Effects of urban land-use on largescale stonerollers in the Mobile River Basin, Birmingham, AL
Deborah D. Iwanowicz, M.C. Black, Vicki S. Blazer, H. Zappia, Wade L. Bryant Jr.
2016, Ecotoxicology (25) 608-621
During the spring and fall of 2001 and the spring of 2002 a study was conducted to evaluate the health of the largescale stoneroller (Campostoma oligolepis) populations in streams along an urban land-use gradient. Sites were selected from a pool of naturally similar sub-basins (eco-region, basin size, and...
Temporal, geographic, and host distribution of avian paramyxovirus 1 (Newcastle disease virus)
Kiril M. Dimitrov, Andrew M. Ramey, Xueting Qiu, Justin Bahl, Claudio L. Afonso
2016, Infection, Genetics and Evolution (39) 22-34
Newcastle disease is caused by virulent forms of avian paramyxovirus of serotype 1 (APMV-1) and has global economic importance. The disease reached panzootic proportions within two decades after first being identified in 1926 in the United Kingdom and Indonesia and still remains endemic in many countries across the world. Here...
Evaluation of six NEHRP B/C crustal amplification models proposed for use in western North America
David Boore, Kenneth W. Campbell
2016, Bulletin of the Seismological Society of America (106) 673-686
We evaluate six crustal amplification models based on National Earthquake Hazards Reduction Program (NEHRP) B/C crustal profiles proposed for use in western North America (WNA) and often used in other active crustal regions where crustal properties are unknown. One of the models is based on an interpolation of generic rock...
Municipal solid waste landfills harbor distinct microbiomes
Blake W. Stamps, Christopher N. Lyles, Joseph M. Suflita, Jason R. Masoner, Isabelle M. Cozzarelli, Dana W. Kolpin, Bradley S. Stevenson
2016, Frontiers in Microbiology (7) 1-11
Landfills are the final repository for most of the discarded material from human society and its “built environments.” Microorganisms subsequently degrade this discarded material in the landfill, releasing gases (largely CH4 and CO2) and a complex mixture of soluble chemical compounds in leachate. Characterization of “landfill microbiomes” and their comparison...
Airborne pathogens from dairy manure aerial irrigation and the human health risk
Mark A. Borchardt, Tucker R Burch
2016, Report, Considerations for the use of manure irrigation practices
Dairy manure, like the fecal excrement from any domesticated or wild animal, can contain pathogens capable of infecting humans and causing illness or even death. Pathogens in dairy manure can be broadly divided into categories of taxonomy or infectiousness. Dividing by taxonomy there are three pathogen groups in dairy manure:...
Changing exhumation patterns during Cenozoic growth and glaciation of the Alaska Range: Insights from detrital thermochronology and geochronology
Richard O. Lease, Peter J. Haeussler, Paul O'Sullivan
2016, Tectonics (35) 934-955
Cenozoic growth of the Alaska Range created the highest topography in North America, but the space-time pattern and drivers of exhumation are poorly constrained. We analyzed U/Pb and fission-track double dates of detrital zircon and apatite grains from 12 catchments that span a 450 km length of the Alaska Range to...
RMT focal plane sensitivity to seismic network geometry and faulting style
Kendra L. Johnson, Gavin P. Hayes, Robert B. Herrmann, Harley M. Benz, Daniel E. McNamara, Eric A. Bergman
2016, Geophysical Journal International (206) 525-556
Modern tectonic studies often use regional moment tensors (RMTs) to interpret the seismotectonic framework of an earthquake or earthquake sequence; however, despite extensive use, little existing work addresses RMT parameter uncertainty. Here, we quantify how network geometry and faulting style affect RMT sensitivity. We examine how data-model fits change with...
Fines classification based on sensitivity to pore-fluid chemistry
Junbong Jang, J. Carlos Santamarina
2016, Journal of Geotechnical and Geoenvironmental Engineering (142) 1-8
The 75-μm particle size is used to discriminate between fine and coarse grains. Further analysis of fine grains is typically based on the plasticity chart. Whereas pore-fluid-chemistry-dependent soil response is a salient and distinguishing characteristic of fine grains, pore-fluid chemistry is not addressed in current classification systems....
Off-road vehicles affect nesting behaviour and reproductive success of American Oystercatchers Haematopus palliatus
Tracy E. Borneman, Eli T. Rose, Theodore R. Simons
2016, International Journal of Avian Science (158) 261-278
As human populations and associated development increase, interactions between humans and wildlife are occurring with greater frequency. The effects of these interactions, particularly on species whose populations are declining, are of great interest to ecologists, conservationists, land managers and natural resource policy-makers. The American Oystercatcher Haematopus palliatus, a species of...
