Compartment-based hydrodynamics and water quality modeling of a northern Everglades wetland, Florida, USA
Hongqing Wang, Ehab A. Meselhe, Michael G. Waldon, Matthew C. Harwell, Chunfang Chen
2012, Ecological Modelling (247) 273-285
The last remaining large remnant of softwater wetlands in the US Florida Everglades lies within the Arthur R. Marshall Loxahatchee National Wildlife Refuge. However, Refuge water quality today is impacted by pumped stormwater inflows to the eutrophic and mineral-enriched 100-km canal, which circumscribes the wetland. Optimal management is a challenge...
Wildlife contact analysis: Emerging methods, questions, and challenges
Paul C. Cross, Tyler G. Creech, Michael R. Ebinger, Dennis M. Heisey, Kathryn M. Irvine, Scott Creel
2012, Behavioral Ecology and Sociobiology (66) 1437-1447
Recent technological advances, such as proximity loggers, allow researchers to collect complete interaction histories, day and night, among sampled individuals over several months to years. Social network analyses are an obvious approach to analyzing interaction data because of their flexibility for fitting many different social structures as well as the...
Inoculation of bats with European Geomyces destructans supports the novel pathogen hypothesis for the origin of white-nose syndrome
Lisa Warnecke, James M. Turner, Trent K. Bollinger, Jeffrey M. Lorch, Vikram Misra, Paul M. Cryan, Gudrun Wibbelt, David S. Blehert, Craig K. R. Willis
2012, Proceedings of the National Academy of Sciences (109) 6999-7003
White-nose syndrome (WNS) is an emerging disease of hibernating bats associated with cutaneous infection by the fungus Geomyces destructans (Gd), and responsible for devastating declines of bat populations in eastern North America. Affected bats appear emaciated and one hypothesis is that they spend too much time out of torpor during hibernation, depleting...
Generation of a U.S. national urban land use product
James A. Falcone, Collin G. Homer
2012, Photogrammetric Engineering and Remote Sensing (78) 1057-1068
Characterization of urban land uses is essential for many applications. However, differentiating among thematically-detailed urban land uses (residential, commercial, industrial, institutional, recreational, etc.) over broad areas is challenging, in part because image-based solutions are not ideal for establishing the contextual basis for identifying economic function and use. At present no...
Coupling at Mauna Loa and Kīlauea by stress transfer in an asthenospheric melt layer
Helge M. Gonnermann, James H. Foster, Michael Poland, Cecily J. Wolfe, Benjamin A. Brooks, Asta Miklius
2012, Nature Geoscience (5) 826-829
The eruptive activity at the neighbouring Hawaiian volcanoes, Kīlauea and Mauna Loa, is thought to be linked despite both having separate lithospheric magmatic plumbing systems. Over the past century, activity at the two volcanoes has been anti-correlated, which could reflect a competition for the same magma supply. Yet, during the...
Bird populations on the Island of Tinian: persistence despite wholesale loss of native forests
Richard J. Camp, Frederick A. Amidon, Ann P. Marshall, Thane K. Pratt
2012, Pacific Science (66) 283-298
Bird habitat on the island of Tinian, Mariana Islands, has been substantially altered, and only around 5% of the island has native forest today. The modern bird fauna is likely to be a subset of the original avifauna where only species tolerant to native forest loss and human disturbance have...
The genome of Chelonid herpesvirus 5 harbors atypical genes
Mathias Ackermann, Maxim Koriabine, Fabienne Hartmann-Fritsch, Pieter J. de Jong, Teresa D. Lewis, Nelli Schetle, Thierry M. Work, Julie Dagenais, George H. Balazs, Jo-Ann C. Leong
2012, PLoS ONE (7)
The Chelonid fibropapilloma-associated herpesvirus (CFPHV; ChHV5) is believed to be the causative agent of fibropapillomatosis (FP), a neoplastic disease of marine turtles. While clinical signs and pathology of FP are well known, research on ChHV5 has been impeded because no cell culture system for its propagation exists. We have cloned...
