Assessing the role of seabirds in the ecology of influenza A viruses
Andrew S. Lang, Camille Lebarbenchon, Andrew M. Ramey, Gregory J. Robertson, Jonas Waldenstrom, Michelle Wille
2016, Avian Diseases (60) 378-386
Wild waterbirds, specifically waterfowl, gulls, and shorebirds, are recognized as the primordial reservoir of influenza A viruses (IAVs). However, the role of seabirds, an abundant, diverse, and globally distributed group of birds, in the perpetuation and transmission of IAVs is less clear. Here we summarize published and publicly available data...
Developing fish trophic interaction indicators of climate change for the Great Lakes
Richard T. Kraus, Carey T. Knight, Ann Marie Gorman, Patrick M. Kocovsky, Brian Weidel, Mark W. Rogers
2016, Report
This project addressed regional climate change effects on aquatic food webs in the Great Lakes. We sought insights by examining Lake Erie as a representative system with a high level of anthropogenic impacts, strong nutrient gradients, seasonal hypoxia, and spatial overlap of cold- and cool-water fish guilds. In Lake Erie...
Organic petrology and geochemistry of Eocene Suzak bituminous marl, north-central Afghanistan: Depositional environment and source rock potential
Paul C. Hackley, John Sanfilipo
2016, Marine and Petroleum Geology (73) 572-589
Organic geochemistry and petrology of Eocene Suzak bituminous marl outcrop samples from Madr village in north-central Afghanistan were characterized via an integrated analytical approach to evaluate depositional environment and source rock potential. Multiple proxies suggest the organic-rich (TOC ∼6 wt.%) bituminous marls are ‘immature’ for oil generation (e.g., vitrinite Ro < 0.4%, Tmax < 425 °C,...
Trends in pesticide use on soybean, corn and cotton since the introduction of major genetically modified crops in the United States
Richard H. Coupe, Paul D. Capel
2016, Pest Management Science (72) 1013-1022
BACKGROUNDGenetically modified (GM) varieties of soybean, corn and cotton have largely replaced conventional varieties in the United States. The most widely used applications of GM technology have been the development of crops that are resistant to a specific broad-spectrum herbicide (primarily glyphosate) or that produce insecticidal compounds within the plant...
Challenges for mapping cyanotoxin patterns from remote sensing of cyanobacteria
Rick P Stumpf, Timothy W. Davis, Timothy T. Wynne, Jennifer L. Graham, Keith A. Loftin, T.H. Johengen, D. Gossiaux, D. Palladino, A. Burtner
2016, Harmful Algae (54) 160-173
Using satellite imagery to quantify the spatial patterns of cyanobacterial toxins has several challenges. These challenges include the need for surrogate pigments – since cyanotoxins cannot be directly detected by remote sensing, the variability in the relationship between the pigments and cyanotoxins – especially microcystins (MC), and the lack of...
Contaminants in urban waters—Science capabilities of the U.S. Geological Survey
John D. Jastram, Kenneth E. Hyer
2016, Fact Sheet 2016-3024
Streams and estuaries with urban watersheds commonly exhibit increased streamflow and decreased base flow; diminished stream-channel stability; excessive amounts of contaminants such as pesticides, metals, industrial and municipal waste, and combustion products; and alterations to biotic community structure. Collectively, these detrimental effects have been termed the “urban-stream syndrome.” Water-resource managers...
Urban development and stream ecosystem health—Science capabilities of the U.S. Geological Survey
Pamela A. Reilly, Zoltan Szabo, James F. Coles
2016, Fact Sheet 2016-3026
Urban development creates multiple stressors that can degrade stream ecosystems by changing stream hydrology, water quality, and physical habitat. Contaminants, habitat destruction, and increasing streamflow variability resulting from urban development have been associated with the disruption of biological communities, particularly the loss of sensitive aquatic biota. Understanding how algal, invertebrate,...
Urban hydrology—Science capabilities of the U.S. Geological Survey
Joseph M. Bell, Amy E. Simonson, Irene J. Fisher
2016, Fact Sheet 2016-3023
Urbanization affects streamflow characteristics, coastal flooding, and groundwater recharge. Increasing impervious areas, streamflow diversions, and groundwater pumpage are some of the ways that the natural water cycle is affected by urbanization. Assessment of the relations among these factors and changes in land use helps water-resource managers with issues such as...
