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Publication Extents

Not all publications have extents, not all extents are completely accurate
Holocene evolution of diatom and silicoflagellate paleoceanography in Slocum Arm, a fjord in southeastern Alaska
John A. Barron, David Bukry, Jason A. Addison, Thomas A. Ager
2016, Marine Micropaleontology (126) 1-18
Diatom and silicoflagellate assemblages in cores EW0408-47JC, -47TC, -46MC (57° 34.5278′ N, 136° 3.7764′ W, 114 m water depth) taken from the outer portion of Slocum Arm, a post-glacial fjord in southeastern Alaska, reveal the paleoclimatic and paleoceanographic evolution of the eastern margin of the Gulf of Alaska (GoA) during the...
Seasonal and diel effects on acoustic fish biomass estimates: application to a shallow reservoir with untargeted common carp (Cyprinus carpio)
Imed Djemali, Daniel L. Yule, Jean Guillard
2016, Marine and Freshwater Research (68) 528-537
The aim of the present study was to understand how seasonal fish distributions affect acoustically derived fish biomass estimates in a shallow reservoir in a semi-arid country (Tunisia). To that end, sampling events were performed during four seasons (spring (June), summer (September), autumn (December) and winter (March)) that included day...
Cyanotoxins in inland lakes of the United States: Occurrence and potential recreational health risks in the EPA National Lakes Assessment 2007
Keith A. Loftin, Jennifer L. Graham, Elizabeth Hilborn, Sarah Lehmann, Michael T. Meyer, Julie E. Dietze, Christopher Griffith
2016, Harmful Algae (56) 77-90
A large nation-wide survey of cyanotoxins (1161 lakes) in the United States (U.S.) was conducted during the EPA National Lakes Assessment 2007. Cyanotoxin data were compared with cyanobacteria abundance- and chlorophyll-based World Health Organization (WHO) thresholds and mouse toxicity data to evaluate potential recreational risks. Cylindrospermopsins, microcystins, and saxitoxins were...
Suspended sediment delivery to Puget Sound from the lower Nisqually River, western Washington, July 2010–November 2011
Christopher A. Curran, Eric E. Grossman, Christopher S. Magirl, James R. Foreman
2016, Scientific Investigations Report 2016-5062
On average, the Nisqually River delivers about 100,000 metric tons per year (t/yr) of suspended sediment to Puget Sound, western Washington, a small proportion of the estimated 1,200,000 metric tons (t) of sediment reported to flow in the upper Nisqually River that drains the glaciated, recurrently active Mount Rainier...
Total cylindrospermopsins, microcystins/nodularins, and saxitoxins data for the 2007 United States Environmental Protection Agency National Lake Assessment
Keith A. Loftin, Julie E. Dietze, Michael T. Meyer, Jennifer L. Graham, Megan M. Maksimowicz, Kathryn D. Toyne
2016, Data Series 929
Phytoplankton communities in freshwater lakes, ponds, and reservoirs may be dominated by cyanobacteria (also called blue-green algae) under certain environmental conditions. Cyanobacteria may cause a range of water-quality impairments, including the potential for toxin production. Cyanobacteria toxins (cyanotoxins) may adversely impact human and ecological health. Microcystins are considered to be...
Potential effects of sea-level rise on the depth to saturated sediments of the Sagamore and Monomoy flow lenses on Cape Cod, Massachusetts
Donald A. Walter, Timothy D. McCobb, John P. Masterson, Michael N. Fienen
2016, Scientific Investigations Report 2016-5058
In 2014, the U.S. Geological Survey, in cooperation with the Association to Preserve Cape Cod, the Cape Cod Commission, and the Massachusetts Environmental Trust, began an evaluation of the potential effects of sea-level rise on water table altitudes and depths to water on central and western Cape Cod, Massachusetts. Increases...
Evaluation of flood inundation in Crystal Springs Creek, Portland, Oregon
Adam Stonewall, Glen Hess
2016, Open-File Report 2016-1079
Efforts to improve fish passage have resulted in the replacement of six culverts in Crystal Springs Creek in Portland, Oregon. Two more culverts are scheduled to be replaced at Glenwood Street and Bybee Boulevard (Glenwood/Bybee project) in 2016. Recently acquired data have allowed for a more comprehensive understanding of the...
Purgeable organic compounds at or near the Idaho Nuclear Technology and Engineering Center, Idaho National Laboratory, Idaho, 2015
Neil V. Maimer, Roy C. Bartholomay
2016, Open-File Report 2016-1083
During 2015, the U.S. Geological Survey, in cooperation with the U.S. Department of Energy, collected groundwater samples from 31 wells at or near the Idaho Nuclear Technology and Engineering Center (INTEC) at the Idaho National Laboratory for purgeable organic compounds (POCs). The samples were collected and analyzed for the...
