External quality assurance project report for the National Atmospheric Deposition Program’s National Trends Network and Mercury Deposition Network, 2013–14
Gregory A. Wetherbee, RoseAnn Martin
2016, Scientific Investigations Report 2016-5069
The U.S. Geological Survey Branch of Quality Systems operated five distinct programs to provide external quality assurance monitoring for the National Atmospheric Deposition Program’s (NADP) National Trends Network and Mercury Deposition Network during 2013–14. The National Trends Network programs include (1) a field audit program to evaluate sample contamination and...
Introduction to special issue on carbon and landscape dynamics
Mary Ann Madej, Ellen E. Wohl
2016, Earth Surface Processes and Landforms (41) 1790-1792
In October, 2013, at the Geological Society of America annual meeting, a theme session focused on carbon and landscape dynamics. That event led to interest in producing a special issue in ESPL compiling papers on this subject. The 13 papers collected for this special issue reflect the diversity of recent...
A goodness-of-fit test for occupancy models with correlated within-season revisits
Wilson Wright, Kathryn M. Irvine, Thomas J. Rodhouse
2016, Ecology and Evolution (6) 5404-5415
Occupancy modeling is important for exploring species distribution patterns and for conservation monitoring. Within this framework, explicit attention is given to species detection probabilities estimated from replicate surveys to sample units. A central assumption is that replicate surveys are independent Bernoulli trials, but this assumption becomes untenable when ecologists serially...
Adverse reproductive and developmental health outcomes following prenatal exposure to a 2 hydraulic fracturing chemical mixture in female C57Bl/6 mice
Christopher D. Kassotis, John J. Bromfield, Kara C. Klemp, Chun-Xia Meng, Andrew R. Wolfe, Thomas Zoeller, Victoria D. Balise, Chiamaka J. Isiguzo, Donald E. Tillitt, Susan C. Nagel
2016, Endocrinology (157) 3469-3481
Unconventional oil and gas operations using hydraulic fracturing can contaminate surface and groundwater with endocrine-disrupting chemicals. We have previously shown that 23 of 24 commonly used hydraulic fracturing chemicals can activate or inhibit the estrogen, androgen, glucocorticoid, progesterone, and/or thyroid receptors in a human endometrial cancer cell reporter gene assay...
Preserving reptiles for research
Steve W. Gotte, Jeremy F. Jacobs, George R. Zug
C. Kenneth Dodd, editor(s)
2016, Book chapter, Reptile ecology and conservation
What are voucher specimens and why do we collect them? Voucher specimens are animals and/or their parts that are deposited in a research museum to document the occurrence of a taxon at a specific location in space and time (Pleijel et al., 2008; Reynolds and McDiarmid, 2012). For field biologists,...
Experimental whole-lake increase of dissolved organic carbon concentration produces unexpected increase in crustacean zooplankton density
Patrick T. Kelly, Nicola Craig, Christopher T. Solomon, Brian Weidel, Jacob A. Zwart, Stuart E. Jones
2016, Global Change Biology (22) 2766-2775
The observed pattern of lake browning, or increased terrestrial dissolved organic carbon (DOC) concentration, across the northern hemisphere has amplified the importance of understanding how consumer productivity varies with DOC concentration. Results from comparative studies suggest these increased DOC concentrations may reduce crustacean zooplankton productivity due to reductions in resource...
Implications of climate change for wetland-dependent birds in the Prairie Pothole Region
Valerie Steen, Susan K. Skagen, Cynthia P. Melcher
2016, Wetlands (36) 445-459
The habitats and food resources required to support breeding and migrant birds dependent on North American prairie wetlands are threatened by impending climate change. The North American Prairie Pothole Region (PPR) hosts nearly 120 species of wetland-dependent birds representing 21 families. Strategic management requires knowledge of avian habitat requirements and...