Extinction rates in North American freshwater fishes, 1900-2010
Noel M. Burkhead
2012, BioScience (62) 798-808
Widespread evidence shows that the modern rates of extinction in many plants and animals exceed background rates in the fossil record. In the present article, I investigate this issue with regard to North American freshwater fishes. From 1898 to 2006, 57 taxa became extinct, and three distinct populations were extirpated...
Influence of space use on fitness and the reintroduction success of the Laysan teal
M.H. Reynolds, Jeff S. Hatfield, L.P. Laniawe, M.S. Vekasy, J.L. Klavitter, P. Berkowitz, L.H. Crampton, J. R. Walters
2012, Animal Conservation (15) 305-317
Translocation is an important tool for wildlife conservation and biodiversity restoration, but an inefficient one because of the unpredictability of success. Predictors of success such as habitat quality of the release site and number of individuals released have been identified, but the dynamics of successful translocations remain poorly understood. In...
Revealing the appetite of the marine aquarium fish trade: the volume and biodiversity of fish imported into the United States
Andrew L. Rhyne, Michael F. Tlusty, Pamela J. Schofield, Les Kaufman, James A. Morris Jr., Andrew W. Bruckner
2012, PLoS ONE (7)
The aquarium trade and other wildlife consumers are at a crossroads forced by threats from global climate change and other anthropogenic stressors that have weakened coastal ecosystems. While the wildlife trade may put additional stress on coral reefs, it brings income into impoverished parts of the world and may stimulate...
Plant allocation of carbon to defense as a function of herbivory, light and nutrient availability
Donald L. DeAngelis, Shu Ju, Rongsong Liu, John P. Bryant, Stephen A. Gourley
2012, Theoretical Ecology (5) 445-456
We use modeling to determine the optimal relative plant carbon allocations between foliage, fine roots, anti-herbivore defense, and reproduction to maximize reproductive output. The model treats these plant components and the herbivore compartment as variables. Herbivory is assumed to be purely folivory. Key external factors include nutrient availability, degree of...
Health assessment and seroepidemiologic survey of potential pathogens in wild Antillean manatees (Trichechus manatus manatus)
Kathryn Sulzner, Christine Kreuder Johnson, Robert K. Bonde, Nicole Auil Gomez, James Powell, Klaus Nielsen, M. Page Luttrell, A.D.M.E. Osterhaus, A. Alonso Aguirre
2012, PLoS ONE (7)
The Antillean manatee (Trichechus manatus manatus), a subspecies of the West Indian manatee, inhabits fresh, brackish, and warm coastal waters distributed along the eastern border of Central America, the northern coast of South America, and throughout the Wider Caribbean Region. Threatened primarily by human encroachment, poaching, and habitat degradation, Antillean...
A two-phase sampling design for increasing detections of rare species in occupancy surveys
Krishna Pacifici, Robert M. Dorazio, Michael J. Dorazio
2012, Methods in Ecology and Evolution (3) 721-730
1. Occupancy estimation is a commonly used tool in ecological studies owing to the ease at which data can be collected and the large spatial extent that can be covered. One major obstacle to using an occupancy-based approach is the complications associated with designing and implementing an efficient survey. These...
Towards a theory of ecotone resilience: coastal vegetation on a salinity gradient
Jiang Jiang, Daozhou Gao, Donald L. DeAngelis
2012, Theoretical Population Biology (82) 29-37
Ecotones represent locations where vegetation change is likely to occur as a result of climate and other environmental changes. Using a model of an ecotone vulnerable to such future changes, we estimated the resilience of the ecotone to disturbances. The specific ecotone is that between two different vegetation types, salinity-tolerant...
Quantification of water-level variability effect on plant species populations using paleoecological and hydrological time series data
Edwin A. Roehl Jr., Paul Conrads, Christopher Bernhardt
2012, Conference Paper, Proceedings of the 2012 South Carolina Water Resources Conference
Soil cores provide valuable data on historical changes in vegetation and hydrologic conditions. Empirical models were developed to quantify the effect of meteorological and hydrologic forcing on plant species distributions over a 110-year period in Water Conservation Area 1 (WCA1) in the Florida Everglades, also known as the Arthur R....