Comparison of hydraulics and particle removal efficiencies in a mixed cell raceway and Burrows pond rearing system
Christine M. Moffitt
2016, Aquacultural Engineering (74) 52-61
We compared the hydrodynamics of replicate experimental mixed cell and replicate standard Burrows pond rearing systems at the Dworshak National Fish Hatchery, ID, in an effort to identify methods for improved solids removal. We measured and compared the hydraulic residence time, particle removal efficiency, and measures of velocity using several...
Methylmercury degradation and exposure pathways in streams and wetlands impacted by historical mining
Patrick M. Donovan, Joel D. Blum, Michael B. Singer, Mark C. Marvin-DiPasquale, Martin T.K. Tsui
2016, Science of the Total Environment (568) 1192-1203
Monomethyl mercury (MMHg) and total mercury (THg) concentrations and Hg stable isotope ratios (δ202Hg and Δ199Hg) were measured in sediment and aquatic organisms from Cache Creek (California Coast Range) and Yolo Bypass (Sacramento Valley). Cache Creek sediment had a large range in THg (87 to 3870 ng/g) and δ202Hg (−1.69...
Invasive European bird cherry disrupts stream-riparian linkages: effects on terrestrial invertebrate prey subsidies for juvenile coho salmon
David A. Roon, Mark S. Wipfli, Tricia L. Wurtz, Arny L. Blanchard
2016, Canadian Journal of Fisheries and Aquatic Sciences (73) 1679-1690
The spread of invasive species in riparian forests has the potential to affect both terrestrial and aquatic organisms linked through cross-ecosystem resource subsidies. However, this potential had not been explored in regards to terrestrial prey subsidies for stream fishes. To address this, we examined the effects of an invasive riparian...
Development of a decision support tool for water and resource management using biotic, abiotic, and hydrological assessments of Topock Marsh, Arizona
Christopher Holmquist-Johnson, Leanne Hanson, Joan Daniels, Colin Talbert, Jeanette Haegele
2016, Open-File Report 2016-1065
Topock Marsh is a large wetland adjacent to the Colorado River and the main feature of Havasu National Wildlife Refuge (Havasu NWR) in southern Arizona. In 2010, the U.S. Fish and Wildlife Service (FWS) and Bureau of Reclamation began a project to improve water management capabilities at Topock Marsh and...
Methane and sulfate dynamics in sediments from mangrove-dominated tropical coastal lagoons, Yucatan, Mexico
P. C. Chuang, Megan B. Young, Andrew W. Dale, Laurence G. Miller, Jorge A. Herrera-Silveira, Adina Paytan
2016, Biogeosciences (13) 2981-3001
Porewater profiles in sediment cores from mangrove-dominated coastal lagoons (Celestún and Chelem) on the Yucatán Peninsula, Mexico, reveal the widespread coexistence of dissolved methane and sulfate. This observation is interesting since dissolved methane in porewaters is typically oxidized anaerobically by sulfate. To explain the observations we used a numerical transport-reaction...
Sediment data collected in 2014 from Barnegat Bay, New Jersey
Julie Bernier, Chelsea Stalk, Kyle W. Kelso, Jennifer L. Miselis, Rob Tunstead
2016, Data Series 985
In response to the 2010 Governor’s Action Plan to clean up the Barnegat Bay–Little Egg Harbor (BBLEH) estuary in New Jersey, the U.S. Geological Survey (USGS) partnered with the New Jersey Department of Environmental Protection in 2011 to begin a multidisciplinary research project to understand the physical controls on water...
Presence of rapidly degrading permafrost plateaus in south-central Alaska
Benjamin M. Jones, Carson Baughman, Vladimir E. Romanovsky, Andrew D. Parsekian, Esther Babcock, Eva Stephani, Miriam C. Jones, Guido Grosse, Edward E Berg
2016, The Cryosphere (10) 2673-2692
Permafrost presence is determined by a complex interaction of climatic, topographic, and ecological conditions operating over long time scales. In particular, vegetation and organic layer characteristics may act to protect permafrost in regions with a mean annual air temperature (MAAT) above 0 °C. In this study, we document the presence of residual...
Persistence and microbial source tracking of Escherichia coli at a swimming beach at Lake of the Ozarks State Park, Missouri
Jordan L. Wilson, John G. Schumacher, Joel G. Burken
2016, Journal of the American Water Resources Association (52) 508-522
The Missouri Department of Natural Resources (MDNR) has closed or posted advisories at public beaches at Lake of the Ozarks State Park in Missouri because of Escherichia coli (E. coli) concentration exceedances in recent years. Spatial and temporal patterns of E. coliconcentrations, microbial source tracking, novel sampling techniques, and beach-use patterns were studied during the...