Blood selenium concentrations in female Pacific black brant molting in Arctic Alaska: Relationships with age and habitat salinity
J. Christian Franson, Paul L. Flint, Joel A. Schmutz
2016, Marine Pollution Bulletin (111) 453-455
Blood samples collected from 81 female Pacific black brant (Branta bernicla nigricans) molting near Teshekpuk Lake, Alaska, were analyzed for selenium concentration. The concentration of selenium in blood of after second year (hatched two or more years ago) females (0.84 μg/g wet weight) was significantly greater than the concentration in second...
Extraordinary sediment delivery and rapid geomorphic response following the 2008–2009 eruption of Chaitén Volcano, Chile
Jon J. Major, Daniel Bertin, Thomas C. Pierson, Alvaro Amigo, Andres Iroume, Hector Ulloa, Jonathan M. Castro
2016, Water Resources Research (52) 5075-5094
The 10 day explosive phase of the 2008–2009 eruption of Chaitén volcano, Chile, draped adjacent watersheds with a few cm to >1 m of tephra. Subsequent lava-dome collapses generated pyroclastic flows that delivered additional sediment. During the waning phase of explosive activity, modest rainfall triggered an extraordinary sediment flush which...
A framework for effective use of hydroclimate models in climate-change adaptation planning for managed habitats with limited hydrologic response data
Rachel A. Esralew, Lorraine E. Flint, James H. Thorne, Ryan Boynton, Alan L. Flint
2016, Environmental Management (58) 60-75
Climate-change adaptation planning for managed wetlands is challenging under uncertain futures when the impact of historic climate variability on wetland response is unquantified. We assessed vulnerability of Modoc National Wildlife Refuge (MNWR) through use of the Basin Characterization Model (BCM) landscape hydrology model, and six global climate models, representing projected...
Hepatic insulin-like growth-factor binding protein (igfbp) responses tofood restriction in Atlantic salmon smolts
Jason P. Breves, Silas K. Phipps-Costin, Chelsea K. Fujimoto, Ingibjorg E. Einarsdottir, Amy M. Regish, Björn Thrandur Björnsson, Stephen D. McCormick
2016, General and Comparative Endocrinology (233) 79-87
The growth hormone (Gh)/insulin-like growth-factor (Igf) system plays a central role in the regulation of growth in fishes. However, the roles of Igf binding proteins (Igfbps) in coordinating responses to food availability are unresolved, especially in anadromous fishes preparing for seaward migration. We assayed plasma Gh, Igf1, thyroid hormones and...
Anadromous salmonids in the Delta: New science 2006–2016
Russell W. Perry, Rebecca A. Buchanan, Patricia L. Brandes, Jon R. Burau, Joshua A Israel
2016, San Francisco Estuary and Watershed Science (14)
As juvenile salmon enter the Sacramento–SanJoaquin River Delta (“the Delta”) they disperse among its complex channel network where they are subject to channel-specific processes that affect their rate of migration, vulnerability to predation, feeding success, growth rates, and ultimately, survival. In the decades...
Assessing landslide potential on coastal bluffs near Mukilteo, Washington—Geologic site characterization for hydrologic monitoring
Benjamin B. Mirus, Joel B. Smith, Benjamin Stark, York Lewis, Abigail Michel, Rex L. Baum
2016, Open-File Report 2016-1082
During the summer 2015, the U.S. Geological Survey collected geologic and geotechnical data for two sites on coastal bluffs along the eastern shore of Puget Sound, Washington. The U.S. Geological Survey also installed hydrologic instrumentation at the sites and collected specimens for laboratory testing. The two sites are located on...
