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Publication Extents

Not all publications have extents, not all extents are completely accurate
Genome-wide genetic diversity may help identify fine-scale genetic structure among lake whitefish spawning groups in Lake Erie
Peter T. Euclide, Joseph Schmitt, Richard Kraus, Andy Cook, Jim Markham
2022, Journal of Great Lakes Research (48) 1298-1305
In Lake Erie, lake whitefish Coregonus clupeaformis supported lucrative fisheries before populations were decimated by overfishing and water quality degradation. In recent years, there has been a renewed interest in lake whitefish and management of the fishery they support. Lake whitefish spawn on several reefs...
Measurements of Geologic Characteristics and Geophysical Properties of Sediments From the New England Mud Patch
Jason Chaytor, Meagan Ballard, Brian J. Buczkowski, John A. Goff, Kevin M. Lee, Allen Reed, Allyson Anne Boggess
2022, IEEE Journal of Ocean Engineering (47) 503-530
The characterization of physical, geological, and geophysical properties of sediments within the New England Mud Patch (NEMP) was undertaken to provide a physical basis for acoustic inversions associated with the SeaBed Characterization EXperiment 2017 (SBCEX17). Using a suite of 89 sediment cores (piston/trigger, gravity [acoustic], and...
Using transcriptomics to predict and visualize disease status in bighorn sheep (Ovis canadensis)
Lizabeth Bowen, Kezia R. Manlove, Annette Roug, Shannon C. Waters-Dynes, Nate LaHue, Peregrine Wolff
2022, Conservation Physiology (10)
Increasing risk of pathogen spillover coupled with overall declines in wildlife population abundance in the Anthropocene make infectious disease a relevant concern for species conservation worldwide. While emerging molecular tools could improve our diagnostic capabilities and give insight into mechanisms underlying wildlife disease risk, they have rarely been applied...
Spatial dynamic N-mixture models with interspecific interactions
Qing Zhao, Angela K Fuller, J. Andrew Royle
2022, Methods in Ecology and Evolution (13) 2209-2221
Interspecific interactions and movement are key factors that drive the coexistence of metapopulations in heterogenous landscapes. Yet, it is challenging to understand these factors because separating movement from local population processes relied on capture-based data that are difficult to collect. Recent development of spatial dynamic N-mixture models (SDNMs) made...
Geophysical extent of the Wyoming Province, western USA: Insights into ancient subduction and craton stability
Paul A. Bedrosian, Carol D. Frost
2022, Geological Society of America Bulletin (135) 725-742
A new 3-D resistivity model, estimated from inversion of magnetotelluric data, images crustal and upper-mantle structure of the Wyoming Province and adjacent areas. The Archean province is imaged as a coherent resistive domain, in sharp contrast to active tectonic domains of the western U.S. Prominent high-conductivity belts...
Standard operating protocol for mark and recapture monitoring of Brook Floater in streams
Sean Sterrett, Allison H. Roy, Peter Hazelton, Beth Swartz, Ethan Nedeau, Jason Carmignani, Ayla Skorupa
2022, Cooperator Science Series CSS-142-2022
The Brook Floater (Alasmidonta varicosa) is a small (<100 mm) freshwater mussel (Family: Unionidae) found in streams of the eastern United States (U.S.) (Nedeau 2008). While there has been limited effort to document the status of Brook Floater across its range, there is evidence of Brook Floater range contraction and...
Rapid implementation of high-frequency wastewater surveillance of SARS-CoV-2
Meghan M. Holst, John Person, Wiley Jennings, Rory M. Welsh, Michael J. Focazio, Paul M. Bradley, W. Bane Schill, Amy E. Kirby, Zachary A. Marsh
2022, ES&T: Water (2) 2201-2210
There have been over 507 million cases of COVID-19, the disease caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), resulting in 6 million deaths globally. Wastewater surveillance has emerged as a valuable tool in understanding SARS-CoV-2 burden in communities. The...
DevelNet: Earthquake detection on Develocorder films with deep learning: Application to the rangely earthquake control experiment
Kaiwen Wang, William L Ellsworth, Gregory C. Beroza, Weiqiang Zhu, Justin Rubinstein
2022, Bulletin of the Seismological Society of America (93) 2515-2528
There exists over a century of instrumental seismic data; however, most seismograms recorded before the 1980s are only available in analog form. Although analog seismograms are of great value, they are underutilized due to the difficulties of making quantitative measurements on the original...
