Sea-floor geology of Long Island Sound north of Duck Pond Point, New York
K. Y. McMullen, L. J. Poppe, W. W. Danforth, D.S. Blackwood, J. D. Schaer, K.A. Glomb, E. F. Doran
2012, Open-File Report 2011-1149
The U.S. Geological Survey, the National Oceanic and Atmospheric Administration (NOAA), and the Connecticut Department of Environmental Protection are mapping the sea floor in coastal areas of the northeastern United States. As part of the project, more than 100 square kilometers of multibeam-echosounder data, 23 sediment samples, bottom video, and...
Effectiveness of seining after electrofishing to characterize stream fish communities
Michael R. Meador
2012, North American Journal of Fisheries Management (32) 177-185
The richness and composition of species collected uniquely to electrofishing and subsequent seining efforts were examined at 271 stream sites across the USA by using wadeable electrofishing methods (backpack or barge electrofishing) or boat electrofishing followed by seining. Seining after wadeable electrofishing resulted in the collection of new species at...
Fish species of greatest conservation need in wadeable Iowa streams: current status and effectiveness of Aquatic Gap Program distribution models
Anthony R. Sindt, Clay Pierce, Michael C. Quist
2012, North American Journal of Fisheries Management (32) 135-146
Effective conservation of fish species of greatest conservation need (SGCN) requires an understanding of species–habitat relationships and distributional trends. Thus, modeling the distribution of fish species across large spatial scales may be a valuable tool for conservation planning. Our goals were to evaluate the status of 10 fish SGCN in...
Cross-borehole flow analysis to characterize fracture connections in the Melechov Granite, Bohemian-Moravian Highland, Czech Republic
Frederick L. Paillet, John H. Williams, Joseph Urik, Joseph Lukes, Miroslav Kobr, Stanislav Mares
2012, Hydrogeology Journal (20) 143-154
Application of the cross-borehole flow method, in which short pumping cycles in one borehole are used to induce time-transient flow in another borehole, demonstrated that a simple hydraulic model can characterize the fracture connections in the bedrock mass between the two boreholes. The analysis determines the properties of fracture connections...
On thinning of chains in MCMC
William A. Link, Mitchell J. Eaton
2012, Methods in Ecology and Evolution (3) 112-115
1. Markov chain Monte Carlo (MCMC) is a simulation technique that has revolutionised the analysis of ecological data, allowing the fitting of complex models in a Bayesian framework. Since 2001, there have been nearly 200 papers using MCMC in publications of the Ecological Society of America and the British Ecological...
Coastal circulation and potential coral-larval dispersal in Maunalua Bay, O'ahu, Hawaii—Measurements of waves, currents, temperature, and salinity, June-September 2010
M. Katherine Presto, Curt D. Storlazzi, Joshua B. Logan, Thomas E. Reiss, Kurt J. Rosenberger
2012, Open-File Report 2012-1040
This report presents a summary of fieldwork conducted in Maunalua Bay, O'ahu, Hawaii to address coral-larval dispersal and recruitment from June through September, 2010. The objectives of this study were to understand the temporal and spatial variations in currents, waves, tides, temperature, and salinity in Maunalua Bay during the summer...
Water-quality characteristics of Michigan's inland lakes, 2001-10
L. M. Fuller, C.K. Taricska
2012, Scientific Investigations Report 2011-5233
The U.S. Geological Survey and the Michigan Department of Environmental Quality (MDEQ) jointly monitored for selected water-quality constituents and properties of inland lakes during 2001–10 as part of Michigan's Lake Water-Quality Assessment program. During 2001–10, 866 lake basins from 729 inland lakes greater than 25 acres were monitored for baseline...
Quality of water in the White River and Lake Tapps, Pierce County, Washington, May-December 2010
S.S. Embrey, R. J. Wagner, R.L. Huffman, A. M. Vanderpool-Kimura, J.R. Foreman
2012, Scientific Investigations Report 2012-5022
The White River and Lake Tapps are part of a hydropower system completed in 1911–12. The system begins with a diversion dam on the White River that routes a portion of White River water into the southeastern end of Lake Tapps, which functioned as a storage reservoir for power generation....
Ensemble forecasting of potential habitat for three invasive fishes
Helen M. Poulos, Barry Chernoff, Pam L. Fuller, David Butman
2012, Aquatic Invasions (7) 59-72
Aquatic invasive species pose major ecological and economic threats to aquatic ecosystems worldwide via displacement, predation, or hybridization with native species and the alteration of aquatic habitats and hydrologic cycles. Modeling the habitat suitability of alien aquatic species through spatially explicit mapping is an increasingly important risk assessment tool. Habitat...
