The effect of adjusting model inputs to achieve mass balance on time-dynamic simulations in a food-web model of Lake Huron
Brian J. Langseth, Michael L. Jones, Stephen C. Riley
2014, Ecological Modelling (273) 44-54
Ecopath with Ecosim (EwE) is a widely used modeling tool in fishery research and management. Ecopath requires a mass-balanced snapshot of a food web at a particular point in time, which Ecosim then uses to simulate changes in biomass over time. Initial inputs to Ecopath, including estimates for biomasses, production...
Identifying objectives and alternative actions to frame a decision problem.
Michael C. Runge, Terry Walshe
2014, Book chapter
In this chapter, we discuss the role of objectives and alternative actions in framing a natural resource management decision problem, with particular attention to thresholds. We outline a number of considerations in developing objectives and measurable attributes, including when utility thresholds may be needed to express the decision-makers’ values.We also...
Active tensor magnetic gradiometer system final report for Project MM–1514
David V. Smith, Jeffrey D. Phillips, S. Raymond Hutton
2014, Open-File Report 2013-1228
An interactive computer simulation program, based on physical models of system sensors, platform geometry, Earth environment, and spheroidal magnetically-permeable targets, was developed to generate synthetic magnetic field data from a conceptual tensor magnetic gradiometer system equipped with an active primary field generator. The system sensors emulate the prototype tensor magnetic...
The transport of nonindigenous microorganisms into caves by human visitation: a case study at Carlsbad Caverns National Park
Dale W. Griffin, Michael A. Gray, Michael B. Lyles, Diana E. Northup
2014, Geomicrobiology Journal (31) 175-185
A series of atmospheric investigations was conducted in Carlsbad Cavern to determine if human visitation is a possible cause for the contamination of the cave system with non-indigenous microorganisms. In 2004, site-specific culture-based data demonstrated that Staphylococcus spp. colony-forming units (CFUs) were the most prevalent members of the atmospheric community...
Geochemistry of groundwater in the Beaver and Camas Creek drainage basins, eastern Idaho
Gordon W. Rattray, Michael L. Ginsbach
2014, Scientific Investigations Report 2013-5226
The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Energy, is studying the fate and transport of waste solutes in the eastern Snake River Plain (ESRP) aquifer at the Idaho National Laboratory (INL) in eastern Idaho. This effort requires an understanding of the natural and anthropogenic geochemistry...
The 3D Elevation Program: summary for New York
William J. Carswell Jr.
2014, Fact Sheet 2014-3006
Elevation data are essential to a broad range of applications, including forest resources management, wildlife and habitat management, national security, recreation, and many others. For the State of New York, elevation data are critical for coastal zone management, natural resources conservation, agriculture and precision farming, flood risk management, infrastructure and...
The 3D Elevation Program: summary for Maryland
William J. Carswell Jr.
2014, Fact Sheet 2014-3005
Elevation data are essential to a broad range of applications, including forest resources management, wildlife and habitat management, national security, recreation, and many others. For the State of Maryland, elevation data are critical for agriculture and precision farming, natural resources conservation such as the Chesapeake Bay and its watershed, flood...
Polar bears exhibit genome-wide signatures of bioenergetic adaptation to life in the Arctic environment
Andreanna J. Welch, Oscar C. Bedoya-Reina, Lorenzo Carretero-Paulet, Webb Miller, Karyn D. Rode, Charlotte Lindqvist
2014, Genome Biology and Evolution (6) 433-450
Polar bears (Ursus maritimus) face extremely cold temperatures and periods of fasting, which might result in more severe energetic challenges than those experienced by their sister species, the brown bear (U. arctos). We have examined the mitochondrial and nuclear genomes of polar and brown bears to investigate if polar bears...
Market forces and technological substitutes cause fluctuations in the value of bat pest-control services for cotton
Laura López-Hoffman, Ruscena Wiederholt, Chris Sansone, Kenneth J. Bagstad, Paul M. Cryan, James E. Diffendorfer, Joshua Goldstein, Kelsie LaSharr, John Loomis, Gary McCracken, Rodrigo A. Medellin, Amy Russell, Darius J. Semmens
2014, PLoS ONE (2)
Critics of the market-based, ecosystem services approach to biodiversity conservation worry that volatile market conditions and technological substitutes will diminish the value of ecosystem services and obviate the “economic benefits” arguments for conservation. To explore the effects of market forces and substitutes on service values, we assessed how the value...