Digging behaviors of radio-tagged black-footed ferrets near Meeteetse, Wyoming, 1981-1984
Dean E. Biggins, Louis R. Hanebury, Kathleen A. Fagerstone
2012, Western North American Naturalist (72) 148-157
Intensive radio-tracking during August–December enabled us to collect detailed information on digging behaviors of a small sample of black-footed ferrets (Mustela nigripes) occupying colonies of white-tailed prairie dogs (Cynomys leucurus). A sample of 33 prairie dogs, also radio-tagged, progressively ceased aboveground activity during late summer and fall, presumably as they...
Temperature-dependent growth of Geomyces destructans, the fungus that causes bat white-nose syndrome
Michelle L. Verant, Justin G. Boyles, William Waldrep Jr., Gudrun Wibbelt, David S. Blehert
2012, PLoS ONE (7)
White-nose syndrome (WNS) is an emergent disease estimated to have killed over five million North American bats. Caused by the psychrophilic fungus Geomyces destructans, WNS specifically affects bats during hibernation. We describe temperature-dependent growth performance and morphology for six independent isolates of G. destructans from North America and Europe. Thermal performance curves for...
Arthropod prey for riparian associated birds in headwater forests of the Oregon Coast Range
Joan C. Hagar, Judith Li, Janel Sobota, Stephanie Jenkins
2012, Forest Ecology and Management (285) 213-226
Headwater riparian areas occupy a large proportion of the land base in Pacific Northwest forests, and thus are ecologically and economically important. Although a primary goal of management along small headwater streams is the protection of aquatic resources, streamside habitat also is important for many terrestrial wildlife species. However, mechanisms...
Effect of developmental stage of unfed fry on survival and growth of steelhead released in a stream and hatchery ponds (Study sites: Dworshak Hatchery and North Fork Palouse River; Stock: Dworshak hatchery; Year class: 1996)
Stephen P. Rubin, Reginald R. Reisenbichler, Lisa A. Wetzel, Karl D. Stenberg
Stephen P. Rubin, Reginald R. Reisenbichler, Lisa A. Wetzel, Michael C. Hayes, editor(s)
2012, Book chapter, Genetic differences in growth, migration, and survival between hatchery and wild steelhead and Chinook salmon: Final report. Performance period: June 1991 to December 2005
We tested whether differences in developmental stage of unfed fry at release affected subsequent survival and growth of steelhead Oncorhynchus mykiss in a stream and hatchery ponds. Differences in development were created by artificially spawning hatchery steelhead from the Clearwater River, Idaho, and incubating their progeny at three different temperatures...
Effect of incubation temperature on post-embryonic survival and growth of steelhead in a natural stream and a hatchery (Study sites: Dworshak Hatchery and North Fork Palouse River; Stocks: Dworshak hatchery; Year classes: 1994 and 1995)
Stephen P. Rubin, Reginald R. Reisenbichler, Lisa A. Wetzel, Karl D. Stenberg, Bruce M. Baker
Stephen P. Rubin, Reginald R. Reisenbichler, Lisa A. Wetzel, Michael C. Hayes, editor(s)
2012, Book chapter, Genetic differences in growth, migration, and survival between hatchery and wild steelhead and Chinook salmon: Final report. Performance period: June 1991 to December 2005
We tested whether varying incubation temperatures to match development between embryos from different spawning dates affected survival and growth of unfed steelhead Oncorhynchus mykiss fry released in a stream and in hatchery ponds. Hatchery steelhead returning to the Clearwater River, Idaho were artificially spawned on two dates separated by...
