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Publication Extents

Not all publications have extents, not all extents are completely accurate
Soil and geomorphic patterns within relict charcoal hearths could represent unique ecosystem niches
S. Bayuzick, D. Guarin, J. Benavides, A. Bonhage, F. Hirsch, Duane R. Diefenbach, M. McDill, T. Raab, P.J. Drohan
2023, Geomorphology (422)
Hearths used for 19th and 20th century charcoal manufacturing have been found to have unique plant communities or to produce unique growth characteristics for some species but not others. Given known differences in hearth morphology, within hearth physical and chemical differences may exist and result in unique ecologic niches. We...
Monitoring native nonsalmonids for the incidence of gas bubble trauma downstream of Snake and Columbia River dams during the spring spill season, 2022
Kenneth Tiffan, Brad Liedtke, Dalton Dirk Lebeda, Scott Louis Benson, Joe J. Warren
2023, Report
In 2020, a new spill program was implemented to aid the downstream passage of juvenile salmonids at mainstem dams on the Snake and Columbia rivers. Under this program, the total dissolved gas (TDG) cap was increased to 125% and monitoring of native nonsalmonids for gas bubble trauma (GBT) became a...
Comparison of surrogate models to estimate pesticide concentrations at six U.S. Geological Survey National Water Quality Network sites during water years 2013–18
S. Alex Covert, Aubrey R. Bunch, Charles G. Crawford, Gretchen P. Oelsner
2023, Scientific Investigations Report 2022-5109
During water years 2013–18, the U.S. Geological Survey National Water-Quality Assessment Project sampled the National Water Quality Network for Rivers and Streams year-round and reported on 221 pesticides at 72 sites across the United States. Pesticides are difficult to measure, their concentrations often represent discrete snapshots in time, and capturing...
Mineral commodity summaries 2023
U.S. Geological Survey
2023, Mineral Commodity Summaries 2023
Each mineral commodity chapter of the 2023 edition of the U.S. Geological Survey (USGS) Mineral Commodity Summaries (MCS) includes information on events, trends, and issues for each mineral commodity as well as discussions and tabular presentations on domestic industry structure, Government programs, tariffs, 5-year salient statistics, and world production, reserves,...
Proceedings of the Fiscal Year 2022 Annual Reporting Meeting to the Glen Canyon Dam Adaptive Management Program
David J. Topping, Paul E. Grams, Emily C. Palmquist, Joel B. Sankey, Helen C. Fairley, Bridget Deemer, Charles Yackulic, Theodore Kennedy, Anya Metcalfe, Maria C. Dzul, David Ward, Mariah Aurelia Giardina, Lucas Bair, Thomas M. Gushue, Caitlin M. Andrews, Ronald E. Griffiths, David J. Dean, Keith Kohl, Michael J Moran, Nicholas Voichick, Thomas A. Sabol, Laura A. Tennant, Kimberly Dibble, Michael C. Runge
Meredith A. Hartwell, Scott Vanderkooi, editor(s)
2023, Conference Paper
(Hartwell) This report is prepared primarily to account for work conducted and products delivered in FY 2022 by GCMRC and to inform the Technical Work Group of science conducted by GCMRC and its cooperators in support of the Glen Canyon Dam Adaptive Management Program (GCDAMP). It includes a summary of accomplishments,...
Appendix 1: Lake Powell water quality monitoring
Bridget Deemer, Nicholas Voichick, Thomas A. Sabol, Caitlin M. Andrews, Bryce Anthony Mihalevich
2023, Conference Paper, Proceedings of the Fiscal Year 2022 Annual Reporting Meeting to the Glen Canyon Dam Adaptive Management Program
No abstract available. ...
Joint spatiotemporal models to predict seabird densities at sea
Mayumi L. Arimitsu, John F. Piatt, James Thorson, Kathy Kuletz, Gary Drew, Sarah K. Schoen, Dan Cushing, Caitlin Kroeger, William Sydeman
2023, Frontiers in Marine Science (10)
Introduction: Seabirds are abundant, conspicuous members of marine ecosystems worldwide. Synthesis of distribution data compiled over time is required to address regional management issues and understand ecosystem change. Major challenges when estimating seabird densities at sea arise from variability in dispersion of the birds, sampling effort over time and space, and...
Can hydrological models benefit from using global soil moisture, evapotranspiration, and runoff products as calibration targets?
Yiwen Mei, Juliane Mai, Hong Xuan Do, Andrew Gronewold, Howard W. Reeves, Sandra M. Eberts, Richard G. Niswonger, R. Steve Regan, Randall J. Hunt
2023, Water Resources Research (59)
Hydrological models are usually calibrated to in-situ streamflow observations with reasonably long and uninterrupted records. This is challenging for poorly gage or ungaged basins where such information is not available. Even for gaged basins, the single-objective calibration to gaged streamflow cannot guarantee reliable forecasts because, as has...
