High rates of detection of Clade 2.3.4.4 Highly Pathogenic Avian Influenza H5 viruses in wild birds in the Pacific Northwest during the winter of 2014-2015
S. Ip, Robert J. Dusek, Barbara L. Bodenstein, Mia Kim Torchetti, Paul DeBruyn, Kristin G. Mansfield, Thomas J. DeLiberto, Jonathan M. Sleeman
2016, Avian Diseases (60) 354-358
In 2014, Clade 2.3.4.4 H5N8 highly pathogenic avian influenza (HPAI) viruses spread across the Republic of Korea and ultimately were reported in China, Japan, Russia and Europe. Mortality associated with a reassortant HPAI H5N2 virus was detected in poultry farms in Western Canada at the end of November. The same...
Differentiating sex and species of Western Grebes (Aechmophorus occidentalis) and Clark's Grebes (Aechmophorus clarkii) and their eggs using external morphometrics and discriminant function analysis
C. Alex Hartman, Joshua T. Ackerman, Collin A. Eagles-Smith, Mark P. Herzog
2016, Waterbirds (39) 13-26
In birds where males and females are similar in size and plumage, sex determination by alternative means is necessary. Discriminant function analysis based on external morphometrics was used to distinguish males from females in two closely related species: Western Grebe (Aechmophorus occidentalis) and Clark's Grebe (A. clarkii). Additionally, discriminant function...
Semi-arid vegetation response to antecedent climate and water balance windows
David P. Thoma, Seth M. Munson, Kathryn M. Irvine, Dana L. Witwicki, Erin Bunting
2016, Applied Vegetation Science (19) 413-429
Questions Can we improve understanding of vegetation response to water availability on monthly time scales in semi-arid environments using remote sensing methods? What climatic or water balance variables and antecedent windows of time associated with these variables best relate to the condition of vegetation? Can we develop credible...
Effect of variable annual precipitation and nutrient input on nitrogen and phosphorus transport from two Midwestern agricultural watersheds
Stephen J. Kalkhoff, Laura E. Hubbard, Mark D. Tomer, D.E. James
2016, Science of the Total Environment (559) 53-62
Precipitation patterns and nutrient inputs affect transport of nitrate (NO3-N) and phosphorus (TP) from Midwest watersheds. Nutrient concentrations and yields from two subsurface-drained watersheds, the Little Cobb River (LCR) in southern Minnesota and the South Fork Iowa River (SFIR) in northern Iowa, were evaluated during 1996–2007 to document relative differences...
Report of the River Master of the Delaware River for the period December 1, 2008–November 30, 2009
Bruce E. Krejmas, Gary N. Paulachok, Mason Jr., Marie Owens
2016, Open-File Report 2015-1231
A Decree of the Supreme Court of the United States, entered June 7, 1954, established the position of Delaware River Master within the U.S. Geological Survey (USGS). In addition, the Decree authorizes diversions of water from the Delaware River Basin and requires compensating releases from certain reservoirs, owned by New...
Logistic and linear regression model documentation for statistical relations between continuous real-time and discrete water-quality constituents in the Kansas River, Kansas, July 2012 through June 2015
Guy M. Foster, Jennifer L. Graham
2016, Open-File Report 2016-1040
The Kansas River is a primary source of drinking water for about 800,000 people in northeastern Kansas. Source-water supplies are treated by a combination of chemical and physical processes to remove contaminants before distribution. Advanced notification of changing water-quality conditions and cyanobacteria and associated toxin and taste-and-odor compounds provides drinking-water...
Effect of a levee setback on aquatic resources using two-dimensional flow and bioenergetics models
Robert W. Black, Christiana R. Czuba, Christopher S. Magirl, Sarah McCarthy, Hans Berge, Kyle Comanor
2016, Scientific Investigations Report 2016-5025
Watershed restoration is the focus of many resource managers and can include a multitude of restoration actions each with specific restoration objectives. For the White River flowing through the cities of Pacific and Sumner, Washington, a levee setback has been proposed to reconnect the river with its historical floodplain...
Hydrologic monitoring for Chicago’s Sustainable Streetscapes Program
James J. Duncker, William S. Morrow
2016, Fact Sheet 2016-3014
The Chicago Department of Transportation’s Sustainable Streetscapes Program is an innovative program that strives to convert Chicago’s neighborhood commercial areas, riverwalks, and bicycle facilities into active, attractive places for Chicagoans to live, work, and play. The objective of each project is to create flourishing public places while improving the ability...
