Fine-scale population genetic structure in Alaskan Pacific halibut (Hippoglossus stenolepis)
Jennifer L. Nielsen, Sara L. Graziano, Andrew C. Seitz
2010, Conservation Genetics (11) 999-1012
Pacific halibut collected in the Aleutian Islands, Bering Sea and Gulf of Alaska were used to test the hypothesis of genetic panmixia for this species in Alaskan marine waters. Nine microsatellite loci and sequence data from the mitochondrial (mtDNA) control region were analyzed. Eighteen unique mtDNA haplotypes were found with...
Elodontoma in captive southern red-backed voles (Myodes gapperi)
Julia Rodriguez-Ramos Fernandez, Marie E. Pinkerton, Dennis M. Heisey, Randi Drees, Jay Schneider, Lacey Stickney, Erik K. Hofmeister, David Sanchez-Migallon Guzman
2010, Journal of Zoo and Wildlife Medicine (41) 555-561
Five southern red-backed voles (Myodes gapperi) of the first generation of a wild-caught breeding colony were presented with lesions at the maxillary incisors consistent with elodontoma. The affected animals had a history of chronic weight loss, were >16 months of age, and were siblings. Radiographs of the head showed multiglobular...
Population structure and relatedness among female Northern Pintails in three California wintering regions
Joseph P. Fleskes, Ada C. Fowler, Michael L. Casazza, John M. Eadie
2010, Waterbirds (33) 1-9
Female Northern Pintails (Anas acuta) were sampled in California's three main Central Valley wintering regions (Sacramento Valley, Suisun Marsh, San Joaquin Valley) during September–October before most regional movements occur and microsatellite and mitochondrial DNA were analyzed to examine population structure and relatedness. Despite reportedly high rates of early-fall pairing and...
Phylogeography of declining relict and lowland leopard frogs in the desert Southwest of North America
V. Olah-Hemmings, J.R. Jaeger, M.J. Sredl, Martin A. Schlaepfer, R.D. Jennings, C.A. Drost, D.F. Bradford, B.R. Riddle
2010, Journal of Zoology (280) 343-354
We investigated the phylogeography of the closely related relict leopard frog Rana onca (=Lithobates onca) and lowland leopard frog Rana yavapaiensis (=Lithobates yavapaiensis) – two declining anurans from the warm‐desert regions of south‐western North America. We used sequence data from mitochondrial DNA (mtDNA) to assess 276 individuals representing 30 sites from across current distributions....
Plant population and habitat characteristics of the endemic Sonoran Desert cactus Peniocereus striatus in Organ Pipe Cactus National Monument, Arizona
Greta Anderson, Sue Rutman, Seth M. Munson
2010, Madroño (57) 220-228
Peniocereus striatus (Brandegee) Buxb. (Cactaceae) is an endemic Sonoran Desert cactus that reaches its northern range limit in southwestern Arizona. One U.S. population occupies a small area of Organ Pipe Cactus National Monument near the U.S./Mexico international boundary, which has been monitored since 1939. An extensive survey conducted in 2002,...
Pleistocene carbonate stratigraphy of South Florida: Evidence for high-frequency sea-level cyclicity
Todd D. Hickey, Albert C. Hine, Eugene A. Shinn, Sarah E. Kruse, Richard Z. Poore
2010, Journal of Coastal Research (26) 605-614
Pleistocene carbonates of south Florida and islands of the Florida Keys are currently divided into five marine sequences designated, from oldest to youngest, the Q1–Q5 units. The units include a mosaic of freshwater and shallow marine deposits that accumulated on the Florida platform during high sea-level stands. The...
Physiological response of wild dugongs (Dugong dugon) to out-of-water sampling for health assessment
Janet M. Lanyon, Helen L. Sneath, Trevor Long, Robert K. Bonde
2010, Aquatic Mammals (36) 46-58
The dugong (Dugong dugon) is a vulnerable marine mammal with large populations living in urban Queensland waters. A mark-recapture program for wild dugongs has been ongoing in southern Queensland since 2001. This program has involved capture and in-water sampling of more than 700 dugongs where animals have been held at...
Polyphyly of Campylorhamphus, and description of a new genus for C. pucherani (Dendrocolaptinae)
Santiago Claramunt, Elizabeth P. Derryberry, R. Terry Chesser, Alexandre Eleixo, Robb T. Brumfield
2010, The Auk (127) 430-439
We investigated the phylogenetic relationships of Campylorhamphus pucherani using DNA sequences from three mitochondrial genes and a nuclear intron, as well as 84 morphological characters from the skeleton, the integument, and the musculature. The molecular phylogeny indicated that C. pucherani is not part of Campylorhamphus; instead, it is the sister...
