Contact and contagion: Probability of transmission given contact varies with demographic state in bighorn sheep
Kezia R. Manlove, E. Frances Cassirer, Raina K. Plowright, Paul C. Cross, Peter J. Hudson
2017, Journal of Animal Ecology (86) 908-920
Understanding both contact and probability of transmission given contact are key to managing wildlife disease. However, wildlife disease research tends to focus on contact heterogeneity, in part because the probability of transmission given contact is notoriously difficult to measure. Here, we present a first step towards empirically...
A suite of standard post-tagging evaluation metrics can help assess tag retention for field-based fish telemetry research
Kayla M. Gerber, Martha E. Mather, Joseph M. Smith
2017, Reviews in Fish Biology and Fisheries (27) 651-664
Telemetry can inform many scientific and research questions if a context exists for integrating individual studies into the larger body of literature. Creating cumulative distributions of post-tagging evaluation metrics would allow individual researchers to relate their telemetry data to other studies. Widespread reporting of standard metrics is a precursor to...
New zircon (U-Th)/He and U/Pb eruption age for the Rockland tephra, western USA
Matthew A. Coble, Seth D. Burgess, Erik W. Klemetti
2017, Quaternary Science Reviews (172) 109-117
Eruption ages of a number of prominent Quaternary volcanic deposits remain inaccurately and/or imprecisely constrained, despite their importance as regional stratigraphic markers in paleo-environment reconstruction and as evidence of climate-altering eruptions. Accurately dating volcanic deposits presents challenging analytical considerations, including poor radiogenic yield, scarcity of datable minerals, and contamination of...
Interactive effects of deer exclusion and exotic plant removal on deciduous forest understory communities
Norman Bourg, William J. McShea, Valentine Herrmann, Chad M. Stewart
2017, AoB PLANTS (9) 1-16
Mammalian herbivory and exotic plant species interactions are an important ongoing research topic, due to their presumed impacts on native biodiversity. The extent to which these interactions affect forest understory plant community composition and persistence was the subject of our study. We conducted a 5-year, 2 × 2 factorial experiment...
Assessment of forest degradation in Vietnam using Landsat time series data
James Vogelmann, Phung Van Khoa, Xuan Lan, Jacob S. Shermeyer, Hua Shi, Michael C. Wimberly, Hoang Tat Duong, Le Van Huong
2017, Forests (8) 1-22
Landsat time series data were used to characterize forest degradation in Lam Dong Province, Vietnam. We conducted three types of image change analyses using Landsat time series data to characterize the land cover changes. Our analyses concentrated on the timeframe of 1973–2014, with much emphasis on the latter part of...
Crossing boundaries in a collaborative modeling workspace
Jeffrey T. Morisette, Amanda E. Cravens, Brian W. Miller, Marian Talbert, Colin Talbert, Catherine S. Jarnevich, Michelle Fink, Karin Decker, Eric Odell
2017, Society and Natural Resources (30) 1158-1167
There is substantial literature on the importance of bridging across disciplinary and science–management boundaries. One of the ways commonly suggested to cross boundaries is for participants from both sides of the boundary to jointly produce information (i.e., knowledge co-production). But simply providing tools or bringing people together in the same...
Effects of breeder turnover and harvest on group composition and recruitment in a social carnivore
David E. Ausband, Michael S. Mitchell, Lisette P. Waits
2017, Journal of Animal Ecology (86) 1094-1101
Breeder turnover can influence population growth in social carnivores through changes to group size, composition and recruitment.Studies that possess detailed group composition data that can provide insights about the effects of breeder turnover on groups have generally been conducted on species that are not subject to recurrent...
Comparison of acoustic recorders and field observers for monitoring tundra bird communities
Skyler T. Vold, Colleen M. Handel, Lance B. McNew
2017, Wildlife Society Bulletin (41) 566-576
Acoustic recorders can be useful for studying bird populations but their efficiency and accuracy should be assessed in pertinent ecological settings before use. We investigated the utility of an acoustic recorder for monitoring abundance of tundra‐breeding birds relative to point‐count surveys in northwestern Alaska, USA, during 2014. Our objectives were...
Extension of the analytical window for characterizing aromatic compounds in oils using a comprehensive suite of high-resolution mass spectrometry techniques and double bond equivalence versus carbon number plot
Yunju Cho, Justin E. Birdwell, Manhoi Hur, Joonhee Lee, Byungjoo Kim, Sunghwan Kim
2017, Energy & Fuels (31) 7874-7883
In this study, comprehensive two-dimensional (2D) gas chromatography–mass spectrometry (GC–MS), atmospheric pressure photoionization (APPI) quadrupole-Orbitrap mass spectrometry (MS), and Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) were used to study the aromatic fractions of crude oil and oil shale pyrolysates (shale oils). The collected data were compared and...