Tick-, mosquito-, and rodent-borne parasite sampling designs for the National Ecological Observatory Network
Yuri P. Springer, David Hoekman, Pieter T. J. Johnson, Paul A. Duffy, Rebecca A. Hufft, David T. Barnett, Brian F. Allan, Brian R. Amman, Christopher M. Barker, Roberto Barrera, Charles B. Beard, Lorenza Beati, Mike Begon, Mark S. Blackmore, William E. Bradshaw, Dustin Brisson, Charles H. Calisher, James E. Childs, Maria A. Diuk-Wasser, Richard J. Douglass, Rebecca J. Eisen, Desmond H. Foley, Janet E. Foley, Holly D. Gaff, Scott L. Gardner, Howard S. Ginsberg, Gregory E. Glass, Sarah A. Hamer, Mary H. Hayden, Brian Hjelle, Christina M. Holzapfel, Steven A. Juliano, Laura D. Kramer, Amy J. Kuenzi, Shannon L. LaDeau, Todd P. Livdahl, James N. Mills, Chester G. Moore, Serge Morand, Roger S. Nasci, Nicholas H. Ogden, Richard S. Ostfeld, Robert R. Parmenter, Joseph Piesman, William K. Reisen, Harry M. Savage, Daniel E. Sonenshine, Andrea Swei, Michael J. Yabsley
2016, Ecosphere (7)
Parasites and pathogens are increasingly recognized as significant drivers of ecological and evolutionary change in natural ecosystems. Concurrently, transmission of infectious agents among human, livestock, and wildlife populations represents a growing threat to veterinary and human health. In light of these trends and the scarcity of long-term time series data...
Large wind ripples on Mars: A record of atmospheric evolution
M. G. A. Lapotre, R. C. Ewing, M. P. Lamb, W. W. Fischer, J. P. Grotzinger, D. M. Rubin, K. W. Lewis, M. J. Ballard, Mitch D. Day, S. Gupta, S. G. Banham, N. T. Bridges, D. J. Des Marais, A. A. Fraeman, J. A. Grant, Kenneth E. Herkenhoff, D. W. Ming, M. A. Mischna, M. S. Rice, D. Y. Sumner, A. R. Vasavada, R. A. Yingst
2016, Science (353) 55-58
Wind blowing over sand on Earth produces decimeter-wavelength ripples and hundred-meter– to kilometer-wavelength dunes: bedforms of two distinct size modes. Observations from the Mars Science Laboratory Curiosity rover and the Mars Reconnaissance Orbiter reveal that Mars hosts a third stable wind-driven bedform, with meter-scale wavelengths. These bedforms are spatially uniform...
Esperance: Multiple episodes of aqueous alteration involving fracture fills and coatings at Matijevic Hill, Mars
Benton C. Clark, Richard V. Morris, Kenneth E. Herkenhoff, William H. Farrand, Ralf Gellert, Bradley L. Jolliff, Raymond E. Arvidson, Steven W. Squyres, David W. Mittelfehldt, Douglas W. Ming, Albert S. Yen
2016, American Mineralogist (101) 1515-1526
In the search for evidence of past aqueous activity by the Mars Exploration Rover Opportunity, fracture-filling veins and rock coatings are prime candidates for exploration. At one location within a segment of remaining rim material surrounding Endeavour Crater, a set of “boxwork” fractures in an outcrop called Esperance are filled...
Exploration review
David R. Wilburn, Nick Karl
2016, Mining Engineering 30-51
This summary of international mineral exploration activities for the year 2015 draws upon information from industry sources, published literature, the SNL Metals & Mining (SNL) (Charlottesville, VA) data base, and specialists in the U.S. Geological Survey (USGS) National Minerals Information Center. The summary provides data on exploration budgets by region...
A water balance model to estimate flow through the Old and Middle River corridor
Stephen W. Andrews, Edward S. Gross, Paul H. Hutton
2016, San Francisco Estuary and Watershed Science (14)
We applied a water balance model to predict tidally averaged (subtidal) flows through the Old River and Middle River corridor in the Sacramento–San Joaquin Delta. We reviewed the dynamics that govern subtidal flows and water levels and adopted a simplified representation. In this water balance approach, we estimated...