Urban infrastructure and water management—Science capabilities of the U.S. Geological Survey
Shawn C. Fisher, Rosemary M. Fanelli, William R. Selbig
2016, Fact Sheet 2016-3025
Managing the urban-water cycle has increasingly become a challenge for water-resources planners and regulators faced with the problem of providing clean drinking water to urban residents. Sanitary and combined sanitary and storm sewer networks convey wastewater to centralized treatment plants. Impervious surfaces, which include roads, parking lots, and buildings, increase...
Seasonal patterns in carbon dioxide in 15 mid-continent (USA) reservoirs
John R. Jones, Daniel V. Obrecht, Jennifer L. Graham, Michelle B. Balmer, Christopher T. Filstrup, John A. Downing
2016, Inland Waters (2) 265-272
Evidence suggests that lakes are important sites for atmospheric CO2 exchange and so play a substantial role in the global carbon budget. Previous research has 2 weaknesses: (1) most data have been collected only during the open-water or summer seasons, and (2) data are concentrated principally on natural lakes in...
Direct observations of ice seasonality reveal changes in climate over the past 320–570 years
Sapna Sharma, John J. Magnuson, Ryan D. Batt, Luke Winslow, Johanna Korhonen, Yasuyuki Aono
2016, Scientific Reports (6)
Lake and river ice seasonality (dates of ice freeze and breakup) responds sensitively to climatic change and variability. We analyzed climate-related changes using direct human observations of ice freeze dates (1443–2014) for Lake Suwa, Japan, and of ice breakup dates (1693–2013) for Torne River, Finland. We found a rich array...
Spatial and temporal patterns of mercury concentrations in freshwater fish across the Western United States and Canada
Collin A. Eagles-Smith, Joshua T. Ackerman, James J. Willacker, Michael T. Tate, Michelle A. Lutz, Jacob Fleck, A. Robin Stewart, James G. Wiener, David C. Evers, Jesse M. Lepak, Jay A. Davis, Colleen Flanagan Pritz
2016, Science of the Total Environment (568) 1171-1184
Methylmercury contamination of fish is a global threat to environmental health. Mercury (Hg) monitoring programs are valuable for generating data that can be compiled for spatially broad syntheses to identify emergent ecosystem properties that influence fish Hg bioaccumulation. Fish total Hg (THg) concentrations were evaluated across the Western United States...
Fluctuating water depths affect American alligator (Alligator mississippiensis) body condition in the Everglades, Florida, USA
Laura A. Brandt, Jeffrey S. Beauchamp, Brian M. Jeffery, Michael S. Cherkiss, Frank J. Mazzotti
2016, Ecological Indicators (67) 441-450
Successful restoration of wetland ecosystems requires knowledge of wetland hydrologic patterns and an understanding of how those patterns affect wetland plant and animal populations.Within the Everglades, Florida, USA restoration, an applied science strategy including conceptual ecological models linking drivers to indicators is being used to organize current scientific understanding to...
Interactions between hatch dates, growth rates, and mortality of Age-0 native Rainbow Smelt and nonnative Alewife in Lake Champlain
Donna L. Parrish, Paul W. Simonin, Lars G. Rudstam, Bernard Pientka, Patrick J. Sullivan
2016, Transactions of the American Fisheries Society (145) 649-656
Timing of hatch in fish populations can be critical for first-year survival and, therefore, year-class strength and subsequent species interactions. We compared hatch timing, growth rates, and subsequent mortality of age-0 Rainbow Smelt Osmerus mordax and Alewife Alosa pseudoharengus, two common open-water fish species of northern North America. In our study site, Lake...
Numerical experiments to explain multiscale hydrological responses to mountain pine beetle tree mortality in a headwater watershed
Colin A. Penn, Lindsay A. Bearup, Reed M. Maxwell, David W. Clow
2016, Water Resources Research (52) 3143-3161
The effects of mountain pine beetle (MPB)-induced tree mortality on a headwater hydrologic system were investigated using an integrated physical modeling framework with a high-resolution computational grid. Simulations of MPB-affected and unaffected conditions, each with identical atmospheric forcing for a normal water year, were compared at multiple scales to evaluate...
U.S. Geological Survey response to flooding in Texas, May–June 2015
Jeffery W. East
2016, Fact Sheet 2016-3027
As a Federal science agency within the Department of the Interior, the U.S. Geological Survey (USGS) collects and disseminates streamflow stage and discharge information along with other types of water information as a major part of its Water mission area. Data collected at USGS streamflow-gaging stations (hereinafter referred to as...