Comparisons of genetic diversity in captive versus wild populations of the federally endangered Quino checkerspot butterfly (Euphydryas editha quino Behr; Lepidoptera: Nymphalidae)
Mark P. Miller, Gordon F. Pratt, Thomas D. Mullins, Susan M. Haig
2014, Proceedings of the Entomological Society of Washington (116) 80-90
Captive populations can play a significant role in threatened and endangered species management. An important consideration when developing and managing captive populations, however, is the maintenance of genetic diversity to ensure that adequate variation exists to avoid the negative consequences of inbreeding. In this investigation, we compared genetic diversity patterns...
Arkansas StreamStats: a U.S. Geological Survey web map application for basin characteristics and streamflow statistics
Aaron L. Pugh
2014, Fact Sheet 2013-3041
The U.S. Geological Survey (USGS) provides streamflow and other related information needed by water-resource managers responsible for protecting people and property from floods, planning and managing water-resource activities, and protecting water quality. Streamflow statistics provided by the USGS, such as the 1-percent annual exceedance probability (100-year flood) and the 7-day...
Geologic framework for the national assessment of carbon dioxide storage resources: Greater Green River Basin, Wyoming, Colorado, and Utah, and Wyoming-Idaho-Utah Thrust Belt
Marc L. Buursink, Ernie R. Slucher, Sean T. Brennan, Colin A. Doolan, Ronald M. Drake II, Matthew D. Merrill, Peter D. Warwick, Madalyn S. Blondes, P.A. Freeman, Steven M. Cahan, Christina A. DeVera, Celeste D. Lohr
2014, Open-File Report 2012-1024-E
The 2007 Energy Independence and Security Act (Public Law 110–140) directs the U.S. Geological Survey (USGS) to conduct a national assessment of potential geologic storage resources for carbon dioxide (CO2). The methodology used by the USGS for the national CO2 assessment follows up on previous USGS work. The methodology is...
Reconstructing disturbances and their biogeochemical consequences over multiple timescales
Kendra K. McLauchlan, Philip E. Higuera, Daniel G. Gavin, Steven S. Perakis, Michelle C. Mack, Heather Alexander, John Battles, Franco Biondi, Brian Buma, Daniele Colombaroli, Sara K. Enders, Daniel R. Engstrom, Feng Sheng Hu, Jennifer R. Marlon, John Marshall, Matt McGlone, Jesse L. Morris, Lucas E. Nave, Bryan Shuman, Erica A.H. Smithwick, Dunia H. Urrego, David A. Wardle, Christopher J. Williams, Joseph J. Williams
2014, BioScience (64) 105-116
Ongoing changes in disturbance regimes are predicted to cause acute changes in ecosystem structure and function in the coming decades, but many aspects of these predictions are uncertain. A key challenge is to improve the predictability of postdisturbance biogeochemical trajectories at the ecosystem level. Ecosystem ecologists and paleoecologists have generated...
External quality-assurance project report for the National Atmospheric Deposition Program/National Trends Network and Mercury Deposition Network, 2009-2010
Gregory A. Wetherbee, RoseAnn Martin, Mark F. Rhodes, Tanya A. Chesney
2014, Scientific Investigations Report 2013-5147
The U.S. Geological Survey operated six distinct programs to provide external quality-assurance monitoring for the National Atmospheric Deposition Program/National Trends Network (NTN) and Mercury Deposition Network (MDN) during 2009–2010. The field-audit program assessed the effects of onsite exposure, sample handling, and shipping on the chemistry of NTN samples; a system-blank...
Genome complexity in the coelacanth is reflected in its adaptive immune system
Nil Ratan Saha, Tatsuya Ota, Gary W. Litman, John Hansen, Zuly Parra, Ellen Hsu, Francesco Buonocore, Adriana Canapa, Jan-Fang Cheng, Chris T. Amemiya
2014, Journal of Experimental Zoology Part B: Molecular and Developmental Evolution (322) 438-463
We have analyzed the available genome and transcriptome resources from the coelacanth in order to characterize genes involved in adaptive immunity. Two highly distinctive IgW-encoding loci have been identified that exhibit a unique genomic organization, including a multiplicity of tandemly repeated constant region exons. The overall organization of the IgW...
Estimation of potential scour at bridges on local government roads in South Dakota, 2009-12
Ryan F. Thompson, Chelsea M. Wattier, Richard R. Liggett, Ryan A. Truax
2014, Scientific Investigations Report 2013-5233
In 2009, the U.S. Geological Survey and South Dakota Department of Transportation (SDDOT) began a study to estimate potential scour at selected bridges on local government (county, township, and municipal) roads in South Dakota. A rapid scour-estimation method (level-1.5) and a more detailed method (level-2) were used to develop estimates...
Landsat Surface Reflectance Climate Data Records
Water Resources Division, U.S. Geological Survey
2014, Fact Sheet 2013-3117
Landsat Surface Reflectance Climate Data Records (CDRs) are high level Landsat data products that support land surface change studies. Climate Data Records, as defined by the National Research Council, are a time series of measurements with sufficient length, consistency, and continuity to identify climate variability and change. The U.S. Geological...