Observations of wave transformation over a fringing coral reef and the importance of low-frequency waves and offshore water levels to runup, overwash, and coastal flooding
Olivia Cheriton, Curt D. Storlazzi, Kurt J. Rosenberger
2016, Journal of Geophysical Research C: Oceans (121) 3121-3140
Many low-lying tropical islands are susceptible to sea level rise and often subjected to overwash and flooding during large wave events. To quantify wave dynamics and wave-driven water levels on fringing coral reefs, a 5 month deployment of wave gauges and a current meter was conducted across two shore-normal transects...
Algorithms used in the Airborne Lidar Processing System (ALPS)
David B. Nagle, C. Wayne Wright
2016, Open-File Report 2016-1046
The Airborne Lidar Processing System (ALPS) analyzes Experimental Advanced Airborne Research Lidar (EAARL) data—digitized laser-return waveforms, position, and attitude data—to derive point clouds of target surfaces. A full-waveform airborne lidar system, the EAARL seamlessly and simultaneously collects mixed environment data, including submerged, sub-aerial bare earth, and vegetation-covered topographies.ALPS uses three...
Biological soil crusts: An organizing principle in dryland ecosystems (aka: the role of biocrusts in arid land hydrology)
Sonia Chamizo, Jayne Belnap, David J Elridge, Oumarou M Issa
2016, Book chapter, Ecological studies
Biocrusts exert a strong influence on hydrological processes in drylands by modifying numerous soil properties that affect water retention and movement in soils. Yet, their role in these processes is not clearly understood due to the large number of factors that act simultaneously and can mask the biocrust effect. The...
Patterns and controls on nitrogen cycling of biological soil crusts
Nichole N. Barger, Eli Zaady, Bettina Weber, Ferran Garcia-Pichel, Jayne Belnap
2016, Book chapter
Biocrusts play a significant role in the nitrogen [N ] cycle within arid and semi-arid ecosystems, as they contribute major N inputs via biological fixation and dust capture, harbor internal N transformation processes, and direct N losses via N dissolved, gaseous and erosional loss processes (Fig. 1). Because soil...
Proceedings of the 12th Biennial Conference of research on the Colorado Plateau
Barbara E. Ralston, editor(s)
2016, Scientific Investigations Report 2015-5180
Introduction The Colorado Plateau is a physiographic region that encompasses 330,000 square kilometers in parts of four states in the southwestern United States (Colorado, Utah, New Mexico, and Arizona). Known for its high deserts, the Colorado Plateau also includes isolated mountains, high plateaus, and rugged canyons. Not only is the region...
Waterfowl endozoochory: An overlooked long-distance dispersal mode for Cuscuta (dodder)
Mihai Costea, Sasa Stefanovic, Miguel A. Garcia, Susan De La Cruz, Michael L. Casazza, Andy J. Green
2016, American Journal of Botany (103) 957-962
REMISE OF THE STUDY: Dispersal of parasitic Cuscuta species (dodders) worldwide has been assumed to be largely anthropomorphic because their seeds do not match any previously known dispersal syndrome and no natural dispersal vectors have been reliably documented. However, the genus has a subcosmopolitan distribution and recent phylogeographic results have...
Toward improved simulation of river operations through integration with a hydrologic model
Eric D. Morway, Richard G. Niswonger, Enrique Triana
2016, Environmental Modelling and Software 255-274
Advanced modeling tools are needed for informed water resources planning and management. Two classes of modeling tools are often used to this end–(1) distributed-parameter hydrologic models for quantifying supply and (2) river-operation models for sorting out demands under rule-based systems such as the prior-appropriation doctrine. Within each of these two...
Aquatic Trophic Productivity model: A decision support model for river restoration planning in the Methow River, Washington
Joseph R. Benjamin, J. Ryan Bellmore
2016, Open-File Report 2016-1075
Introduction The U.S. Geological Survey (USGS) has developed a dynamic food-web simulation model to provide decision support for Bureau of Reclamation (Reclamation) river restoration projects in the Methow River, Washington. This modeling effort was done to contribute to Reasonable and Prudent Alternative actions 56 and 57of the 2014 Federal Columbia River...
Changing levels of heavy metal accumulation in birds at Tumacacori National Historic Park along the Upper Santa Cruz River Watershed in southern Arizona
Charles van Riper III, Michael B. Lester
2016, Conference Paper, Engagement, education, and expectations - the future of parks and protected areas: Proceedings of the 2015 George Wright Society Conference on Parks, Protected Areas, and Cultural Sites
National Parks and other protected areas can be influenced by contamination from outside their boundaries. This is particularly true of smaller parks and those in riparian ecosystems, a habitat that in arid environments provides critical habitat for breeding, migratory, and wintering birds. Animals living in contaminated areas are susceptible to...