Variation in leaf reflectance spectra across the California flora partitioned by evolutionary history, geographic origin, and deep time
Daniel M. Griffith, Kristin B. Byrd, Nicole Chin Taylor, Elijah Allan, Liz Bittner, Bart O’Brien, V. Thomas Parker, Michael C Vasey, Ryan Pavlick, Ramakrishna R. Nemani
2023, Journal of Geophysical Research: Biogeosciences (128)
Evolutionary relatedness underlies patterns of functional diversity in the natural world. Hyperspectral remote sensing has the potential to detect these patterns in plants through inherited patterns of leaf reflectance spectra. We collected leaf reflectance data from across the California flora from plants grown in a common garden....
Linear regression model documentation for computing water-quality constituent concentrations or densities using continuous real-time water-quality data for the Kansas River above Topeka Weir at Topeka, Kansas, November 2018 through June 2021
Thomas J. Williams
2023, Scientific Investigations Report 2022-5130
The Kansas River and its associated alluvial aquifer provide drinking water to more than 950,000 people in northeastern Kansas. Water suppliers that rely on the Kansas River as a water-supply source use physical and chemical processes to treat and remove contaminants before public distribution. An early-notification system of changing water-quality...
Colorado River Basin Actionable and Strategic Integrated Science and Technology (ASIST)
Katharine G. Dahm, Daniel K. Jones, Patrick J. Anderson, Meghan C. Dick, Todd Hawbaker, Robert Horton
2023, Fact Sheet 2022-3016
IntroductionThe U.S. Geological Survey (USGS) is initiating a study approach focused on building cross-disciplinary connections to weave together the scientific knowledge related to drought conditions and effects in the Colorado River Basin. The basin is experiencing the worst drought in recorded history, posing unprecedented new challenges in the basin and...
Colorado River Basin Actionable and Strategic Integrated Science and Technology Project—Science strategy
Katharine G. Dahm, Todd Hawbaker, Rebecca J. Frus, Adrian P. Monroe, John B. Bradford, William J. Andrews, Alicia A. Torregrosa, Eric D. Anderson, David J. Dean, Sharon L. Qi
2023, Circular 1502
The U.S. Geological Survey (USGS) conducts a wide variety of science that improves understanding of droughts and their effects on ecosystems and society. This work includes data collection and monitoring of aquatic and terrestrial systems; assessment and analysis of patterns, trends, drivers, and impacts of drought; development and application of...
Chapter 5: Health and diseases
Ralph Vanstreels, Marcella Uhart, Thierry M. Work
2023, Book chapter, Conservation of marine birds
Health and diseases are integral parts of the life of seabirds that merit attention if we expect to truly understand, protect, and conserve them. Diseases such as avian influenza, avian pox, pasteurellosis, and paralytic shellfish poisoning have a proven history of decreasing the survival or breeding success of seabirds. However,...
Using cyanobacteria and other phytoplankton to assess trophic conditions: A qPCR-based, multi-year study in twelve large rivers across the United States
Chiqian Zhang, Kyle D. McIntosh, Nathan Sienkiewicz, Erin A. Stelzer, Jennifer L. Graham, Jingrang Lu
2023, Water Research (235)
Phytoplankton is the essential primary producer in fresh surface water ecosystems. However, excessive phytoplankton growth due to eutrophication significantly threatens ecologic, economic, and public health. Therefore, phytoplankton identification and quantification are essential to understanding the productivity and health of freshwater ecosystems as well as the impacts of phytoplankton overgrowth (such...
Hydrologic change in the St. Louis River Basin from iron mining on the Mesabi Iron Range, northeastern Minnesota
Timothy K. Cowdery, Anna C. Baker, Megan J. Haserodt, Daniel T. Feinstein, Randall J. Hunt
2023, Scientific Investigations Report 2022-5124
This study compares the results of two regional steady-state U.S. Geological Survey Modular Three-Dimensional Finite-Difference Ground-Water Flow (MODFLOW) models constructed to quantify the hydrologic changes in the St. Louis River Basin from iron mining on the Mesabi Iron Range in northeastern Minnesota. The U.S. Geological Survey collaborated in this study...
National Land Cover Database 2019: A comprehensive strategy for creating the 1986-2019 forest disturbance product
Suming Jin, Jon Dewitz, Congcong Li, Daniel G. Sorenson, Zhe Zhu, Rakibul Shogib, Patrick Danielson, Brian Granneman, Catherine Costello, Adam Case, Leila Gass
2023, Journal of Remote Sensing (3)
The National Land Cover Database (NLCD) 2016 products show that, between 2001 and 2016, nearly half of the land cover change in the conterminous United States (CONUS) involved forested areas. To ensure the quality of NLCD land cover and land cover change products, it is important to accurately detect the...
