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Publication Extents

Not all publications have extents, not all extents are completely accurate
State shifts in the deep Critical Zone drive landscape evolution in volcanic terrains
Leif Karlstrom, Nathaniel Klema, Gordon E. Grant, Carol A. Finn, Pamela L. Sullivan, Sarah Cooley, Alex Simpson, Becky Fasth, Katherine Cashman, Ken Ferrier, Lyndsay B. Ball, Daniele McKay
2025, PNAS (122)
Understanding the near-surface environment where atmospheric and solid earth processes interact, often termed the “Critical Zone,” is important for assessing resources and building resilient societies. Here, we examine a volcanic landscape in the Oregon Cascade Range, an understudied Critical Zone setting that is host to major regional water resources, pervasive...
The influence of pre-existing structures on geothermal springs: Inferences from potential field mapping in Surprise Valley, CA and other sites In the northwestern Great Basin
Jonathan M.G. Glen, Tait E. Earney
2025, Conference Paper, Using the Earth to save the Earth
Surprise Valley, located in the northwestern Great Basin, is an asymmetric extensional basin that marks a major tectonic transition between the relatively un-extended volcanic Modoc Plateau to the west, and the Basin and Range to the east that has undergone 10-15% extension. In addition, it sits just north of...
Geophysical identification of potential groundwater – surface water interactions in the Bonita Peak Mining District, San Juan County, Colorado
Dale D. Werkema, Neil C. Terry, Martin A. Briggs, Elizabeth Rutila, Stephen Dyment
2024, Report
This report includes the results and interpretation of geophysical investigations to aid in the location, identification, and conceptual site model (CSM) development of the near surface groundwater and surface water hydrology of the Upper Cement Creek and California Gulch of the Animas Rivers within the Bonita Peak Mining Districts (BPMD)....
New developments at the Center for Engineering Strong-Motion Data (CESMD)
Lijam Hagos, Hamid Haddadi, Lisa Sue Schleicher, Jamison Haase Steidl, Eric M. Thompson, Heather Crume, M. Dhar, N. Leue
2024, Conference Paper
The Center for Engineering Strong-Motion Data (CESMD), an internationally utilized joint center of the U.S. Geological Survey (USGS) and the California Geological Survey (CGS), provides a single access point for earthquake strong-motion records and station metadata from the CGS California Strong-Motion Instrumentation Program (CSMIP), the USGS National Strong-Motion Project (NSMP),...
Ticks without borders: Microbiome of immature neotropical tick species parasitizing migratory songbirds along northern Gulf of Mexico
Shahid Karim, Theodore J. Zenzal Jr., Lorenza Beati, Raima Sen, Abdulsalam Adegoke, Deepak Kumar, Latoyia P. Downs, Mario Keko, Ashly Nussbaum, Daniel J. Becker, Frank R. Moore
2024, Frontiers in Cellular and Infection Microbiology (14)
Introduction: The long-distance, seasonal migrations of birds make them an effective ecological bridge for the movement of ticks. The introduction of exotic tick species to new geographical regions can cause the emergence of novel tick-borne pathogens. This study examined the prevalence of exotic tick species parasitizing migratory songbirds at stopover sites...
Penguin colony georegistration using camera pose estimation and phototourism
Haoyu Wu, Clare Flynn, Carole Hall, Christian Joseph Che-Castaldo, Dimitris Samaras, Mathew Schwaller, Heather J. Lynch
2024, PLoS ONE (19)
Satellite-based remote sensing and uncrewed aerial imagery play increasingly important roles in the mapping of wildlife populations and wildlife habitat, but the availability of imagery has been limited in remote areas. At the same time, ecotourism is a rapidly growing industry and can yield a vast catalog of photographs that...
Inventorying ponds through novel size-adaptive object mapping using Sentinel-1/2 time series
Denghong Liu, Xioalin Zhu, Meredith Holgerson, Sheel Bansal, Xiangtao Xu
2024, Remote Sensing of Environment (315)
Ponds are an important source of greenhouse gases (GHGs) to the atmosphere, yet evaluating their role in global biogeochemical cycling is currently hampered by limitations in quantifying their global distribution. Existing satellite-derived estimates of lake distributions have difficulty identifying small lakes (5–10 ha) and ponds (<5 ha) due to limitations in satellite...