Water-quality variability and constituent transport and processes in streams of Johnson County, Kansas, using continuous monitoring and regression models, 2003-11
Teresa Rasmussen, Jackline Gatotho
2014, Scientific Investigations Report 2013-5221
The population of Johnson County, Kansas increased by about 24 percent between 2000 and 2012, making it one of the most rapidly developing areas of Kansas. The U.S. Geological Survey, in cooperation with the Johnson County Stormwater Management Program, began a comprehensive study of Johnson County streams in 2002 to...
Evaluation of aerial thermal infrared remote sensing to identify groundwater-discharge zones in the Meduxnekeag River, Houlton, Maine
Charles W. Culbertson, Thomas G. Huntington, James M. Caldwell, Cara O’Donnell
2014, Open-File Report 2013-1168
Residents of the area near Houlton, Maine, have observed seasonal episodic blooms of algae and documented elevated concentrations of fecal-coliform bacteria and inorganic nutrients and low dissolved oxygen concentrations in the Meduxnekeag River. Although point and nonpoint sources of urban and agricultural runoff likely contribute to water-quality impairment, the role...
Marine fog: a review
Darko Koracin, Clive E. Dorman, John M. Lewis, James G. Hudson, Eric M. Wilcox, Alicia A. Torregrosa
2014, Atmospheric Research (143) 142-175
The objective of this review is to discuss physical processes over a wide range of spatial scales that govern the formation, evolution, and dissipation of marine fog. We consider marine fog as the collective combination of fog over the open sea along with coastal sea fog and coastal land fog....
Effects of land use, stream habitat, and water quality on biological communities of wadeable streams in the Illinois River Basin of Arkansas, 2011 and 2012
James C. Petersen, B. G. Justus, Bradley J. Meredith
2014, Scientific Investigations Report 2014-5009
The Illinois River Basin includes an area of diverse land use in northwestern Arkansas. Land-use data collected in 2006 indicate that most of the land in the basin is agricultural. The agricultural land is used primarily for production of poultry and cattle. Eighteen sites were selected from the list of candidate...
Suspended-sediment concentrations, loads, total suspended solids, turbidity, and particle-size fractions for selected rivers in Minnesota, 2007 through 2011
Christopher A. Ellison, Brett E. Savage, Gregory D. Johnson
2014, Scientific Investigations Report 2013-5205
Sediment-laden rivers and streams pose substantial environmental and economic challenges. Excessive sediment transport in rivers causes problems for flood control, soil conservation, irrigation, aquatic health, and navigation, and transports harmful contaminants like organic chemicals and eutrophication-causing nutrients. In Minnesota, more than 5,800 miles of streams are identified as impaired by...
Simulation and validation of larval sucker dispersal and retention through the restored Williamson River Delta and Upper Klamath Lake system, Oregon
Tamara M. Wood, Heather A. Hendrixson, Douglas F. Markle, Charles S. Erdman, Summer M. Burdick, Craig M. Ellsworth
2014, Scientific Investigations Report 2013-5194
A hydrodynamic model with particle tracking was used to create individual-based simulations to describe larval fish dispersal through the restored Williamson River Delta and into Upper Klamath Lake, Oregon. The model was verified by converting particle ages to larval lengths and comparing these lengths to lengths of larvae in net...
National Assessment of Oil and Gas Project: geologic assessment of undiscovered gas hydrate resources on the North Slope, Alaska
Timothy S. USGS AK Gas Hydrate Assessment Team: Collett, Warren F. Agena, Myung Woong Lee, Kristen A. Lewis, Margarita V. Zyrianova, Kenneth J. Bird, Ronald R. Charpentier, Troy A. Cook, David W. Houseknecht, Timothy R. Klett, Richard M. Pollastro
2014, Data Series 69-CC
Scientists with the U.S. Geological Survey have completed the first assessment of the undiscovered, technically recoverable gas hydrate resources beneath the North Slope of Alaska. This assessment indicates the existence of technically recoverable gas hydrate resources—that is, resources that can be discovered, developed, and produced using current technology. The approach used...
Variables that affect agricultural chemicals in groundwater in Nebraska
James A. Tindall, Abraham Chen
2014, Water, Air, & Soil Pollution (255)
Agricultural chemicals from nonpoint sources in groundwater are present in the major provinces of the High Plains aquifer in Nebraska. Nitrate and triazine-herbicide concentrations in groundwater were assessed to establish preliminary relations between these constituents and selected hydrogeologic, climatic, and land-use variables. Also, macropore flow paths were measured in an attempt to delineate their contribution to non-point source...