Perspectives: Gene Expression in Fisheries Management
Jennifer L. Nielsen, Scott A. Pavey
2010, Current Zoology (56) 157-174
Functional genes and gene expression have been connected to physiological traits linked to effective production and broodstock selection in aquaculture, selective implications of commercial fish harvest, and adaptive changes reflected in non-commercial fish populations subject to human disturbance and climate change. Gene mapping using single nucleotide polymorphisms (SNPs) to identify...
Persistence of highly pathogenic avian influenza H5N1 virus defined by agro-ecological niche
Lenny Hogerwerf, Rob G. Wallace, Daniela Ottaviani, Jan Slingenbergh, Diann Prosser, Luc Bergmann, Marius Gilbert
2010, EcoHealth (7) 213-225
The highly pathogenic avian influenza (HPAI) H5N1 virus has spread across Eurasia and into Africa. Its persistence in a number of countries continues to disrupt poultry production, impairs smallholder livelihoods, and raises the risk a genotype adapted to human-to-human transmission may emerge. While previous studies identified domestic duck reservoirs as...
The inverse niche model for food webs with parasites
Christopher P. Warren, Mercedes Pascual, Kevin D. Lafferty, Armand M. Kuris
2010, Theoretical Ecology (3) 285-294
Although parasites represent an important component of ecosystems, few field and theoretical studies have addressed the structure of parasites in food webs. We evaluate the structure of parasitic links in an extensive salt marsh food web, with a new model distinguishing parasitic links from non-parasitic links among free-living species. The...
Parametric study of the physical properties of hydrate-bearing sand, silt, and clay sediments: 1. Electromagnetic properties
J.Y. Lee, J.C. Santamarina, C. Ruppel
2010, Journal of Geophysical Research (115)
The marked decrease in bulk electrical conductivity of sediments in the presence of gas hydrates has been used to interpret borehole electrical resistivity logs and, to a lesser extent, the results of controlled source electromagnetic surveys to constrain the spatial distribution and predicted concentration of gas hydrate in natural settings....
Parametric study of the physical properties of hydrate‐bearing sand, silt, and clay sediments: 2. Small‐strain mechanical properties
J.Y. Lee, F.M. Francisca, J.C. Santamarina, C. Ruppel
2010, Journal of Geophysical Research (115)
The small‐strain mechanical properties (e.g., seismic velocities) of hydrate‐bearing sediments measured under laboratory conditions provide reference values for calibration of logging and seismic exploration results acquired in hydrate‐bearing formations. Instrumented cells were designed for measuring the compressional (P) and shear (S) velocities of sand, silts, and clay with and without...
Pathways for arsenic from sediments to groundwater to streams: Biogeochemical processes in the Inner Coastal Plain, New Jersey, USA
Julia L. Barringer, Adam Mumford, Lily Y. Young, Pamela A. Reilly, Jennifer L. Bonin, Robert Rosman
2010, Water Research (44) 5532-5544
The Cretaceous and Tertiary sediments that underlie the Inner Coastal Plain of New Jersey contain the arsenic-rich mineral glauconite. Streambed sediments in two Inner Coastal Plain streams (Crosswicks and Raccoon Creeks) that traverse these glauconitic deposits are enriched in arsenic (15–25 mg/kg), and groundwater discharging to the streams contains elevated levels...
Changes of freshwater-lens thickness in basaltic island aquifers overlain by thick coastal sediments
Kolja Rotzoll, Delwyn S. Oki, Aly I. El-Kadi
2010, Hydrogeology Journal (18) 1425-1436
Freshwater-lens thickness and long-term changes in freshwater volume in coastal aquifers are commonly assessed through repeated measurement of salinity profiles from monitor wells that penetrate into underlying salt water. In Hawaii, the thickest measured freshwater lens is currently 262 m in dike-free, volcanic-rock aquifers that are overlain by thick coastal...
Patterns of organic contaminants in eggs of an insectivorous, an omnivorous, and a piscivorous bird nesting on the Hudson River, New York, USA
Christine M. Custer, Thomas W. Custer, Paul M. Dummer
2010, Environmental Toxicology and Chemistry (29) 2286-2296
Belted kingfisher (Ceryle alcyon), spotted sandpiper (Actitus macularia), and tree swallow (Tachycineta bicolor) eggs were collected in 2004 from the upper Hudson River, New York, USA. This area is one of the most polychlorinated biphenyl (PCB)‐contaminated locations in North America. Multivariate analyses indicated among species differences in the concentration and...