Basin scale controls on CO2 and CH4 emissions from the Upper Mississippi River
John T. Crawford, Luke C. Loken, Emily H. Stanley, Edward G. Stets, Mark M. Dornblaser, Robert G. Striegl
2016, Geophysical Research Letters (43) 1973-1979
The Upper Mississippi River, engineered for river navigation in the 1930s, includes a series of low-head dams and navigation pools receiving elevated sediment and nutrient loads from the mostly agricultural basin. Using high-resolution, spatially resolved water quality sensor measurements along 1385 river kilometers, we show that primary productivity and organic...
Effect of phytoremediation on concentrations of benzene, toluene, naphthalene, and dissolved oxygen in groundwater at a former manufactured gas plant site, Charleston, South Carolina, USA, 1998–2014
James Landmeyer, Thomas N. Effinger
2016, Environmental Earth Sciences (75)
Concentrations of benzene, toluene, naphthalene, and dissolved oxygen in groundwater at a former manufactured gas plant site near Charleston, South Carolina, USA, have been monitored since the installation of a phytoremediation system of hybrid poplar trees in 1998. Between 2000 and 2014, the concentrations of benzene, toluene, and naphthalene (BT&N)...
Construction, calibration, and validation of the RBM10 water temperature model for the Trinity River, northern California
Edward C. Jones, Russell W. Perry, John C. Risley, Nicholas A. Som, Nicholas J. Hetrick
2016, Open-File Report 2016-1056
We constructed a one-dimensional daily averaged water-temperature model to simulate Trinity River temperatures for 1980–2013. The purpose of this model is to assess effects of water-management actions on water temperature and to provide water temperature inputs for a salmon population dynamics model. Simulated meteorological data, observed streamflow data, and...
Surveillance for highly pathogenic avian influenza virus in wild birds during outbreaks in domestic poultry, Minnesota, 2015
Christopher S. Jennelle, Michelle Carstensen, Erik C. Hildebrand, Louis Cornicelli, Paul C. Wolf, Daniel A. Grear, S. Ip, Kaci K. VanDalen, Larissa A. Minicucci
2016, Emerging Infectious Diseases (22) 1278-1282
In 2015, a major outbreak of highly pathogenic avian influenza virus (HPAIV) infection devastated poultry facilities in Minnesota, USA. To clarify the role of wild birds, we tested 3,139 waterfowl fecal samples and 104 sick and dead birds during March 9–June 4, 2015. HPAIV was isolated from a Cooper’s hawk...
Temporal and spatial patterns of wetland extent influence variability of surface water connectivity in the Prairie Pothole Region, United States
Melanie K. Vanderhoof, Laurie C. Alexander, Jason Todd
2016, Landscape Ecology (31) 805-824
Context. Quantifying variability in landscape-scale surface water connectivity can help improve our understanding of the multiple effects of wetlands on downstream waterways. Objectives. We examined how wetland merging and the coalescence of wetlands with streams varied both spatially (among ecoregions) and interannually (from drought to deluge) across parts of the...
Assessment of undiscovered oil and gas resources of the Taoudeni Basin Province, Mali and Mauritania, 2015
Michael E. Brownfield, Christopher J. Schenk, Timothy R. Klett, Marilyn E. Tennyson, Janet K. Pitman, Stephanie B. Gaswirth, Phuong A. Le, Heidi M. Leathers-Miller, Tracey J. Mercier, Kristen R. Marra, Sarah J. Hawkins
2016, Fact Sheet 2016-3003
Using a geology-based assessment methodology, the U.S. Geological Survey estimated undiscovered, technically recoverable mean resources of 160 million barrels of conventional oil, 1,880 billion cubic feet of conventional gas, 602 million barrels of shale oil, and 6,395 billion cubic feet of shale gas in the Taoudeni Basin Province in Mali...
Energetic costs of mange in wolves estimated from infrared thermography
Paul C. Cross, Emily S. Almberg, Catherine G Haase, Peter J. Hudson, Shane K Maloney, Matthew C Metz, Adam J Munn, Paul Nugent, Olivier Putzeys, Daniel R. Stahler, Anya C Stewart, Doug W. Smith
2016, Ecology (97) 1938-1948
Parasites, by definition, extract energy from their hosts and thus affect trophic and food web dynamics even when the parasite may have limited effects on host population size. We studied the energetic costs of mange (Sarcoptes scabiei) in wolves (Canis lupus) using thermal cameras to estimate heat losses associated with...
DNA and dispersal models highlight constrained connectivity in a migratory marine megavertebrate
Eugenia Naro-Maciel, Kristen M. Hart, Rossana Cruciata, Nathan Freeman Putman
2016, Ecography (40) 586-597
Population structure and spatial distribution are fundamentally important fields within ecology, evolution, and conservation biology. To investigate pan-Atlantic connectivity of globally endangered green turtles (Chelonia mydas) from two National Parks in Florida, USA, we applied a multidisciplinary approach comparing genetic analysis and ocean circulation modeling. The Everglades (EP) is a...