Evaluation of long-term water-level declines in basalt aquifers near Mosier, Oregon
Erick R. Burns, David S. Morgan, Karl K. Lee, Jonathan V. Haynes, Terrence D. Conlon
2012, Scientific Investigations Report 2012-5002
The Mosier area lies along the Columbia River in northwestern Wasco County between the cities of Hood River and The Dalles, Oregon. Major water uses in the area are irrigation, municipal supply for the city of Mosier, and domestic supply for rural residents. The primary source of water is groundwater...
Patterns of larval sucker emigration from the Sprague and lower Williamson Rivers of the Upper Klamath Basin, Oregon, after the removal of Chiloquin Dam - 2009-10 Annual Report
Craig M. Ellsworth, Barbara A. Martin
2012, Open-File Report 2012-1037
Executive Summary In 2009 and 2010, drift samples were collected from six sites on the lower Sprague and Williamson Rivers to assess drift patterns of larval Lost River suckers (Deltistes luxatus) (LRS) and shortnose suckers (Chasmistes brevirostris) (SNS). The objective of this study was to characterize the drift timing, relative abundance,...
Quality of water and bottom material in Breckenridge Reservoir, Virginia, September 2008 through August 2009
Russell Lotspeich
2012, Open-File Report 2011-1305
Breckenridge Reservoir is located within the U.S. Marine Corps Base in Quantico, which is in the Potomac River basin and the Piedmont Physiographic Province of northern Virginia. Because it serves as the principal water supply for the U.S. Marine Corps Base in Quantico, an assessment of the water-quality of Breckenridge...
Shipboard magnetic field "noise" reveals shallow heavy mineral sediment concentrations in Chesapeake Bay
Anjana K. Shah, Peter R. Vogt, Joseph G. Rosenbaum, Wayne L. Newell, Thomas M. Cronin, Debra A. Willard, Rick A. Hagen, John Brozena, Albert Hofstra
2012, Marine Geology (303-306) 26-41
Shipboard magnetic field data collected over Chesapeake Bay exhibit low-amplitude, short-wavelength anomalies that most likely indicate shallow concentrations of heavy mineral sediments. Piston core layers and black sand beach samples exhibit enhanced magnetic susceptibilities and carry remanent magnetization, with mineralogical analyses indicating ilmenite and trace magnetite and/or maghemite and hematite....
Spatially variable stage-driven groundwater-surface water interaction inferred from time-frequency analysis of distributed temperature sensing data
Kisa Mwakanyamale, Lee Slater, Frederick D. Day-Lewis, Mehrez Elwaseif, Carole D. Johnson
2012, Geophysical Research Letters (39)
Characterization of groundwater-surface water exchange is essential for improving understanding of contaminant transport between aquifers and rivers. Fiber-optic distributed temperature sensing (FODTS) provides rich spatiotemporal datasets for quantitative and qualitative analysis of groundwater-surface water exchange. We demonstrate how time-frequency analysis of FODTS and synchronous river stage time series from the...
GEM Basic Building Taxonomy (Version 1.0)
S. Brzev, C. Scawthorn, A.W. Charleson, K. Jaiswal
2012, Report
This report documents the development of Global Earthquake Model (GEM) Basic Building Taxonomy and it also provides version 1.0 of this Taxonomy for its immediate application within GEM Physical Risk projects. Criteria for development of the GEM Building Taxonomy required that the Taxonomy be relevant to seismic performance of different construction types; be...
Brain cancer mortality rates increase with Toxoplasma gondii seroprevalence in France
Marion Vittecoq, Eric Elguero, Kevin D. Lafferty, Benjamin Roche, Jacques Brodeur, Michel Gauthier-Clerc, Dorothee Misse, Frederic Thomas
2012, Infection, Genetics and Evolution (12) 496-498
The incidence of adult brain cancer was previously shown to be higher in countries where the parasite Toxoplasma gondii is common, suggesting that this brain protozoan could potentially increase the risk of tumor formation. Using countries as replicates has, however, several potential confounding factors, particularly because detection rates vary with...
Hood River PIT-tag interrogation system efficiency study. Annual report of U.S. Geological Survey activities: November 2010-October 2011
Ian G. Jezorek, Patrick J. Connolly
2012, Report
Introduction During summer 2010, an agreement was made between the US Geological SurveyColumbia River Research Laboratory (USGS-CRRL) and the Confederated Tribes of the Warm Springs (CTWS) to operate an experimental Passive Integrated Transponder (PIT)-tag interrogation system (PTIS) near the mouth of the Hood River for a year and provide fishdetection efficiency...
