A step decrease in sediment concentration in a highly modified tidal river delta following the 1983 El Niño floods
Erin L. Hestir, David H. Schoellhamer, Tara Morgan-King, Susan L. Ustin
Patrick L. Barnard, Bruce E. Jaffe, David H. Schoellhamer, editor(s)
2013, Marine Geology (345) 304-313
Anthropogenic activities in watersheds can have profound effects on sediment transport through river systems to estuaries. Disturbance in a watershed combined with alterations to the hydro-climatologic regime may result in changes to the sediment flux, and exacerbate the impacts of extreme events (such as large-magnitude floods) on sediment transport. In...
A non-destructive method for dating human remains
Warren K. Lail, David Sammeth, Shannon Mahan, Jason Nevins
2013, Advances in Archaeological Practice: A Journal of the Society for American Archaeology (1) 91-103
The skeletal remains of several Native Americans were recovered in an eroded state from a creek bank in northeastern New Mexico. Subsequently stored in a nearby museum, the remains became lost for almost 36 years. In a recent effort to repatriate the remains, it was necessary to fit them into...
Heavy mineral analysis for assessing the provenance of sandy sediment in the San Francisco Bay Coastal System
Florence L. Wong, Donald L. Woodrow, Mary McGann
Patrick L. Barnard, Bruce E. Jaffe, David H. Schoellhamer, editor(s)
2013, Marine Geology (345) 170-180
Heavy or high-specific gravity minerals make up a small but diagnostic component of sediment that is well suited for determining the provenance and distribution of sediment transported through estuarine and coastal systems worldwide. By this means, we see that surficial sand-sized sediment in the San Francisco Bay Coastal System comes...
Biodiversity in a changing climate: a synthesis of current and projected trends in the US
Michelle D. Staudinger, Shawn L. Carter, Molly S. Cross, Natalie S. Dubois, J. Emmett Duffy, Carolyn Enquist, Roger Griffis, Jessica J. Hellmann, Joshua J. Lawler, John O’Leary, Scott A. Morrison, Lesley Sneddon, Bruce A. Stein, Laura M. Thompson, Woody Turner
2013, Frontiers in Ecology and the Environment (11) 465-473
This paper provides a synthesis of the recent literature describing how global biodiversity is being affected by climate change and is projected to respond in the future. Current studies reinforce earlier findings of major climate-change-related impacts on biological systems and document new, more subtle after-effects. For example, many species are...
Petroleum fingerprinting with organic markers
Frances D. Hostettler, T.D. Lorenson, Barbara A. Bekins
2013, Environmental Forensics (14) 262-277
Petroleum fingerprinting is an invaluable tool in forensic geochemistry. This article summarizes applications of fingerprinting in several oil spills and natural oil seepages that we have studied during the last 25 years. It shows how each unique chemical fingerprint can be used to correlate or differentiate oils. Fingerprints can provide...
Characterization of gas hydrate reservoirs by integration of core and log data in the Ulleung Basin, East Sea
J.-J. Bahk, G.-Y. Kim, J.-H. Chun, J.-H. Kim, J.Y. Lee, B.-J. Ryu, J.-H. Lee, B.-K. Son, Timothy S. Collett
2013, Marine and Petroleum Geology (47) 30-42
Examinations of core and well-log data from the Second Ulleung Basin Gas Hydrate Drilling Expedition (UBGH2) drill sites suggest that Sites UBGH2-2_2 and UBGH2-6 have relatively good gas hydrate reservoir quality in terms of individual and total cumulative thicknesses of gas-hydrate-bearing sand (HYBS) beds. In both of the sites, core...
Distribution of biologic, anthropogenic, and volcanic constituents as a proxy for sediment transport in the San Francisco Bay Coastal System
Mary McGann, Li H. Erikson, Elmira Wan, Charles L. Powell II, Rosalie F. Maddocks
Patrick L. Barnard, Bruce E. Jaffe, David H. Schoellhamer, editor(s)
2013, Marine Geology (345) 113-142
Although conventional sediment parameters (mean grain size, sorting, and skewness) and provenance have typically been used to infer sediment transport pathways, most freshwater, brackish, and marine environments are also characterized by abundant sediment constituents of biological, and possibly anthropogenic and volcanic, origin that can provide additional insight into local sedimentary...
The added complications of climate change: Understanding and managing biodiversity and ecosystems
Amanda Staudt, Allison K. Leidner, Jennifer Howard, Kate A. Brauman, Jeffrey S. Dukes, Lara J. Hansen, Craig P. Paukert, John L. Sabo, Luis A. Solorzano
2013, Frontiers in Ecology and the Environment (11) 494-501
Ecosystems around the world are already threatened by land-use and land-cover change, extraction of natural resources, biological disturbances, and pollution. These environmental stressors have been the primary source of ecosystem degradation to date, and climate change is now exacerbating some of their effects. Ecosystems already under stress are likely to...