Conditional vulnerability of plant diversity to atmospheric nitrogen deposition across the United States
Samuel M. Simkin, Edith B. Allen, William D. Bowman, Christopher L. Clark, Jayne Belnap, Matthew L. Brooks, Brian S. Cade, Scott L. Collins, Linda H. Geiser, Frank S. Gilliam, Sarah E. Jovan, Linda H. Pardo, Bethany K. Schulz, Carly J. Stevens, Katharine N. Suding, Heather L. Throop, Donald M. Waller
2016, PNAS (113) 4086-4091
Atmospheric nitrogen (N) deposition has been shown to decrease plant species richness along regional deposition gradients in Europe and in experimental manipulations. However, the general response of species richness to N deposition across different vegetation types, soil conditions, and climates remains largely unknown even though responses may be contingent on...
Habitat selection by green turtles in a spatially heterogeneous benthic landscape in Dry Tortugas National Park, Florida
Ikuko Fujisaki, Kristen M. Hart, Autumn R. Sartain-Iverson
2016, Aquatic Biology (24) 185-199
We examined habitat selection by green turtles Chelonia mydas at Dry Tortugas National Park, Florida, USA. We tracked 15 turtles (6 females and 9 males) using platform transmitter terminals (PTTs); 13 of these turtles were equipped with additional acoustic transmitters. Location data by PTTs comprised periods of 40 to 226...
Normal streamflows and water levels continue—Summary of hydrologic conditions in Georgia, 2014
Andrew E. Knaak, Paul D. Ankcorn, Michael F. Peck
2016, Fact Sheet 2016-3016
The U.S. Geological Survey (USGS) South Atlantic Water Science Center (SAWSC) Georgia office, in cooperation with local, State, and other Federal agencies, maintains a long-term hydrologic monitoring network of more than 350 real-time, continuous-record, streamflow-gaging stations (streamgages). The network includes 14 real-time lake-level monitoring stations, 72 real-time surface-water-quality monitors, and...
The Galapagos archipelago: A natural laboratory to examine sharp hydroclimatic, geologic and anthropogenic gradients
Madelyn Percy, Sarah Schmitt, Diego Riveros-Iregui, Benjamin B. Mirus
2016, WIREs Water (3) 587-600
Poor understanding of the water cycle in tropical ecosystems has the potential to exacerbate water shortages and water crises in the region. We suggest that the Galápagos Islands provide an excellent proxy to regions across the tropics as a result of sharp hydroclimatic, anthropogenic, and pedohydrologic gradients across the archipelago....
Young of the year bluefish (Pomatomus saltatrix) as a bioindicator of estuarine health: Establishing a new baseline for persistent organic pollutants after Hurricane Sandy for selected estuaries in New Jersey and New York
Kelly L. Smalling, Ashok D. Deshpande, Vicki S. Blazer, Bruce W Dockum, DeMond Timmons, Beth L. Sharack, Ronald J. Baker, Jennifer Samson, Timothy J. Reilly
2016, Marine Pollution Bulletin (107) 422-431
Atlantic coastal bays of the US are essential habitat for young of year bluefish (Pomatomus saltatrix). Their residence in these estuaries during critical life stages, high lipid content, and piscivory make bluefish an ideal bioindicator species for evaluating estuarine health. Individual whole fish from four estuaries impacted by Hurricane Sandy...
Hydrologic Conditions in Kansas, water year 2015
Madison R. May
2016, Fact Sheet 2016-3015
The U.S. Geological Survey (USGS), in cooperation with Federal, State, and local agencies, maintains a long-term network of hydrologic monitoring sites in Kansas. In 2015, the network included about 200 real-time streamgages (hereafter referred to as “gages”), 12 real-time reservoir-level monitoring stations, and 30 groundwater-level monitoring wells. These data and...
Relationships between diatoms and tidal environments in Oregon and Washington, USA
Yuki Sawai, Benjamin P. Horton, Andrew C. Kemp, Andrea D. Hawkes, Tamostsu Nagumo, Alan R. Nelson
2016, Diatom Research (31) 17-38
A new regional dataset comprising 425 intertidal diatom taxa from 175 samples from 11 ecologically diverse Oregon and Washington estuaries illustrates the importance of compiling a large modern dataset from a range of sites. Cluster analyses and detrended correspondence analysis of the diatom assemblages identify distinct vertical zones within supratidal,...
Towards establishing compact imaging spectrometer standards
E. Terrence Slonecker, David W. Allen, Ronald G. Resmini
2016, International Journal of Experimental Spectroscopic Techniques (1)
Remote sensing science is currently undergoing a tremendous expansion in the area of hyperspectral imaging (HSI) technology. Spurred largely by the explosive growth of Unmanned Aerial Vehicles (UAV), sometimes called Unmanned Aircraft Systems (UAS), or drones, HSI capabilities that once required access to one of only a handful of very...