Trophic connections in Lake Superior Part I: the offshore fish community
A.E. Gamble, T.R. Hrabik, J.D. Stockwell, D.L. Yule
2011, Journal of Great Lakes Research (37) 541-549
Detailed diet linkages within the offshore (> 80 m bathymetric depth) food web of Lake Superior are currently not well identified. We used analyses of fish stomach contents to create an empirically based food web model of the Lake Superior offshore fish community. Stomachs were collected seasonally (spring, summer, and...
Repeatable source, site, and path effects on the standard deviation for empirical ground-motion prediction models
P.-S. Lin, B. Chiou, N. Abrahamson, M. Walling, C.-T. Lee, C.-T. Cheng
2011, Bulletin of the Seismological Society of America (101) 2281-2295
In this study, we quantify the reduction in the standard deviation for empirical ground-motion prediction models by removing ergodic assumption.We partition the modeling error (residual) into five components, three of which represent the repeatable source-location-specific, site-specific, and path-specific deviations from the population mean. A variance estimation procedure of these error...
A computer program for flow-log analysis of single holes (FLASH)
F. D. Day-Lewis, C. D. Johnson, Frederick L. Paillet, K. J. Halford
2011, Ground Water (49) 926-931
A new computer program, FLASH (Flow-Log Analysis of Single Holes), is presented for the analysis of borehole vertical flow logs. The code is based on an analytical solution for steady-state multilayer radial flow to a borehole. The code includes options for (1) discrete fractures and (2) multilayer aquifers. Given vertical...
Multiplexed microsatellite recovery using massively parallel sequencing
T.N. Jennings, B.J. Knaus, T.D. Mullins, S. M. Haig, R.C. Cronn
2011, Molecular Ecology Resources (11) 1060-1067
Conservation and management of natural populations requires accurate and inexpensive genotyping methods. Traditional microsatellite, or simple sequence repeat (SSR), marker analysis remains a popular genotyping method because of the comparatively low cost of marker development, ease of analysis and high power of genotype discrimination. With the availability of massively parallel...
How landscape dynamics link individual- to population-level movement patterns: A multispecies comparison of ungulate relocation data
T. Mueller, K.A. Olson, G. Dressler, P. Leimgruber, T.K. Fuller, C. Nicolson, A.J. Novaro, M.J. Bolgeri, David W. Wattles, S. DeStefano, J.M. Calabrese, W.F. Fagan
2011, Global Ecology and Biogeography (20) 683-694
Aim To demonstrate how the interrelations of individual movements form large‐scale population‐level movement patterns and how these patterns are associated with the underlying landscape dynamics by comparing ungulate movements across species.Locations Arctic tundra in Alaska and Canada, temperate forests in Massachusetts, Patagonian Steppes in Argentina, Eastern Steppes in Mongolia.Methods We used relocation data...
Adaptive resource management and the value of information
B. Kenneth Williams, M.J. Eaton, D.R. Breininger
2011, Ecological Modelling (222) 3429-3436
The value of information is a general and broadly applicable concept that has been used for several decades to aid in making decisions in the face of uncertainty. Yet there are relatively few examples of its use in ecology and natural resources management, and almost none that are framed in...
Multivariate analyses with end-member mixing to characterize groundwater flow: Wind Cave and associated aquifers
Andrew J. Long, J.F. Valder
2011, Journal of Hydrology (409) 315-327
Principal component analysis (PCA) applied to hydrochemical data has been used with end-member mixing to characterize groundwater flow to a limited extent, but aspects of this approach are unresolved. Previous similar approaches typically have assumed that the extreme-value samples identified by PCA represent end members. The method presented herein is...
Environmental conditions constrain the distribution and diversity of archaeal merA in Yellowstone National Park, Wyoming, U.S.A.
Y. Wang, E. Boyd, S. Crane, P. Lu-Irving, David P. Krabbenhoft, S. King, J. Dighton, G. Geesey, T. Barkay
2011, Microbial Ecology (62) 739-752
The distribution and phylogeny of extant protein-encoding genes recovered from geochemically diverse environments can provide insight into the physical and chemical parameters that led to the origin and which constrained the evolution of a functional process. Mercuric reductase (MerA) plays an integral role in mercury (Hg) biogeochemistry by catalyzing the...