What’s It worth? Estimating the potential value of early warnings of cyanobacterial harmful algal blooms for managing freshwater reservoirs in Kansas, United States
Emily Pindilli, Keith A. Loftin
2022, Frontiers in Enviornmental Science (10)
Cyanobacterial blooms are an issue drawing increasing concern in freshwater lakes and reservoirs in the United States due to the real and sometimes perceived harms they can cause through cyanotoxin production or other effects. These types of blooms are often referred to as cyanobacterial harmful algal blooms (cyanoHABs)....
U.S. Geological Survey response to Hurricane Maria flooding in Puerto Rico and characterization of peak streamflows observed September 20–22, 2017
Julieta M. Gómez-Fragoso, Mark Smith, Marilyn Santiago
2022, Scientific Investigations Report 2022-5040
Hurricane Maria struck the island of Puerto Rico on September 20, 2017, as a Category 4 storm. The hurricane traversed the island from southeast to northwest and produced recorded 48-hour rainfall totals of up to 30.01 inches. Estimates of the human death toll range from 2,975 to 4,645, possibly more.The...
Hydrogeology and simulation of groundwater flow in the Lucerne Valley groundwater basin, California
Christina Stamos-Pfeiffer, Joshua Larsen, Robert E. Powell, Jonathan C. Matti, Peter Martin
2022, Scientific Investigations Report 2022-5048
The Lucerne Valley is in the southwestern part of the Mojave Desert and is about 75 miles northeast of Los Angeles, California. The Lucerne Valley groundwater basin encompasses about 230 square miles and is separated from the Upper Mojave Valley groundwater basin by splays of the Helendale Fault. Since its...
Potential effects of sea level rise on nearshore habitat availability for surf smelt (Hypomesus pretiosus) and eelgrass (Zostera marina), Puget Sound, Washington
Collin D. Smith, Theresa L. Liedtke
2022, Open-File Report 2022-1054
In this study we examine the potential effects of three predicted sea level rise (SLR) scenarios on the nearshore eelgrass (Zostera marina L.) and surf smelt (Hypomesus pretiosus) spawning habitats along a beach on Bainbridge Island, Washington. Baseline bathymetric, geomorphological, and biological surveys were conducted to determine the existing...
Medium spatial resolution mapping of global land cover and land cover change across multiple decades from Landsat
Mark A. Friedl, Curtis E. Woodcock, Pontus Olofsson, Zhe Zhu, Thomas R. Loveland, Radost Stanimirova, Paulo Arevalo, Eric L. Bullock, Kai-Ting Hu, Yingtong Zhang, Konrad Turlej, Katelyn Tarrio, McAvoy Kristina, Noel Gorelick, Jonathan A. Wang, Christopher P. Barber, Carlos Souza Jr.
2022, Frontiers in Remote Sensing (3)
Land cover maps are essential for characterizing the biophysical properties of the Earth’s land areas. Because land cover information synthesizes a rich array of information related to both the ecological condition of land areas and their exploitation by humans, they are widely used for basic and applied research that requires...
Evaluating the efficacy of aerial infrared surveys to detect artificial polar bear dens
Susannah P. Woodruff, Justin J Blank, Sheyna S Wisdom, Ryan H. Wilson, George M. Durner, Todd C. Atwood, Craig J Perham, Christina HM Pohl
2022, Wildlife Society Bulletin (46)
The need to balance economic development with impacts to Arctic wildlife has been a prominent subject since petroleum exploration began on the North Slope of Alaska, USA, in the late 1950s. The North Slope region includes polar bears (Ursus maritimus) of the southern Beaufort Sea subpopulation,...
Potential for critical mineral deposits in Maine, USA
John F. Slack, F.M. Beck, D.C. Bradley, M. M. Felch, Robert G. Marvinney, A.T.H. Whittaker
2022, Atlantic Geoscience (58) 155-191
An analysis of the potential for deposits of critical minerals and elements in Maine presented here includes data and discussions for antimony, beryllium, cesium, chromium, cobalt, graphite, lithium, manganese, niobium, platinum group elements, rhenium, rare earth elements, tin, tantalum, tellurium, titanium, uranium, vanadium, tungsten, and zirconium. Deposits are divided into...
Comparison of water year 2021 streamflow to historical data at selected sites in the Snake River Basin, Wyoming
Ruth M. Law, James Campbell, Jerrod D. Wheeler, Cheryl A. Eddy-Miller
2022, Fact Sheet 2022-3043
The headwaters of the Snake River are in the mountains of northwestern Wyoming on lands primarily administered by the National Park Service and the Bridger-Teton National Forest. Streamflow from the Snake River Basin has been measured at some sites for more than 100 years. Water from this drainage basin is...