Accretionary lapilli: what’s holding them together?
Paul M. Adams, David K. Lynch, David C. Buesch
2016, Conference Paper, Going LOCO: Investigations along the Lower Colorado River: 2016 Desert Symposium Field Guide and Proceedings
Accretionary lapilli from Tagus cone, Isla Isabela, Galápagos were analyzed using scanning electron microscope (SEM) and energy-dispersive X-ray spectroscopy (EDS) techniques. Our main findings are (1) the lapilli formed and hardened in a few minutes while still aloft in the dispersing eruption column. (2) Palagonite rinds developed first on the...
Architecture, geochemistry, and paleomagnetic directions of the 5.42 Ma Broadwell Mesa basalt volcanic field, Bristol Mountains, California
David C. Buesch, Geoffrey Phelps
2016, Conference Paper, Going LOCO: Investigations along the Lower Colorado River: 2016 Desert Symposium Field Guide and Proceedings
No abstract available....
Acoustic surveys of Hawaiian Hoary Bats in Kahikinui Forest Reserve and Nakula Natural Area Reserve on the Island of Maui
Christopher M. Todd, Corinna A. Pinzari, Frank Bonaccorso
2016, Hawai‘i Cooperative Studies Unit Technical Report HCSU-078
The Kahikinui Forest Reserve and the adjoining Nakula Natural Area Reserve (KFR-NNAR) was established in 2011 as a conservation area on the leeward slope of Haleakalā Volcano on the island of Maui to protect unique natural features and endangered species including the Hawaiian hoary bat, Lasiurus cinereus semotus. We recorded...
Detection and quantification of hydrocarbons in sediments
Jeff Wynn, Mike Williamson, Jeff Frank
2016, Conference Paper, OCEANS 2016 MTS/IEEE Monterey
A new technology developed by the US Geological Survey now allows for fast, direct detection of hydrocarbon plumes both in rivers and drifting in the deep ocean. Recent experiments show that the method can also detect and quantify hydrocarbons buried in river sediments and estuaries. This approach uses a variant...
Bayesian nitrate source apportionment to individual groundwater wells in the Central Valley by use of elemental and isotopic tracers
Katherine M Ransom, Mark N. Grote, Amanda Deinhart, Gary Eppich, Carol Kendall, Matthew E. Sanborn, A. Kate Sounders, Joshua Wimpenny, Qing-zhu Yin, Megan B. Young, Thomas Harter
2016, Water Resources Research (52) 5577-5597
Groundwater quality is a concern in alluvial aquifers that underlie agricultural areas, such as in the San Joaquin Valley of California. Shallow domestic wells (less than 150 m deep) in agricultural areas are often contaminated by nitrate. Agricultural and rural nitrate sources include dairy manure, synthetic fertilizers, and septic waste....
Tracking the timing of subduction and exhumation using 40Ar/39Ar phengite ages in blueschist- and eclogite-facies rocks (Sivrihisar, Turkey)
Katherine F. Fornash, Michael A. Cosca, Donna L. Whitney
2016, Contributions to Mineralogy and Petrology (171) 1-37
Geochronologic studies of high-pressure/low-temperature rocks can be used to determine the timing and rates of burial and exhumation in subduction zones by dating different stages of the pressure–temperature history. In this study, we present new in situ UV laser ablation 40Ar/39Ar phengite ages from a suite of lawsonite blueschist- and...
Design and testing of a mesocosm-scale habitat for culturing the endangered Devils Hole Pupfish
Olin Feuerbacher, Scott A. Bonar, Paul J. Barrett
2016, North American Journal of Aquaculture (78) 259-269
aptive propagation of desert spring fishes, whether for conservation or research, is often difficult, given the unique and often challenging environments these fish utilize in nature. High temperatures, low dissolved oxygen, minimal water flow, and highly variable lighting are some conditions a researcher might need to recreate to simulate their...