Livestock removal increases plant cover across a heterogeneous dryland landscape on the Colorado Plateau
Brandon E McNellis, Anna C. Knight, Travis W. Nauman, Samuel Norton Chambers, C.W. Brungard, S.E. Fick, C.G. Livensperger, C.G. Borthwick, Michael C. Duniway
2023, Environmental Research Letters (18)
Livestock removal is increasingly used as a management option to mitigate the negative impacts of grazing-related disturbances on rangelands. Removal generally increases plant cover, but it is unclear when, where, and by how much plant and soil cover changes can be expected. On the Colorado Plateau, complex...
Changes in suspended-sediment yields under divergent land-cover disturbance histories: A comparison of two large watersheds, Olympic Mountains, USA
Kristin L. Jaeger, Scott W. Anderson, Sarah B. Dunn
2023, Earth Surface Processes and Landforms (48) 1398-1413
Improvements in timber harvest practices and reductions in harvest volumes over the past half century are commonly presumed to have reduced sediment loads in many western US rivers. However, direct assessments in larger watersheds are relatively sparse. Here, we compare 2019–21 sediment concentrations against those of the...
Peat decomposition and erosion contribute to pond deepening in a temperate salt marsh
Sheron Luk, Meagan J. Eagle, Giulio Mariotti, Kelsey Gosselin, Jonathan Sanderman, Amanda C. Spivak
2023, Biogeosciences (128)
Salt marsh ponds expand and deepen over time, potentially reducing ecosystem carbon storage and resilience. The water filled volumes of ponds represent missing carbon due to prevented soil accumulation and removal by erosion and decomposition. Removal mechanisms have different implications as eroded carbon can be redistributed while decomposition...
iBluff: An open-source R package for geomorphic analysis of coastal bluffs/cliffs
Monica Palaseanu-Lovejoy
2023, SoftwareX (21)
The R package iBluff is designed for coastal bluffs/bluffs morphological analysis and offers an automatic and reproducible alternative to identify bluff edges using a bare earth digital elevation model (DEM) instead of hand digitizing. This package extracts elevation profiles along automatically identified transects on...
Assimilating ecological theory with empiricism: Using constrained generalized additive models to enhance survival analyses
Alison Ketz, Daniel J. Storm, Rachel Barker, Anthony D. Apa, Cristian Oliva-Aviles, Daniel P. Walsh
2023, Methods in Ecology and Evolution (14) 952-967
1. Integrating ecological theory with empirical methods is ubiquitous in ecology using hierarchical Bayesian models. However, there has been little development focused on integration of ecological theory into models for survival analysis. Survival is a fundamental process, linking individual fitness with population dynamics, but incorporating life history strategies to inform...
The first documented interaction between a long-tailed weasel (Mustela frenata) and a plains spotted skunk (Spilogale interrupta) carcass
K.M. White, Joshua D. Stafford, Robert Charles Lonsinger
2023, Ecology and Evolution (13)
A novel interaction between a long-tailed weasel (Mustela frenata) and a plains spotted skunk (Spilogale interrupta) carcass is detailed. In November 2020, a farmer in Edmunds County in north-central South Dakota sent in a video recording of a long-tailed weasel with a spotted skunk carcass. Location of the event, carcass...
Lessons learned in knowledge co-production for climate-smart decision-making
Alyssa Rosemartin, Theresa Crimmins, Katherine L. Gerst, Erin E. Posthumus, Aaron R. Ramirez, Cynthia S. Wallace, Toni Lyn Morelli
2023, Environmental Science and Policy (141) 178-187
Knowledge co-production, a process that involves both creators and users of information in knowledge generation, is growing in popularity in the conservation and ecology fields. While examples of successful co-production are becoming more common, many barriers and challenges remain in this...
Estimating parasite infrapopulation size given imperfect detection: Proof-of-concept with ectoparasitic fleas on prairie dogs
David A. Eads, Kathryn P. Huyvaert, Dean E. Biggins
2023, International Journal for Parasitology: Parasites and Wildlife (20) 117-121
Parasite infrapopulation size - the population of parasites affecting a single host - is a central metric in parasitology. However, parasites are small and elusive such that imperfect detection is expected. Repeated sampling of parasites during primary sampling occasions (e.g., each host capture) informs the detection process. Here, we estimate...
Viability of side-scan sonar to enumerate Paddlefish, a large pelagic freshwater fish, in rivers and reservoirs
Wyatt Wolfenkoehler, James M. Long, Ryan Gary, Richard A. Snow, Jason D. Schooley, Lindsey Ann Bruckerhoff, Robert Charles Lonsinger
2023, Fisheries Research (261)
Recreational-grade side-scan sonar (SSS) has become an invaluable tool for inland fisheries, particularly when characterizing underwater habitat, but it is being increasingly used for enumerating large-bodied (> 1 m total length [TL]) aquatic fauna. We used SSS in river and reservoir environments to evaluate methods for identifying and counting Paddlefish Polyodon spathula, a large...