Pancam and Microscopic Imager observations of dust on the Spirit Rover: Cleaning events, spectral properties, and aggregates
Alicia F. Vaughan, Jeffrey R. Johnson, Kenneth E. Herkenhoff, Robert Sullivan, Geoffrey A. Landis, Walter Goetz, Morten B. Madsen
2010, Mars, The International Journal of Mars Science and Exploration (5) 129-145
This work describes dust deposits on the Spirit Rover over 2000 sols through examination of Pancam and Microscopic Imager observations of specific locations on the rover body, including portions of the solar array, Pancam and Mini-TES calibration targets, and the magnets. This data set reveals the three "cleaning events" experienced...
Occupancy dynamics in a tropical bird community: Unexpectedly high forest use by birds classified as non‐forest species
Viviana Ruiz-Gutierrez, Elise F. Zipkin, Andre A. Dhondt
2010, Journal of Applied Ecology (47) 621-630
1. Worldwide loss of biodiversity necessitates a clear understanding of the factors driving population declines as well as informed predictions about which species and populations are at greatest risk. The biggest threat to the long-term persistence of populations is the reduction and changes in configuration of their natural habitat. 2....
Optimal control of native predators
Julien Martin, Allan F. O’Connell, William L. Kendall, Michael C. Runge, Theodore R. Simons, Arielle H. Waldstein, Shiloh A. Schulte, Sarah J. Converse, Graham W. Smith, Timothy Pinion, Michael Rikard, Elise F. Zipkin
2010, Biological Conservation (143) 1751-1758
We apply decision theory in a structured decision-making framework to evaluate how control of raccoons (Procyon lotor), a native predator, can promote the conservation of a declining population of American Oystercatchers (Haematopus palliatus) on the Outer Banks of North Carolina. Our management objective was to maintain Oystercatcher productivity above a...
Observed and predicted reproduction of Ceriodaphnia dubia exposed to chloride, sulfate, and bicarbonate
Peter J. Lasier, Ian R. Hardin
2010, Environmental Toxicology and Chemistry (29) 347-358
Chronic toxicities of Cl-, SO42-, and HCO3- to Ceriodaphnia dubia were evaluated in low- and moderate-hardness waters using a three-brood reproduction test method. Toxicity tests of anion mixtures were used to determine interaction effects and to produce models predicting C. dubia reproduction. Effluents diluted with low- and moderate-hardness waters were...
North American osprey populations and contaminants: Historic and contemporary perspectives
Charles J. Henny, Robert A. Grove, James L. Kaiser, Branden L. Johnson
2010, Journal of Toxicology and Environmental Health, Part B: Critical Reviews (13) 579-603
Osprey (Pandion haliaetus) populations were adversely affected by DDT and perhaps other contaminants in the United States and elsewhere. Reduced productivity, eggshell thinning, and high DDE concentrations in eggs were the signs associated with declining osprey populations in the 1950s, 1960s, and 1970s. The species was one of the first...
Nutrient fluxes at the landscape level and the R* rule
Shu Ju, Donald L. DeAngelis
2010, Ecological Modelling (221) 141-146
Nutrient cycling in terrestrial ecosystems involves not only the vertical recycling of nutrients at specific locations in space, but also biologically driven horizontal fluxes between different areas of the landscape. This latter process can result in net accumulation of nutrients in some places and net losses in others. We examined...
Nocturnal and diurnal activity of armored suckermouth catfish (Loricariidae: Pterygoplichthys) associated with wintering Florida manatees (Trichechus manatus latirostris)
Leo G. Nico
2010, Neotropical Ichthyology (8) 893-898
Several Pterygoplichthys species, members of the Neotropical catfish family Loricariidae, have been widely introduced outside their native ranges. In this paper, I present observations on the diel activity pattern of non-native Pterygoplichthys, tentatively identified as P. disjunctivus, with respect to their attachment and grazing on endangered Florida manatees, Trichechus manatus latirostris. The study was conducted...
Non-native salmonids affect amphibian occupancy at multiple spatial scales
David S. Pilliod, Blake R. Hossack, Peter F. Bahls, Evelyn L. Bull, Paul Stephen Corn, Grant Hokit, Bryce A. Maxell, James C. Munger, Aimee Wyrick
2010, Diversity and Distributions (16) 959-974
Aim The introduction of non-native species into aquatic environments has been linked with local extinctions and altered distributions of native species. We investigated the effect of non-native salmonids on the occupancy of two native amphibians, the long-toed salamander (Ambystoma macrodactylum) and Columbia spotted frog (Rana luteiventris), across three spatial...
Active Metal and Industrial Mineral Underground Mines in the United States in 2008
2010, Report