Statistical consideration of nonrandom treatment applications reveal region-wide benefits of widespread post-fire restoration action
Allison B. Simler-Williamson, Matthew J. Germino
2022, Nature Communications (13)
Accurate predictions of ecological restoration outcomes are needed across the increasingly large landscapes requiring treatment following disturbances. However, observational studies often fail to account for nonrandom treatment application, which can result in invalid inference. Examining a spatiotemporally extensive management treatment-- post-fire seeding of declining sagebrush shrubs across the semiarid U.S....
A numerical study of geomorphic and oceanographic controls on wave-driven runup on fringing reefs with shore-normal channels
Curt D. Storlazzi, Annouk Rey, Ap van Dongeren
2022, Journal of Marine Science and Engineering (10)
Many populated, tropical coastlines fronted by fringing coral reefs are exposed to wave-driven marine flooding that is exacerbated by sea-level rise. Most fringing coral reef are not alongshore uniform, but bisected by shore-normal channels; however, little is known about the influence of such channels on alongshore variations on runup and...
Hybridization decreases native cutthroat trout reproductive fitness
William C. Rosenthal, John M. Fennell, Elizabeth G. Mandeville, Jason C. Burckhardt, Annika W. Walters, Catherine E. Wagner
2022, Molecular Ecology (31) 4224-4241
Examining natural selection in wild populations is challenging, but crucial to understanding many ecological and evolutionary processes. Additionally, in hybridizing populations, natural selection may be an important determinant of the eventual outcome of hybridization. We characterized several components of relative fitness in hybridizing populations of Yellowstone cutthroat trout and rainbow...
Prairie grouse and wind energy: The state of the science and implications for risk assessment
John D. Lloyd, Cameron L. Aldridge, Taber D. Allison, Chad W. LeBeau, Lance B. McNew, Virginia L. Winder
2022, Wildlife Society Bulletin (46)
How to shape the anticipated build-out of industrial-scale renewable energy in a way that minimizes risk to wildlife remains contentious. This challenge is well-illustrated in the grasslands and shrub-steppe of North America. Here, several endemic species of grouse are the focus of intensive, long-term conservation action by a host of...
Speciation with gene flow in a narrow endemic West Virginia cave salamander (Gyrinophilus subterraneus)
Evan H. Campbell Grant, Kevin P. Mulder, Adrianne B. Brand, Douglas B. Chambers, Addison H. Wynn, Grace Capshaw, Matthew L. Niemiller, John G. Phillips, Jeremy F. Jacobs, Shawn R. Kuchta, Rayna C. Bell
2022, Conservation Genetics (23) 727-744
Due to their limited geographic distributions and specialized ecologies, cave species are often highly endemic and can be especially vulnerable to habitat degradation within and surrounding the cave systems they inhabit. We investigated the evolutionary history of the West Virginia Spring Salamander (Gyrinophilus subterraneus), estimated the population trend from historic...
Prioritizing habitats based on abundance and distribution of molting waterfowl in the Teshekpuk Lake Special Area of the National Petroleum Reserve, Alaska
Paul L. Flint, Vijay P. Patil, Bradley Shults, Sarah J. Thompson
2022, Global Ecology and Conservation (38)
The National Petroleum Reserve in Alaska (NPR-A) encompasses more than 9.5 million hectares of federally managed land on the Arctic Coastal Plain of northern Alaska, where it supports a diversity of wildlife, including millions of migratory birds. Within the NPR-A, Teshekpuk Lake and the surrounding area provide important habitat for...
Progression of infection and detection of Pseudoloma neurophilia in zebrafish Danio rerio Hamilton by PCR and histology
Corbin J. Schuster, Taylor Kreul, Colleen E. Al-Samarrie, James T. Peterson, Justin L. Sanders, Michael L. Kent
2022, Journal of Fish Diseases (45) 1463-1475
Pseudoloma neurophilia is a critical threat to the zebrafish (Danio rerio) model, as it is the most common infectious agent found in research facilities. In this study, our objectives were two-fold: (1) compare the application of diagnostic tools for P. neurophilia and (2) track the progression of infection using PCR and histology. The...
Integrating monitoring and optimization modeling to inform flow decisions for Chinook salmon smolts
Patti J. Wohner, Adam Duarte, John Wikert, Brad Cavallo, Steven C. Zeug, James T. Peterson
2022, Ecological Modelling (471)
Monitoring is usually among the first actions taken to help inform recovery planning for declining species, but these data are rarely used formally to inform conservation decision making. For example, Central Valley Chinook salmon were once abundant, but anthropogenic activities have led to widespread habitat loss and degradation resulting in...