Hydrologic regimes as potential drivers of morphologic divergence in fish
Lindsey Bruckerhoff, Daniel D. Magoulick
2017, Evolutionary Ecology (31) 517-531
Fishes often exhibit phenotypic divergence across gradients of abiotic and biotic selective pressures. In streams, many of the known selective pressures driving phenotypic differentiation are largely influenced by hydrologic regimes. Because flow regimes drive so many attributes of lotic systems, we hypothesized fish exhibit phenotypic divergence among streams with different...
Long-term dynamics and characteristics of snags created for wildlife habitat
Amy M. Barry, Joan Hagar, James W. Rivers
2017, Forest Ecology and Management (403) 145-151
Snags provide essential habitat for numerous organisms and are therefore critical to the long-term maintenance of forest biodiversity. Resource managers often use snag creation to mitigate the purposeful removal of snags at the time of harvest, but information regarding how created snags change over long timescales (>20 y) is absent from...
Biotic and abiotic factors influencing zooplankton vertical distribution in Lake Huron
Carly J. Nowicki, David B. Bunnell, Patricia M. Dieter, David M. Warner, Henry A. Vanderploeg, Joann F. Cavaletto, Christine M. Mayer, Jean V. Adams
2017, Journal of Great Lakes Research (43) 1044-1054
The vertical distribution of zooplankton can have substantial influence on trophic structure in freshwater systems, particularly by determining spatial overlap for predator/prey dynamics and influencing energy transfer. The zooplankton community in some of the Laurentian Great Lakes has undergone changes in composition and declines in total biomass, especially after 2003....
Maintenance of influenza A viruses and antibody response in mallards (Anas platyrhynchos) sampled during the non-breeding season in Alaska
Timothy J. Spivey, Mark S. Lindberg, Brandt W. Meixell, Kyle R. Smith, Wendy Blay Puryear, Kimberly R. Davis, Jonathan A. Runstadler, David E. Stallknecht, Andrew M. Ramey
2017, PLoS ONE (12)
Prevalence of influenza A virus (IAV) infections in northern-breeding waterfowl has previously been reported to reach an annual peak during late summer or autumn; however, little is known about IAV infection dynamics in waterfowl populations persisting at high-latitude regions such as Alaska, during winter. We captured mallards (Anas platyrhynchos) throughout...
Small mammals as indicators of climate, biodiversity, and ecosystem change
Andrew G. Hope, Eric Waltari, Nathan R. Morse, M.J. Flamme, Sandra L. Talbot, Joseph A. Cook
2017, Alaska Park Science (16) 72-78
Climate is a driving evolutionary force for biodiversity in high-latitude Alaska. This region is complex and dynamic with high annual variation in temperature and light. Through deeper time, Alaska has experienced major climate extremes over much longer periodicity. For example, the Quaternary Period (the last ~2.5 million years), commonly known...
Satellite-tagged osprey nearly sets longevity record and productivity response to initial captures
Charles J. Henny, Mark S. Martell
2017, Journal of Raptor Research (51) 180-183
We equipped adult Ospreys (Pandion haliaetus) from 24 nests in Oregon/Washington with satellite-tracked battery-powered radios, known as platform transmitter terminals (PTTs), in 1996–1999. These Ospreys from the lower Columbia River (river miles 76–286), and the Willamette Valley in western Oregon were part of a larger study of Osprey fall migration,...
Landscape complementation revealed through bipartite networks: An example with the Florida manatee
Catherine G. Haase, Robert J. Fletcher, Daniel H. Slone, James P. Reid, Susan M. Butler
2017, Landscape Ecology (32) 1999-2014
Context Landscape complementation, or how landscapes that contain two or more non-substitutable and spatially separated resources facilitate resource use, is critical for many populations. Implicit to the problem of landscape complementation is the movement of individuals to access multiple resources. Conventional measures of complementation, such as habitat area or distance between...
Frequencies of decision making and monitoring in adaptive resource management
Byron K. Williams, Fred A. Johnson
2017, PLoS ONE (12)
Adaptive management involves learning-oriented decision making in the presence of uncertainty about the responses of a resource system to management. It is implemented through an iterative sequence of decision making, monitoring and assessment of system responses, and incorporating what is learned into future decision making. Decision making at each point...