Genetic differences between hatchery and wild steelhead for survival, growth, dispersal, and male maturation in a natural stream (Study site: Twenty-Mile Creek; Stocks: Dworshak hatchery and Selway River wild; Year classes: 1994 and 1995)
Stephen P. Rubin, Reginald R. Reisenbichler, Jay E. Hensleigh, Lisa A. Wetzel, Bruce M. Baker, Frank Leonetti Frank, Karl D. Stenberg, Stacey L. Slatton
Stephen P. Rubin, Reginald R. Reisenbichler, Lisa A. Wetzel, Michael C. Hayes, editor(s)
2012, Report, Genetic differences in growth, migration, and survival between hatchery and wild steelhead and Chinook salmon: Final report. Performance period: June 1991 to December 2005
This study was initiated in the early 1990s to provide managers with data comparing genetic fitness for natural rearing, as measured by survival of juveniles in freshwater, between steelhead Oncorhynchus mykiss from Dworshak National Fish Hatchery and wild steelhead from the Clearwater River, Idaho. We artificially spawned hatchery steelhead and...
Genetic differences between hatchery and wild steelhead for growth and survival in the hatchery and seaward migration after release (Study sites: Dworshak Hatchery and Clearwater Hatchery; Stocks: Dworshak hatchery and Selway River wild; Year classes: 1994 and 1995)
Stephen P. Rubin, Reginald R. Reisenbichler, Jay E. Hensleigh, Lisa A. Wetzel, Bruce M. Baker
Stephen P. Rubin, Reginald R. Reisenbichler, Lisa A. Wetzel, Michael C. Hayes, editor(s)
2012, Book chapter, Genetic differences in growth, migration, and survival between hatchery and wild steelhead and Chinook salmon: Final report. Performance period: June 1991 to December 2005
Various studies suggest that sea ranching of anadromous salmonids can result in domestication (increased fitness in the hatchery program) and a loss of fitness for natural production; however, the mechanism has not been characterized adequately. We artificially spawned hatchery and wild steelhead Oncorhynchus mykiss from the Clearwater River, Idaho, reared...
Differences in survival and growth in hatchery and stream environments, and in maturation of residuls in a stream, between progeny of hatchery and wild steelhead (Study sites: Brushy Fork Creek and Dworshak Hatchery; Stocks:Dworshak hatchery and Fish Creek wild; Year classes: 1992 and 1993)
Stephen P. Rubin, Reginald R. Reisenbichler, Lisa Wetzel, Jay E. Hensleigh, Frank Leonetti Frank, Bruce M. Baker, Stacey L. Slatton, Karl D. Stenberg
Stephen P. Rubin, Reginald R. Reisenbichler, Lisa A. Wetzel, Michael C. Hayes, editor(s)
2012, Book chapter, Genetic differences in growth, migration, and survival between hatchery and wild steelhead and Chinook salmon: Final report. Performance period: June 1991 to December 2005
Freshwater survival in hatchery and natural rearing environments was compared between progeny of hatchery (H) and wild (W) steelhead Oncorhynchus mykiss from the Clearwater River drainage in Idaho. Adults from Dworshak National Fish Hatchery and wild adults from Fish Creek fish were artificially spawned, and their progeny were genetically marked...
Changes in sources and storage in a karst aquifer during a transition from drought to wet conditions
C.I. Wong, B.J. Mahler, M. Musgrove, J.L. Banner
2012, Journal of Hydrology (468-469) 159-172
Understanding the sources and processes that control groundwater compositions and the timing and magnitude of groundwater vulnerability to potential surface-water contamination under varying meteorologic conditions is critical to informing groundwater protection policies and practices. This is especially true in karst terrains, where infiltrating surface water can rapidly affect groundwater quality....
Inferring local competition intensity from patch size distributions: a test using biological soil crusts
Matthew A. Bowker, Fernando T. Maestre
2012, Oikos (121) 1914-1922
Dryland vegetation is inherently patchy. This patchiness goes on to impact ecology, hydrology, and biogeochemistry. Recently, researchers have proposed that dryland vegetation patch sizes follow a power law which is due to local plant facilitation. It is unknown what patch size distribution prevails when competition predominates over facilitation, or if...