Landscape features influence postrelease predation on endangered black-footed ferrets
S.A. Poessel, S.W. Breck, E. Biggins, T.M. Livieri, K.R. Crooks, L. Angeloni
2011, Journal of Mammalogy (92) 732-741
Predation can be a critical factor influencing recovery of endangered species. In most recovery efforts lethal and nonlethal influences of predators are not sufficiently understood to allow prediction of predation risk, despite its importance. We investigated whether landscape features could be used to model predation risk from coyotes (Canis latrans)...
The GeoClaw software for depth-averaged flows with adaptive refinement
M.J. Berger, D.L. George, R.J. LeVeque, Kyle T. Mandli
2011, Advances in Water Resources (34) 1195-1206
Many geophysical flow or wave propagation problems can be modeled with two-dimensional depth-averaged equations, of which the shallow water equations are the simplest example. We describe the GeoClaw software that has been designed to solve problems of this nature, consisting of open source Fortran programs together with Python tools for...
Gender-based differences in Florida apple snail (Pomacea paludosa) movements
P. L. Valentine-Darby, P.C. Darby, H.F. Percival
2011, Malacologia (54) 109-118
Gastropod movements have been studied in the context of habitat selection, finding food and mates, and avoiding predation. Many of these studies were conducted in the laboratory, where constraints on spatial scale influence behavior. We conducted a field study of Florida apple snail (Pomacea paludosa) movements using telemetry. We hypothesized...
High-frequency Born synthetic seismograms based on coupled normal modes
F. Pollitz
2011, Geophysical Journal International (187) 1420-1442
High-frequency and full waveform synthetic seismograms on a 3-D laterally heterogeneous earth model are simulated using the theory of coupled normal modes. The set of coupled integral equations that describe the 3-D response are simplified into a set of uncoupled integral equations by using the Born approximation to calculate scattered...
Quantifying the hydrological responses to climate change in an intact forested small watershed in Southern China
G. Zhou, X. Wei, Y. Wu, Y. Huang, J. Yan, Dongxiao Zhang, Q. Zhang, J. Liu, Z. Meng, C. Wang, G. Chu, S. Liu, X. Tang, Xiuying Liu
2011, Global Change Biology (17) 3736-3746
Responses of hydrological processes to climate change are key components in the Intergovernmental Panel for Climate Change (IPCC) assessment. Understanding these responses is critical for developing appropriate mitigation and adaptation strategies for sustainable water resources management and protection of public safety. However, these responses are not well understood and little...
Integration of Palmer Drought Severity Index and remote sensing data to simulate wetland water surface from 1910 to 2009 in Cottonwood Lake area, North Dakota
Shengli Huang, Devendra Dahal, Claudia Young, Gyanesh Chander, Shuguang Liu
2011, Remote Sensing of Environment (115) 3377-3389
Spatiotemporal variations of wetland water in the Prairie Pothole Region are controlled by many factors; two of them are temperature and precipitation that form the basis of the Palmer Drought Severity Index (PDSI). Taking the 196 km2 Cottonwood Lake area in North Dakota as our pilot study site, we integrated PDSI, Landsat...
Response of surface processes to climatic change in the dunefields and Loess Plateau of North China during the late Quaternary
H. Lu, J.A. Mason, T. Stevens, Y. Zhou, S. Yi, X. Miao
2011, Earth Surface Processes and Landforms (36) 1590-1603
This paper draws on recent optically stimulated luminescence (OSL) dating to evaluate the long‐held assumption that dust accumulation rates in the Loess Plateau and the extent of active aeolian sand in the dunefields to the north have varied together over time, because both are controlled by the strength of the...
Titan's cloud seasonal activity from winter to spring with Cassini/VIMS
S. Rodriguez, S. Le Mouelic, P. Rannou, Christophe Sotin, R. H. Brown, J. W. Barnes, C.A. Griffith, J. Burgalat, K. H. Baines, B. J. Buratti, R. N. Clark, P. D. Nicholson
2011, Icarus (216) 89-110
Since Saturn orbital insertion in July 2004, the Cassini orbiter has been observing Titan throughout most of the northern winter season (October 2002–August 2009) and the beginning of spring, allowing a detailed monitoring of Titan’s cloud coverage at high spatial resolution with close flybys on a monthly basis. This...