Sediment transport in the San Francisco Bay Coastal System: An overview
Patrick L. Barnard, David H. Schoellhamer, Bruce E. Jaffe, Lester J. McKee
Patrick L. Barnard, Bruce E. Jaffe, David H. Schoellhamer, editor(s)
2013, Marine Geology (345) 3-17
The papers in this special issue feature state-of-the-art approaches to understanding the physical processes related to sediment transport and geomorphology of complex coastal-estuarine systems. Here we focus on the San Francisco Bay Coastal System, extending from the lower San Joaquin-Sacramento Delta, through the Bay, and along the adjacent outer Pacific...
Prolonged magmatic activity on Mars inferred from the detection of felsic rocks
James J. Wray, Sarah T. Hansen, Josef Dufek, Gregg A. Swayze, Scott L. Murchie, Frank P. Seelos, John R. Skok, Rossman P. Irwin III, Mark S. Ghiorso
2013, Nature Geoscience (6) 1013-1017
Rocks dominated by the silicate minerals quartz and feldspar are abundant in Earth’s upper continental crust. Yet felsic rocks have not been widely identified on Mars, a planet that seems to lack plate tectonics and the associated magmatic processes that can produce evolved siliceous melts on Earth. If Mars once...
Characteristics and interpretation of fracture-filled gas hydrate: an example from the Ulleung Basin, East Sea of Korea
Myung Woong Lee, Timothy S. Collett
2013, Marine and Petroleum Geology (47) 168-181
Through the use of 2-D and 3-D seismic data, a total of thirteen sites were selected and drilled in the East Sea of Korea in 2010. A suite of logging-while-drilling (LWD) logs was acquired at each site. LWD logs from the UBGH2-3A well indicate significant gas hydrate in clay-bearing sediments...
Efficacy of hand-broadcast application of baits containing 0.005% diphacinone in reducing rat populations in Hawaiian forests
David Foote, Gerald D. Lindsey, Charlotte F. Perry, Eric Spurr
2013, Report, Hawaii Cooperative Studies Technical Report
Introduced black rats (Rattus rattus), Polynesian rats (R. exulans/i>), and Norway rats (R. norvegicus) impact insular bird, plant, and invertebrate populations worldwide. We investigated the efficacy of hand-broadcast application of Ramik® Green containing 0.005% diphacinone for rodent control in paired 4-ha treatment and non-treatment plots in both wet and mesic...
Evidence for a receiver bias underlying female preference for a male mating pheromone in sea lamprey
Tyler J. Buchinger, Huiyong Wang, Weiming Li, Nicholas S. Johnson
2013, Proceedings of the Royal Society B (280)
Receiver bias models suggest that a male sexual signal became exaggerated to match a pre-existing sensory, perceptual or cognitive disposition of the female. Accordingly, these models predict that females of related taxa possessing the ancestral state of signalling evolved preference for the male trait in a non-sexual context. We postulated...
Resilience to stress and disturbance, and resistance to Bromus tectorum L. invasion in cold desert shrublands of western North America
Jeanne C. Chambers, Bethany A. Bradley, Cynthia S. Brown, Carla D'Antonio, Matthew J. Germino, James B. Grace, Stuart P. Hardegree, Richard F. Miller, David A. Pyke
2013, Ecosystems (17) 360-375
Alien grass invasions in arid and semi-arid ecosystems are resulting in grass–fire cycles and ecosystem-level transformations that severely diminish ecosystem services. Our capacity to address the rapid and complex changes occurring in these ecosystems can be enhanced by developing an understanding of the environmental factors and ecosystem attributes that determine...
Measuring suspended sediment
J. R. Gray, M. N. Landers
2013, Book chapter, Comprehensive water quality and purification
Suspended sediment in streams and rivers can be measured using traditional instruments and techniques and (or) surrogate technologies. The former, as described herein, consists primarily of both manually deployed isokinetic samplers and their deployment protocols developed by the Federal Interagency Sedimentation Project. They are used on all continents other than...
The North American Breeding Bird Survey 1966–2011: Summary analysis and species accounts
John R. Sauer, William A. Link, Jane E. Fallon, Keith L. Pardieck, David J. Ziolkowski
2013, North American Fauna (79) 1-32
The North American Breeding Bird Survey is a roadside, count-based survey conducted by volunteer observers. Begun in 1966, it now is a primary source of information on spatial and temporal patterns of population change for North American birds. We analyze population change for states, provinces, Bird Conservation Regions, and the...