Simulation of hypothetical Asian carp egg and larvae development and transport in the Lockport, Brandon Road, Dresden Island, and Marseilles Pools of the Illinois Waterway by use of the Fluvial Egg Drift Simulator (FluEgg) model
Elizabeth A. Murphy, Tatiana Garcia, P. Ryan Jackson, James J. Duncker
2016, Open-File Report 2016-1011
As part of the Great Lakes and Mississippi River Interbasin Study, the U.S. Army Corps of Engineers (USACE) is conducting an assessment of the vulnerability of the Chicago Area Waterway System and Des Plaines River to Asian carp (specifically, Hypophthalmichthys nobilis (bighead carp) and Hypophthalmichthys molitrix (silver carp)) spawning and...
Toxicity of waters from the Rochester Embayment Area of Concern to the plankton species Pseudokirchneriella subcapitata and Ceriodaphnia dubia
Barry P. Baldigo, Brian T. Duffy, Alexander J. Smith, Scott D. George
2016, Journal of Great Lakes Research (42) 464-471
The lower Genesee River and Rochester Embayment of Lake Ontario are a designated Area of Concern (AOC) under the binational Great Lakes Water Quality Agreement. The “degradation of phytoplankton and zooplankton populations” or plankton Beneficial Use Impairment (BUI) was classified as unknown and in need of further assessment...
Methods for estimating streamflow characteristics at ungaged sites in western Montana based on data through water year 2009: Chapter G in Montana StreamStats
Peter McCarthy, Roy Sando, Steven K. Sando, DeAnn M. Dutton
2016, Scientific Investigations Report 2015-5019-G
The U.S. Geological Survey, in cooperation with the Montana Department of Environmental Quality and the Montana Department of Natural Resources and Conservation, developed regional regression equations based on basin and streamflow characteristics for streamflow-gaging stations through water year 2009 that can be used to estimate streamflow characteristics for ungaged sites...
Temporal trends and stationarity in annual peak flow and peak-flow timing for selected long-term streamflow-gaging stations in or near Montana through water year 2011: Chapter B in Montana StreamStats
Steven K. Sando, Peter McCarthy, Roy Sando, DeAnn M. Dutton
2016, Scientific Investigations Report 2015-5019-B
A large-scale study by the U.S. Geological Survey, in cooperation with the Montana Department of Transportation and the Montana Department of Natural Resources and Conservation, was done to investigate general patterns in peak-flow temporal trends and stationarity through water year 2011 for 24 long-term streamflow-gaging stations (hereinafter referred to as...
Peak-flow frequency analyses and results based on data through water year 2011 for selected streamflow-gaging stations in or near Montana: Chapter C in Montana StreamStats
Steven K. Sando, Peter McCarthy, DeAnn M. Dutton
2016, Scientific Investigations Report 2015-5019-C
Chapter C of this Scientific Investigations Report documents results from a study by the U.S. Geological Survey, in cooperation with the Montana Department of Transportation and the Montana Department of Natural Resources, to provide an update of statewide peak-flow frequency analyses and results for Montana. The purpose of this report...
Methods for estimating peak-flow frequencies at ungaged sites in Montana based on data through water year 2011: Chapter F in Montana StreamStats
Roy Sando, Steven K. Sando, Peter McCarthy, DeAnn M. Dutton
2016, Scientific Investigations Report 2015-5019-F
The U.S. Geological Survey (USGS), in cooperation with the Montana Department of Natural Resources and Conservation, completed a study to update methods for estimating peak-flow frequencies at ungaged sites in Montana based on peak-flow data at streamflow-gaging stations through water year 2011. The methods allow estimation of peak-flow frequencies (that...
Montana StreamStats
2016, Scientific Investigations Report 2015-5019
About this volumeMontana StreamStats is a Web-based geographic information system (http://water.usgs.gov/osw/streamstats/) application that provides users with access to basin and streamflow characteristics for gaged and ungaged streams in Montana. Montana StreamStats was developed by the U.S. Geological Survey (USGS) in cooperation with the Montana Departments of Transportation, Environmental...
Streamflow characteristics based on data through water year 2009 for selected streamflow-gaging stations in or near Montana: Chapter E in Montana StreamStats
Peter McCarthy
2016, Scientific Investigations Report 2015-5019-E
Chapter E of this Scientific Investigations Report documents results from a study by the U.S. Geological Survey, in cooperation with the Montana Department of Environmental Quality and the Montana Department of Natural Resources and Conservation, to provide an update of statewide streamflow characteristics based on data through water year 2009...
Adjusted peak-flow frequency estimates for selected streamflow-gaging stations in or near Montana based on data through water year 2011: Chapter D in Montana StreamStats
Steven K. Sando, Roy Sando, Peter McCarthy, DeAnn M. Dutton
2016, Scientific Investigations Report 2015-5019-D
The climatic conditions of the specific time period during which peak-flow data were collected at a given streamflow-gaging station (hereinafter referred to as gaging station) can substantially affect how well the peak-flow frequency (hereinafter referred to as frequency) results represent long-term hydrologic conditions. Differences in the timing of the periods...