Applying additive modeling and gradient boosting to assess the effects of watershed and reach characteristics on riverine assemblages
Kelly O. Maloney, Matthias Schmid, Donald E. Weller
2012, Methods in Ecology and Evolution (3) 116-128
Issues with ecological data (e.g. non-normality of errors, nonlinear relationships and autocorrelation of variables) and modelling (e.g. overfitting, variable selection and prediction) complicate regression analyses in ecology. Flexible models, such as generalized additive models (GAMs), can address data issues, and machine learning techniques (e.g. gradient boosting) can help resolve modelling...
Radiocarbon ages of terrestrial gastropods extend duration of ice-free conditions at the Two Creeks forest bed, Wisconsin, USA
Jason A. Rech, Jeffrey C. Nekola, Jeffrey S. Pigati
2012, Quaternary Research (77) 289-292
Analysis of terrestrial gastropods that underlie the late Pleistocene Two Creeks forest bed (~ 13,800–13,500 cal yr BP) in eastern Wisconsin, USA provides evidence for a mixed tundra-taiga environment prior to formation of the taiga forest bed. Ten new AMS 14C analyses on terrestrial gastropod shells indicate the mixed tundra-taiga...
Grain-size segregation and levee formation in geophysical mass flows
C.G. Johnson, B. P. Kokelaar, Richard M. Iverson, M. Logan, R.G. LaHusen, J.M.N.T. Gray
2012, Journal of Geophysical Research (117)
Data from large-scale debris-flow experiments are combined with modeling of particle-size segregation to explain the formation of lateral levees enriched in coarse grains. The experimental flows consisted of 10 m3 of water-saturated sand and gravel, which traveled ∼80 m down a steeply inclined flume before forming an elongated leveed deposit 10 m...
Biological inventory of anchialine pools in the Pu'uhonua o Hōnaunau National Historical Park and Pu'ukoholā Heiau National Historical Site, Hawaii Island
Lori K. Tango, David Foote, Karl N. Magnacca, Sarah J. Foltz, Kerry Cutler
2012, Technical Report 181
Inventories for major groups of invertebrates were completed at anchialine pool complexes in Pu‘uhonua o Hōnaunau National Historical Park (PUHO) and Pu‘ukoholā Heiau National Historic Site (PUHE) on the island of Hawai‘i. Nine pools within two pool complexes were surveyed at PUHO, along with one extensive pool at the terminus...
Comparison of particle-tracking and lumped-parameter age-distribution models for evaluating vulnerability of production wells to contamination
S. M. Eberts, J.K. Böhlke, L. J. Kauffman, B.C. Jurgens
2012, Hydrogeology Journal (20) 263-282
Environmental age tracers have been used in various ways to help assess vulnerability of drinking-water production wells to contamination. The most appropriate approach will depend on the information that is available and that which is desired. To understand how the well will respond to changing nonpoint-source contaminant inputs at the...
AquaPathogen X--A template database for tracking field isolates of aquatic pathogens
Evi Emmenegger, Gael Kurath
2012, Fact Sheet 2012-3015
AquaPathogen X is a template database for recording information on individual isolates of aquatic pathogens and is available for download from the U.S. Geological Survey (USGS) Western Fisheries Research Center (WFRC) website (http://wfrc.usgs.gov). This template database can accommodate the nucleotide sequence data generated in molecular epidemiological studies along with the...
Surficial geologic map of the Norton-Manomet-Westport-Sconticut Neck 23-quadrangle area in southeast Massachusetts
Byron D. Stone, Janet Radway Stone, Mary L. DiGiacomo-Cohen, Kevin A. Kincare
2012, Open-File Report 2006-1260-F
The surficial geologic map shows the distribution of nonlithified earth materials at land surface in an area of 23 7.5-minute quadrangles (919 mi2 total) in southeastern Massachusetts. Across Massachusetts, these materials range from a few feet to more than 500 ft in thickness. They overlie bedrock, which crops out in...
Summary of chemical data from onsite and laboratory analyses of groundwater samples from the surficial aquifer, Las Vegas, Nevada, April and August 1993 and September 1994
Michael M. Reddy, Charmaine D. Gunther
2012, Open-File Report 2012-1029
This report presents a summary of data collected during April and August 1993 and September 1994. These results are to be used as a wet-site analog to southern Nevada soils located at the Amargosa Desert Research Site near Beatty, Nevada. The samples were collected and analyzed in conjunction with the...