micromelum minutum,...
Egg size scales negatively with system size in a periodic fish species
Scott T Koenigbauer, Zachary S. Feiner, Benjamin Dickinson, Stephanie L. Shaw, Zoe Almeida, Mark Richard Dufour, Alexander James Gatch, Claire Schraidt, Tomas O. Hook
2024, Ecology and Evolution (14)
Optimal egg size theory implies that female organisms balance between fecundity and individual offspring investment according to their environment. Past interspecific studies suggest that fishes in large marine systems generally produce smaller eggs than those in small freshwater systems. We tested whether intraspecific egg size...