Streams, springs, and volcanic lakes for volcano monitoring
Steven E. Ingebritsen, Shaul Hurwitz
2024, Scientific Investigations Report 2024-5062-F
IntroductionVolcanic unrest can trigger appreciable change to surface waters such as streams, springs, and volcanic lakes. Magma degassing produces gases and soluble salts that are absorbed into groundwater that feeds streams and lakes. As magma ascends, the amount of heat and degassing will increase, and so will any related geochemical...
Groundwater and surface-water interactions in the Lower Duwamish Waterway, Seattle, Washington
Jackson N. Mitchell, Kathleen E. Conn
2024, Scientific Investigations Report 2024-5046
The U.S. Geological Survey (USGS), in cooperation with the Washington State Department of Ecology (Ecology), conducted a study to describe the current understanding of the regional groundwater system of the lower Duwamish River valley and groundwater and surface-water interactions in the lower Duwamish Waterway. The lower Duwamish Waterway is the...
Coastal Science Navigator companion guide—Discover the U.S. Geological Survey coastal science products you need
Mira Anderberg, Sara Ernst
2024, Circular 1523
The Coastal Science Navigator is an online gateway to a wide variety of U.S. Geological Survey (USGS) coastal change hazards-related information, data, and tools relevant to stakeholders’ scientific and decision-making needs. The products within the Coastal Science Navigator provide data related to past, present, and future threats to our coastlines....
CoastSeg: An accessible and extendable hub for satellite-derived-shoreline (SDS) detection and mapping
Sharon Fitzpatrick, Daniel D. Buscombe, Jonathan A. Warrick, Mark A. Lundine, Kilian Vos
2024, Journal of Open Source Software (9)
CoastSeg is an interactive browser-based program that aims to broaden the adoption of satellite-derived shoreline (SDS) detection and coastal landcover mapping workflows among coastal scientists and coastal resource management practitioners. SDS is a sub-field of coastal sciences that aims to detect and post-process a time-series of shoreline locations from publicly...
The National Ocean Biodiversity Strategy
Gabrielle Canonico, J. Emmett Duffy, Masha Edmonson, Katie Fillingham, Abigail Benson, Kelsey Bisson, Amanda Demopoulos, Beth Hinchey, Katsumi Matsumoto, Chris Meyer, James Price, Elaine Shen, Woody Turner, Mike Weise, Andrea Vander Woude, Lauren Wenzel
2024, Report
President Biden has been clear that the ocean is central to life on Earth. As he has proclaimed, “the ocean powers millions of jobs; feeds and sustains us; and is a rejuvenating source of inspiration, exploration, and recreation.” The Biden-Harris Administration has worked hard to fulfill the President’s goal to...
Climate, food and humans predict communities of mammals in the United States
Roland Kays, Matthew H. Snider, George Hess, Michael V. Cove, Alex Jensen, Hila Shamon, William J. McShea, Brigit Rooney, Maximilian L. Allen, Charles E. Pekins, Christopher C. Wilmers, Mary E. Pendergast, Austin M. Green, Justin Suraci, Matthew S. Leslie, Sophie Nasrallah, Dan Farkas, Mark Jordan, Melissa Grigione, Michael LaScaleia, Miranda L. Davis, Chris Hansen, Josh Millspaugh, Jesse S. Lewis, Michael Havrda, Robert Long, Kathryn R. Remine, Kodi J. Jaspers, Diana J. R. Lafferty, Tru Hubbard, Colin E. Studds, Erika L. Barthelmess, Katherine Andy, Andrea Romero, Brian J. O’Neill, Melissa T.R. Hawkins, Jason V. Lombardi, Maksim Sergeyev, M. Caitlin Fisher-Reid, Michael S. Rentz, Christopher Nagy, Jon D Davenport, Christine C. Rega-Brodsky, Cara L. Appel, Damon B. Lesmeister, Sean T. Giery, Christopher A. Whittier, Jesse M. Alston, Chris Sutherland, Christopher Rota, Thomas Murphy, Thomas E. Lee Jr., Alessio Mortelliti, Dylan L. Bergman, Justin A. Compton, Brian D. Gerber, Jess Burr, Kylie Rezendes, Brett Alexander DeGregorio, Nathaniel H. Wehr, John F. Benson, M. Teague O’Mara, David S. Jachowski, Morgan Gray, Dean E. Beyer Jr., Jerrold L. Belant, Robert V. Horan III, Robert Charles Lonsinger, Kellie M. Kuhn, Steven C. M. Hasstedt, Marketa Zimova, Sophie M. Moore, Daniel J. Herrera, Sarah Fritts, Andrew J. Edelman, Elizabeth A. Flaherty, Tyler R. Petroelje, Sean A. Neiswenter, Derek R. Risch, Fabiola Iannarilli, Marius van der Merwe, Sean P. Maher, Zach J. Farris, Stephen L. Webb, David S. Mason, Marcus A. Lashley, Andrew M. Wilson, John P. Vanek, Samuel R. Wehr, L. Mike Conner, James C. Beasley, Helen L. Bontrager, Carolina Baruzzi, Susan N. Ellis-Felege, Mike D. Proctor, Jan Schipper, Katherine Weiss, Andrea K. Darracq, Evan G. Barr, Peter D. Alexander, Cagan H. Sekercioglu, Daniel A. Bogan, Christopher M. Schalk, Jean E. Fantle-Lepczyk, Christopher A. Lepczyk, Scott LaPoint, Laura S. Whipple, Helen Ivy Rowe, Kayleigh Mullen, Tori Bird, Adam Zorn, LaRoy Brandt, Richard G. Lathrop, Craig McCain, Anthony P. Crupi, James Clark, Arielle Parsons