Analysis of stable isotope ratios (δ18O and δ2H) in precipitation of the Verde River watershed, Arizona 2003 through 2014
Kimberly R. Beisner, Nicholas V. Paretti, Rachel S. Tucci
2016, Open-File Report 2016-1053
Stable isotope delta values (δ18O and δ2H) of precipitation can vary with elevation, and quantification of the precipitation elevation gradient can be used to predict recharge elevation within a watershed. Precipitation samples were analyzed for stable isotope delta values between 2003 and 2014 from the Verde River watershed of north-central...
Can the eastern red-backed salamander (Plethodon cinereus) persist in an acidified landscape?
Cheryl A Bondi, Colin M. Beier, Peter K Ducey, Gregory B. Lawrence, Scott W. Bailey
2016, Ecosphere (7)
Hardwood forests of eastern North America have experienced decades of acidic deposition, leading to soil acidification where base cation supply was insufficient to neutralize acid inputs. Negative impacts of soil acidity on amphibians include disrupted embryonic development, lower growth rates, and habitat loss. However, some amphibians exhibit intraspecific variation in...
A new look at liming as an approach to accelerate recovery from acidic deposition effects
Gregory B. Lawrence, Douglas A. Burns, Karen Riva-Murray
2016, Science of the Total Environment (562) 35-46
Acidic deposition caused by fossil fuel combustion has degraded aquatic and terrestrial ecosystems in North America for over four decades. The only management option other than emissions reductions for combating the effects of acidic deposition has been the application of lime to neutralize acidity after it has been deposited on...
Historical water-quality data from the Harlem River, New York
Shawn C. Fisher
2016, Scientific Investigations Report 2016-5044
Data specific to the Harlem River, New York, have been summarized and are presented in this report. The data illustrate improvements in the quality of water for the past 65 years and emphasize the importance of a continuous water-quality record for establishing trends in environmental conditions. Although there is a...
The Northeast Stream Quality Assessment
Peter C. Van Metre, Karen Riva-Murray, James F. Coles
2016, Fact Sheet 2016-3021
In 2016, the U.S. Geological Survey (USGS) National Water-Quality Assessment (NAWQA) is assessing stream quality in the northeastern United States. The goal of the Northeast Stream Quality Assessment (NESQA) is to assess the quality of streams in the region by characterizing multiple water-quality factors that are stressors to aquatic life...
The structure of genetic diversity in eelgrass (Zostera marina L.) along the North Pacific and Bering Sea coasts of Alaska
Sandra L. Talbot, George K. Sage, Jolene R. Rearick, Megan C. Fowler, Raquel Muñiz-Salazar, Bethany Baibak, Sandy Wyllie-Echeverria, Alehandro Cabello-Pasini, David H. Ward
2016, PLoS ONE (11)
Eelgrass (Zostera marina) populations occupying coastal waters of Alaska are separated by a peninsula and island archipelago into two Large Marine Ecosystems (LMEs). From populations in both LMEs, we characterize genetic diversity, population structure, and polarity in gene flow using nuclear microsatellite fragment and chloroplast and nuclear sequence data. An...
Modeling flow, sediment transport and morphodynamics in rivers
Jonathan M. Nelson, Richard R. McDonald, Yasuyuki Shimizu, Ichiro Kimura, Mohamed Nabi, Kazutake Asahi
2016, Book chapter
Predicting the response of natural or man-made channels to imposed supplies of water and sediment is one of the difficult practical problems commonly addressed by fluvial geomorphologists. This problem typically arises in three situations. In the first situation, geomorphologists are attempting to understand why a channel or class of channels...
The source of groundwater and solutes to Many Devils Wash at a former uranium mill site in Shiprock, New Mexico
Andrew J. Robertson, Anthony J. Ranalli, Stephen A. Austin, Bryan R. Lawlis
2016, Scientific Investigations Report 2016-5031
The Shiprock Disposal Site is the location of the former Navajo Mill (Mill), a uranium ore-processing facility, located on a terrace overlooking the San Juan River in the town of Shiprock, New Mexico. Following the closure of the Mill, all tailings and associated materials were encapsulated in a disposal cell...
Assessing atmospheric concentration of polychlorinated biphenyls (PCBs) by evergreen Rhododendron maximum next to a contaminated stream
Viet D. Dang, David Walters, Cindy M. Lee
2016, Environmental Toxicology and Chemistry (35) 2192-2198
Conifers are often used as an “air passive sampler”, but few studies have focused on the implication of broadleaf evergreens to monitor atmospheric semivolatile organic compounds such as polychlorinated biphenyls (PCBs). In this study, we used Rhododendron maximum (rhododendron) growing next to a contaminated stream to assess atmospheric PCB concentrations. The study...