A 600-ka Arctic sea-ice record from Mendeleev Ridge based on ostracodes
Thomas M. Cronin, L.V. Polyak, D. Reed, E. S. Kandiano, R. E. Marzen, E. A. Council
2013, Quaternary Science Reviews (79) 157-167
Arctic paleoceanography and sea-ice history were reconstructed from epipelagic and benthic ostracodes from a sediment core (HLY0503-06JPC, 800 m water depth) located on the Mendeleev Ridge, Western Arctic Ocean. The calcareous microfaunal record (ostracodes and foraminifers) covers several glacial/interglacial cycles back to estimated Marine Isotope Stage 13 (MIS 13, ∼500 ka) with...
A hierarchical nest survival model integrating incomplete temporally varying covariates
Sarah J. Converse, J. Andrew Royle, Peter H. Adler, Richard P. Urbanek, Jeb A. Barzan
2013, Ecology and Evolution (3) 4439-4447
Nest success is a critical determinant of the dynamics of avian populations, and nest survival modeling has played a key role in advancing avian ecology and management. Beginning with the development of daily nest survival models, and proceeding through subsequent extensions, the capacity for modeling the effects of hypothesized factors...
Selecting among competing models of electro-optic, infrared camera system range performance
Jonathan M. Nichols, James E. Hines, James D. Nichols
2013, Optical Engineering (52)
Range performance is often the key requirement around which electro-optical and infrared camera systems are designed. This work presents an objective framework for evaluating competing range performance models. Model selection based on the Akaike’s Information Criterion (AIC) is presented for the type of data collected during a typical human observer...
Simulated tsunami inundation for a range of Cascadia megathrust earthquake scenarios at Bandon, Oregon, USA
Robert C. Witter, Yinglong J. Zhang, Kelin Wang, George R. Priest, Chris Goldfinger, Laura Stimely, John T. English, Paul A. Ferro
2013, Geosphere (9) 1783-1803
Characterizations of tsunami hazards along the Cascadia subduction zone hinge on uncertainties in megathrust rupture models used for simulating tsunami inundation. To explore these uncertainties, we constructed 15 megathrust earthquake scenarios using rupture models that supply the initial conditions for tsunami simulations at Bandon, Oregon. Tsunami inundation varies with the...
Sediment transport patterns in the San Francisco Bay Coastal System from cross-validation of bedform asymmetry and modeled residual flux
Patrick L. Barnard, Li H. Erikson, Edwin P.L. Elias, Peter Dartnell
Patrick L. Barnard, Bruce E. Jaffe, David H. Schoellhamer, editor(s)
2013, Marine Geology (345) 72-95
The morphology of ~ 45,000 bedforms from 13 multibeam bathymetry surveys was used as a proxy for identifying net bedload sediment transport directions and pathways throughout the San Francisco Bay estuary and adjacent outer coast. The spatially-averaged shape asymmetry of the bedforms reveals distinct pathways of ebb and flood transport....
Climate change and watershed mercury export: a multiple projection and model analysis
Heather E. Golden, Christopher D. Knightes, Paul Conrads, Toby D. Feaster, Gary M. Davis, Stephen T. Benedict, Paul M. Bradley
2013, Environmental Toxicology and Chemistry (32) 2165-2174
Future shifts in climatic conditions may impact watershed mercury (Hg) dynamics and transport. An ensemble of watershed models was applied in the present study to simulate and evaluate the responses of hydrological and total Hg (THg) fluxes from the landscape to the watershed outlet and in-stream THg concentrations to contrasting...
Woody debris volume depletion through decay: implications for biomass and carbon accounting
Shawn Fraver, Amy M. Milo, John B. Bradford, Anthony W. D’Amato, Laura Kenefic, Brian J. Palik, Christopher W. Woodall, John Brissette
2013, Ecosystems (16) 1262-1272
Woody debris decay rates have recently received much attention because of the need to quantify temporal changes in forest carbon stocks. Published decay rates, available for many species, are commonly used to characterize deadwood biomass and carbon depletion. However, decay rates are often derived from reductions in wood density through...
Human-induced stream channel abandonment/capture and filling of floodplain channels within the Atchafalaya River Basin, Louisiana
Daniel E. Kroes, Thomas F. Kraemer
2013, Geomorphology (201) 148-156
The Atchafalaya River Basin is a distributary system of the Mississippi River containing the largest riparian area in the lower Mississippi River Valley and the largest remaining forested bottomland in North America. Reductions in the area of open water in the Atchafalaya have been occurring over the last 100 years,...
Seasonal variations in suspended-sediment dynamics in the tidal reach of an estuarine tributary
Maureen A. Downing-Kunz, David H. Schoellhamer
Patrick L. Barnard, Bruce E. Jaffe, David H. Schoellhamer, editor(s)
2013, Marine Geology (345) 314-326
Quantifying sediment supply from estuarine tributaries is an important component of developing a sediment budget, and common techniques for estimating supply are based on gages located above tidal influence. However, tidal interactions near tributary mouths can affect the magnitude and direction of sediment supply to the open waters of the...