2024, Diversity and Distributions (30)
AimThe assembly of species into communities and ecoregions is the result of interacting factors that affect plant and animal distribution and abundance at biogeographic scales. Here, we empirically derive ecoregions for mammals to test whether human disturbance has become more important than climate and habitat resources in...
An enhanced and expanded Toolbox for River Velocimetry using Images from Aircraft (TRiVIA)
Carl J. Legleiter, Paul J. Kinzel
2024, River Research and Applications (40) 1602-1616
Detailed, accurate information on flow patterns in river channels can improve understanding of habitat conditions, geomorphic processes, and potential hazards to help inform water management. Data describing flow patterns in river channels can be obtained efficiently via image-based techniques that have become more widely used in recent years as the...
Predicting the odds of chronic wasting disease with Habitat Risk software
W. David Walter, Brenda J. Hanley, Cara E. Them, Corey I. Mitchell, James Kelly, Daniel Grove, Nicholas Hollingshead, Rachel C. Abbott, Krysten L. Schuler
2024, Spatial and Spatio-temporal Epidemiology (49)
Chronic wasting disease (CWD) is a transmissible spongiform encephalopathy that was first detected in captive cervids in Colorado, United States (US) in 1967, but has since spread into free-ranging white-tailed deer (Odocoileus virginianus) across the US and Canada as well as to Scandinavia and South Korea. In some areas, the...
Reservoir evolution, downstream sediment transport, downstream channel change, and synthesis of geomorphic responses of Fall Creek and Middle Fork Willamette River to water years 2012–18 streambed drawdowns at Fall Creek Lake, Oregon
Mackenzie K. Keith, J. Rose Wallick, Liam N. Schenk, Laurel E. Stratton Garvin, Gabriel W. Gordon, Heather M. Bragg
2024, Scientific Investigations Report 2023-5135
Executive SummaryChapter A. IntroductionFall Creek Dam impounds Fall Creek Lake, a 10-kilometer-long reservoir in western Oregon and is operated by the U.S. Army Corps of Engineers (USACE) primarily for flood-risk management (or flood control) in late autumn through early spring months, as well as for water quality, irrigation, recreation, and...
Existing evidence on the effects of climate variability and climate change on ungulates in North America: A systematic map
Kate Malpeli, Sarah C. Endyke, Sarah R. Weiskopf, Laura Thompson, Ciara G. Johnson, Katherine Anne Kurth, Maxfield A. Carlin
2024, Environmental Evidence (13)
BackgroundClimate is an important driver of ungulate life-histories, population dynamics, and migratory behaviors. Climate conditions can directly impact ungulates via changes in the costs of thermoregulation and locomotion, or indirectly, via changes in habitat and forage availability, predation, and species interactions. Many studies have documented the effects of...
Assessing spatial variability of nutrients, phytoplankton, and related water-quality constituents in the California Sacramento–San Joaquin Delta at the landscape scale—2018 high resolution mapping surveys
Brian A. Bergamaschi, Tamara E. C. Kraus, Bryan D. Downing, Elizabeth B. Stumpner, Katy O’Donnell, Jeffrey A. Hansen, Jeniffer Soto Perez, Emily T. Richardson, Angela M. Hansen, Alan Gelber
2024, Scientific Investigations Report 2023-5060
Executive Summary This study examined the abundance and distribution of nutrients and phytoplankton in the tidal aquatic environments of the Sacramento–San Joaquin Delta (Delta) and Suisun Bay, comprising three spatial surveys conducted in May, July, and October of 2018 that used continuous underway high frequency sampling and measurements onboard a...