Montana StreamStats—A method for retrieving basin and streamflow characteristics in Montana: Chapter A in Montana StreamStats
Peter McCarthy, DeAnn M. Dutton, Steven K. Sando, Roy Sando
2016, Scientific Investigations Report 2015-5019-A
The U.S. Geological Survey (USGS) provides streamflow characteristics and other related information needed by water-resource managers to protect people and property from floods, plan and manage water-resource activities, and protect water quality. Streamflow characteristics provided by the USGS, such as peak-flow and low-flow frequencies for streamflow-gaging stations, are frequently used...
Hydrogeology and groundwater quality at monitoring wells installed for the Tunnel and Reservoir Plan System and nearby water-supply wells, Cook County, Illinois, 1995–2013
Robert T. Kay
2016, Scientific Investigations Report 2015-5186
Groundwater-quality data collected from 1995 through 2013 from 106 monitoring wells open to the base of the Silurian aquifer surrounding the Tunnel and Reservoir Plan (TARP) System in Cook County, Illinois, were analyzed by the U.S. Geological Survey, in cooperation with the Metropolitan Water Reclamation District of Greater Chicago, to...
Enriched groundwater seeps in two Vermont headwater catchments are hotspots of nitrate turnover
Amninder J. Kaur, Donald S. Ross, James B. Shanley, Anna R. Yatzor
2016, Wetlands (36) 237-249
Groundwater seeps in upland catchments are often enriched relative to stream waters, higher in pH, Ca2+ and sometimes NO3¯. These seeps could be a NO3¯ sink because of increased denitrification potential but may also be ‘hotspots’ for nitrification because of the relative enrichment. We compared seep soils with nearby well-drained...
Evaluating potential artefacts of photo-reversal on behavioral studies with nocturnal invasive sea lamprey (Petromyzon marinus)
Matthew Barnett, Istvan Imre, C. Michael Wagner, Richard T. Di Rocco, Nicholas S. Johnson, Grant E. Brown
2016, Canadian Journal of Zoology (94) 405-410
Sea lampreys (Petromyzon marinus L., 1758) are nocturnal, so experiments evaluating their behaviour to chemosensory cues have typically been conducted at night. However, given the brief timeframe each year that adult P. marinus are available for experimentation, we investigated whether P. marinus exposed to a 12 h shifted diurnal cycle (reversed photoperiod) could be tested...
Managing nutrients, water, and energy for producing more food with low pollution (MoFoLoPo); What would success look like?
Jill Baron
2016, Environmental Development (18) 52-53
Synthetic nitrogen (N) fertilizer has enabled modern agriculture to greatly improve human nutrition during the 20th century, but it has also created unintended human health and environmental pollution challenges for the 21st century. Averaged globally, about half of the fertilizer N applied to farms is removed with the crops, while...
Multi-laboratory survey of qPCR enterococci analysis method performance in U.S. coastal and inland surface waters
Richard A. Haugland, Shawn Siefring, Manju Varma, Kevin H. Oshima, Mano Sivaganesan, Yiping Cao, Meredith Raith, John Griffith, Stephen B. Weisberg, Rachel T. Noble, A. Denene Blackwood, Julie Kinzelman, Tamara Anan’eva, Rebecca N. Bushon, Erin A. Stelzer, Valarie J. Harwood, Katrina V. Gordon, Christopher Sinigalliano
2016, Journal of Microbiological Methods (123) 114-125
Quantitative polymerase chain reaction (qPCR) has become a frequently used technique for quantifying enterococci in recreational surface waters, but there are several methodological options. Here we evaluated how three method permutations, type of mastermix, sample extract dilution and use of controls in results calculation, affect method reliability among multiple laboratories...
Informing Lake Erie agriculture nutrient management via scenario evaluation
Donald Scavia, Margaret Kalcic, Rebecca Logsdon Muenich, Noel Aloysius, Jeffrey Arnold, Chelsie Boles, Remegio Confesor, Joseph DePinto, Marie Gildow, Jay Martin, Jennifer Read, Todd Redder, Dale M. Robertson, Scott P. Sowa, Yu-Chen Wang, Michael White, Haw Yen
2016, Report
Harmful algal blooms (HABs) have been increasing in extent and intensity in the western basin of Lake Erie. The cyanobacteria Microcystis produces toxins that pose serious threats to animal and human health, resulting in beach closures and impaired water supplies, and have even forced a “do not drink” advisory for...
The power of remote sensing: Global monitoring of weather, water, and crops with satellites and data integration
Gabriel B. Senay
2016, Resource: Engineering and Technology for a Sustainable World (23) 6-9
Imagine a family of six whose livelihood is based on subsistence farming on a small, maybe one hectare, parcel of land somewhere in Africa. The seasonal rainfall varies greatly, from 500 to 800 mm per year, and the land is degraded. Thus, the parcel’s total productivity is not more than...