Timescales of mixing and storage for Keanakāko‘i Tephra magmas (1500-1823 C.E.), Kīlauea Volcano, Hawai‘i
Kendra J. Lynn, Michael O. Garcia, Thomas Shea, Fidel Costa, Donald A. Swanson
2017, Contributions to Mineralogy and Petrology (172)
The last 2500 years of activity at Kīlauea Volcano (Hawai‘i) have been characterized by centuries-long periods dominated by either effusive or explosive eruptions. The most recent period of explosive activity produced the Keanakāko‘i Tephra (KT; ca. 1500–1820 C.E.) and occurred after the collapse of the summit caldera (1470–1510 C.E.). Previous studies...
Evidence of compounded disturbance effects on vegetation recovery following high-severity wildfire and spruce beetle outbreak
Amanda R. Carlson, Jason S. Sibold, Timothy J. Assal, Jose F. Negron
2017, PLoS ONE (12)
Spruce beetle (Dendroctonus rufipennis) outbreaks are rapidly spreading throughout subalpine forests of the Rocky Mountains, raising concerns that altered fuel structures may increase the ecological severity of wildfires. Although many recent studies have found no conclusive link between beetle outbreaks and increased fire size or canopy mortality, few studies have...
Abundant carbon substrates drive extremely high sulfate reduction rates and methane fluxes in Prairie Pothole Wetlands
Paula Martins, David W. Hoyt, Sheel Bansal, Christopher T. Mills, Malak Tfaily, Brian Tangen, Raymond Finocchiaro, Michael D. Johnston, Brandon C. McAdams, Matthew J. Solensky, Garrett J. Smith, Yu-Ping Chin, Michael J. Wilkins
2017, Global Change Biology (23) 3107-3120
Inland waters are increasingly recognized as critical sites of methane emissions to the atmosphere, but the biogeochemical reactions driving such fluxes are less well understood. The Prairie Pothole Region (PPR) of North America is one of the largest wetland complexes in the world, containing millions of small, shallow wetlands. The...
Using optimal transport theory to estimate transition probabilities in metapopulation dynamics
Jonathan M. Nichols, Jeffrey A. Spendelow, James D. Nichols
2017, Ecological Modelling (359) 311-319
This work considers the estimation of transition probabilities associated with populations moving among multiple spatial locations based on numbers of individuals at each location at two points in time. The problem is generally underdetermined as there exists an extremely large number of ways in which individuals can move from one...
Water quality measurements in San Francisco Bay by the U.S. Geological Survey, 1969–2015
Tara Schraga, James E. Cloern
2017, Scientific Data (4)
The U.S. Geological Survey (USGS) maintains a place-based research program in San Francisco Bay (USA) that began in 1969 and continues, providing one of the longest records of water-quality measurements in a North American estuary. Constituents include salinity, temperature, light extinction coefficient, and concentrations of chlorophyll-a, dissolved oxygen, suspended particulate...
Hierarchical, quantitative biogeographic provinces for all North American turtles and their contribution to the biogeography of turtles and the continent
Joshua R. Ennen, Wilfredo A. Matamoros, Mickey Agha, Jeffrey E. Lovich, Sarah C. Sweat, Christopher W. Hoagstrom
2017, Herpetological Monographs (31) 114-140
Our study represents the first attempt to describe biogeographic provinces for North American (México, United States, and Canada) turtles. We analyzed three nested data sets separately: (1) all turtles, (2) freshwater turtles, and (3) aquatic turtles. We georeferenced North American turtle distributions, then we created presence–absence matrices for each of...
Combining multiple earthquake models in real time for earthquake early warning
Sarah E. Minson, Stephen Wu, James L Beck, Thomas H. Heaton
2017, Bulletin of the Seismological Society of America (107) 1868-1882
The ultimate goal of earthquake early warning (EEW) is to provide local shaking information to users before the strong shaking from an earthquake reaches their location. This is accomplished by operating one or more real‐time analyses that attempt to predict shaking intensity, often by estimating the earthquake’s location and magnitude...
Report from the Workshop on Coregonine Restoration Science
Charles R. Bronte, David B. Bunnell, Solomon R. David, Roger Gordon, Dimitry Gorsky, Mike Millard, Jennifer Read, Roy A. Stein, Lynn Vaccaro
2017, Open-File Report 2017-1081
SummaryGreat Lakes fishery managers have the opportunity and have expressed interest in reestablishing a native forage base in the Great Lakes consisting of various forms and species within the genus Coregonus. This report summarizes the proceedings of a workshop focused on a subset of the genus, and the term “coregonines”...