StreamStats—A quarter century of delivering web-based geospatial and hydrologic information to the public, and lessons learned
Kernell G. Ries III, Peter A. Steeves, Peter M. McCarthy
2024, Circular 1514
StreamStats is a U.S. Geological Survey (USGS) web application that provides streamflow statistics, such as the 1-percent annual exceedance probability peak flow, the mean flow, and the 7-day, 10-year low flow, to the public through a map-based user interface. These statistics are used in many ways, such as in the...
A multi-sensor approach to characterize winter water-level drawdown patterns in lakes
Abhishek Kumar, Allison H. Roy, Konstantinos Andreadis, Xinchen He, Caitlyn Butler
2024, Remote Sensing (16)
Artificial manipulation of lake water levels through practices like winter water-level drawdown (WD) is prevalent across many regions, but the spatiotemporal patterns are not well documented due to limited in situ monitoring. Multi-sensor satellite remote sensing provides an opportunity to map and analyze drawdown frequency and metrics (timing, magnitude, duration)...
Potential use of poultry farms by wild waterfowl in California's Central Valley varies across space, times of day, and species: implications for influenza transmission risk
Claire S. Teitelbaum, Michael L. Casazza, Cory T. Overton, Jeffery D. Sullivan, Elliott Matchett, Fiona McDuie, Austen Lorenz, Joshua T. Ackerman, Susan E.W. De La Cruz, Diann J. Prosser
2024, Ecosphere (2024)
Interactions between wildlife and livestock can lead to cross-species disease transmission, which incurs economic costs and threatens wildlife conservation. Wild waterfowl are natural hosts of avian influenza viruses (AIVs), are often abundant near poultry farms, and have been linked to outbreaks of AIVs in...
Lava flow impacts on the built environment: Insights from a new global dataset
Elinor S. Meredith, Susanna F. Jenkins, Josh L. Hayes, David Lallemant, Natalia I. Deligne, Natalie Teng Rui Xue
2024, Journal of Applied Volcanology (13)
The recent destruction of thousands of homes by lava flows from La Palma volcano, Canary Islands, and Nyiragongo volcano, Democratic Republic of Congo, serves as a reminder of the devastating impact that lava flows can have on communities living in volcanically active regions. Damage to buildings...
Global potential distribution of mangroves: Taking into account salt marsh interactions along latitudinal gradients
Lina Cui, Don DeAngelis, Uta Berger, Minmin Cao, Yaqi Zhang, Xiaomin Zhang, Jiang Jiang
2024, Journal of Environmental Management (351)
Mangrove is one of the most productive and sensitive ecosystems in the world. Due to the complexity and specificity of mangrove habitat, the development of mangrove is regulated by several factors. Species distribution models (SDMs) are effective tools to identify the potential habitats for establishing and regenerating the ecosystem. Such...
Arizona Groundwater Explorer: Interactive maps for evaluating the historical and current groundwater conditions in wells in Arizona, USA
Fred D. Tillman, Marilyn E. Flynn
2024, Hydrogeology Journal (32) 645-661
Groundwater is an important water source in Arizona, accounting for about 41% of water use in this mostly arid-to-semiarid state in the southwestern United States, and the availability of groundwater resources in the state is a concern. To provide accessible information from depth-to-groundwater data, a series of web-based interactive maps...
High-resolution thermal imagery reveals how interactions between crown structure and genetics shape plant temperature
Peter J. Olsoy, Andrii Zaiats, Donna M. Delparte, Matthew J. Germino, Bryce Richardson, Spencer Roop, Anna V. Roser, Jennifer S. Forbey, Megan E Cattau, Sven Buerki, Keith Reinhardt, Trevor Caughlin
2024, Remote Sensing in Ecology and Conservation (10) 106-120
Understanding interactions between environmental stress and genetic variation is crucial to predict the adaptive capacity of species to climate change. Leaf temperature is both a driver and a responsive indicator of plant physiological response to thermal stress, and methods to monitor it are needed. Foliar temperatures vary across leaf to...