A working environment for digital planetary data processing and mapping using ISIS and GRASS GIS
A. Frigeri, T. Hare, M. Neteler, A. Coradini, C. Federico, R. Orosei
2011, Conference Paper, Planetary and Space Science
Since the beginning of planetary exploration, mapping has been fundamental to summarize observations returned by scientific missions. Sensor-based mapping has been used to highlight specific features from the planetary surfaces by means of processing. Interpretative mapping makes use of instrumental observations to produce thematic maps that summarize observations of actual...
Surface-water nutrient conditions and sources in the United States Pacific Northwest
D.R. Wise, H.M. Johnson
2011, Journal of the American Water Resources Association (47) 1110-1135
The SPAtially Referenced Regressions On Watershed attributes (SPARROW) model was used to perform an assessment of surface-water nutrient conditions and to identify important nutrient sources in watersheds of the Pacific Northwest region of the United States (U.S.) for the year 2002. Our models included variables representing nutrient sources as well...
Parasite transmission in social interacting hosts: Monogenean epidemics in guppies
M.B. Johnson, K. D. Lafferty, Oosterhout C. van, J. Cable
2011, PLoS ONE (6)
BackgroundInfection incidence increases with the average number of contacts between susceptible and infected individuals. Contact rates are normally assumed to increase linearly with host density. However, social species seek out each other at low density and saturate their contact rates at high densities. Although predicting epidemic behaviour...
Homogenization of large-scale movement models in ecology
M.J. Garlick, J. A. Powell, M.B. Hooten, L.R. McFarlane
2011, Bulletin of Mathematical Biology (73) 2088-2108
A difficulty in using diffusion models to predict large scale animal population dispersal is that individuals move differently based on local information (as opposed to gradients) in differing habitat types. This can be accommodated by using ecological diffusion. However, real environments are often spatially complex, limiting application of a direct...
A multi-agency nutrient dataset used to estimate loads, improve monitoring design, and calibrate regional nutrient SPARROW models
D. A. Saad, G. E. Schwarz, Dale M. Robertson, N.L. Booth
2011, Journal of the American Water Resources Association (47) 933-949
Stream‐loading information was compiled from federal, state, and local agencies, and selected universities as part of an effort to develop regional SPAtially Referenced Regressions On Watershed attributes (SPARROW) models to help describe the distribution, sources, and transport of nutrients in streams throughout much of the United States. After screening, 2,739...
Potential shifts in dominant forest cover in interior Alaska driven by variations in fire severity
K. Barrett, A. David McGuire, E.E. Hoy, E.S. Kasischke
2011, Ecological Applications (21) 2380-2396
Large fire years in which >1% of the landscape burns are becoming more frequent in the Alaskan (USA) interior, with four large fire years in the past 10 years, and 79 000 km2 (17% of the region) burned since 2000. We modeled fire severity conditions for the entire area burned in large...
Sex effect on polychlorinated biphenyl concentrations in fish: a synthesis
C.P. Madenjian
2011, Fish and Fisheries (12) 451-460
Polychlorinated biphenyls (PCBs) accumulate in fish primarily via food intake, and therefore, PCBs serve as a chemical tracer for food consumption. Sex differences in PCB concentrations of fish have been attributed to the following three mechanisms: (i) females losing a substantial portion of their PCB body burden during spawning and...
Coral skeletal carbon isotopes (δ13C and Δ14C) record the delivery of terrestrial carbon to the coastal waters of Puerto Rico
R.P. Moyer, A.G. Grottoli
2011, Coral Reefs (30) 791-802
Tropical small mountainous rivers deliver a poorly quantified, but potentially significant, amount of carbon to the world’s oceans. However, few historical records of land–ocean carbon transfer exist for any region on Earth. Corals have the potential to provide such records, because they draw on dissolved inorganic carbon (DIC) for calcification....
Pressure waves in a supersaturated bubbly magma
I. Kurzon, V. Lyakhovsky, O. Navon, B. Chouet
2011, Geophysical Journal International (187) 421-438
We study the interaction of acoustic pressure waves with an expanding bubbly magma. The expansion of magma is the result of bubble growth during or following magma decompression and leads to two competing processes that affect pressure waves. On the one hand, growth in vesicularity leads to increased damping and...