Integrating growth and capture–mark–recapture models reveals size‐dependent survival in an elusive species
Jonathan P. Rose, Glenn D. Wylie, Michael L. Casazza, Brian J. Halstead
2018, Ecosphere (9) 1-18
Survival is a key vital rate for projecting the viability of wild populations. Estimating survival is difficult for many rare or elusive species because recapture rates of marked individuals are low, and the ultimate fate of individuals is unknown. Low recapture rates for many species have made it difficult to...
Multi-Resource Analysis—Methodology and synthesis
Karen E. Jenni, Emily Pindilli, Richard Bernknopf, Timothy L. Nieman, Carl Shapiro
2018, Circular 1442
This document introduces the Multi-Resource Analysis (MRA), a set of products that are being designed to integrate information on multiple natural resources in a region, combine that information with models of resource interrelationships and scenarios of change, and provide meaningful insights on the implications of those changes to people and the resources they value. The MRA...
An initial comparison of pesticides and amphibian pathogens between natural and created wetlands in the New Jersey Pinelands, 2014–16
Kelly L. Smalling, John F. Bunnell, Jonathan Cohl, Kristin M. Romanok, Lisa Hazard, Kirsten Monsen, Denise M. Akob, Angela M. Hansen, Michelle L. Hladik, Nicole Abdallah, Quratulain Ahmed, Araba Assan, Matthew D. De Parsia, Amaryl Griggs, Megan McWayne-Holmes, Naisargi Patel, Corey Sanders, Yesha Shrestha, Sean M. Stout, Brianna Williams
2018, Open-File Report 2018-1077
A study conducted by the U.S. Geological Survey, in cooperation with the New Jersey Pinelands Commission and Montclair State University, was designed to compare pesticide concentrations and the presence and prevalence of amphibian pathogens between natural ponds and two types of created wetlands, excavated ponds and stormwater basins, throughout the...
Hydrologic conditions and simulation of groundwater and surface water in the Great Dismal Swamp of Virginia and North Carolina
Jack R. Eggleston, Jeremy D. Decker, Jason S. Finkelstein, Frederic C. Wurster, Paul E. Misut, Luke P. Sturtevant, Gary K. Speiran
2018, Scientific Investigations Report 2018-5056
The U.S. Geological Survey (USGS), in cooperation with the U.S Fish and Wildlife Service, has investigated the hydrology of the Great Dismal Swamp (Swamp) National Wildlife Refuge (Refuge) in Virginia and North Carolina and developed a three-dimensional numerical model to simulate groundwater and surface-water hydrology. The model was developed with...
Evaluating relationships between native fishes and habitat in streams affected by oil and natural gas development
Carlin Girard, Annika W. Walters
2018, Fisheries Management and Ecology (25) 366-379
Oil and natural gas (ONG) development can affect aquatic ecosystems through water contamination, water withdrawals and disturbance of soil and vegetation (surface disturbance) from infrastructure development. Research on how these potential sources of watershed and aquatic ecosystem impairment can affect fish assemblages is limited. Fish–habitat relationships were evaluated across stream...
Modeling the Holocene slip history of the Wasatch fault (Utah): Coseismic and postseismic Coulomb stress changes and implications for paleoseismicity and seismic hazard
Meike Bagge, Hampel andrea, Ryan D. Gold
2018, GSA Bulletin (131) 43-57
The Wasatch fault zone defines the eastern boundary of the actively extending Basin and Range Province (Utah, western United States) and poses a significant seismic hazard to the metropolitan areas along the Wasatch Range. A wealth of paleoseismological data documents ∼24 surface-rupturing Mw ≥ 7 earthquakes along the Wasatch fault...
Assessment of undiscovered continuous oil resources of the East Gobi, Nyalga, Tamtsag-Hailar, Erlian, and Yingen basins of Mongolia and China, 2018
Christopher J. Schenk, Tracey J. Mercier, Janet K. Pitman, Thomas M. Finn, Cheryl A. Woodall, Kristen R. Marra, Phuong A. Le, Heidi M. Leathers-Miller
2018, Fact Sheet 2018-3040
Using a geology-based assessment methodology, the U.S. Geological Survey estimated undiscovered, technically recoverable mean continuous resources of 1.1 billion barrels of oil and 674 billion cubic feet of associated gas in the East Gobi, Nyalga, Tamtsag-Hailar, Erlian, and Yingen basins of Mongolia and China....
Assessment of undiscovered conventional oil resources of the East Gobi, Nyalga, Tamtsag-Hailar, Erlian, and Yingen basins of Mongolia and China, 2018
Christopher J. Schenk, Tracey J. Mercier, Janet K. Pitman, Thomas M. Finn, Cheryl A. Woodall, Kristen R. Marra, Phuong A. Le, Heidi M. Leathers-Miller
2018, Fact Sheet 2018-3041
Using a geology-based assessment methodology, the U.S. Geological Survey estimated undiscovered, technically recoverable mean conventional resources of 187 million barrels of oil and 85 billion cubic feet of gas in the East Gobi, Nyalga, Tamtsag-Hailar, Erlian, and Yingen basins of Mongolia and China....
Actinorhizal species influence plant and soil nitrogen status of semiarid shrub-dominated ecosystems in the western Great Basin, USA
Stephanie M. Freund, Fiona M. Soper, Simon R. Poulson, Paul C. Selmants, Benjamin W. Sullivan
2018, Journal of Arid Environments (157) 48-56
Actinorhizal plants form symbiotic root associations with dinitrogen (N2) fixing Frankia and are abundant in North American cold deserts. However, the extent to which actinorhizal species are actively fixing N2 or altering ecosystem nitrogen (N) availability remains unclear. We used the 15N natural abundance technique to measure how three widespread actinorhizal species in the western Great Basin...
Science alive and well in North American wildlife management
James D. Nichols, Fred A. Johnson, Byron K. Williams, G. Scott Boomer
2018, Science Advances
Artelle et al. (1) entitled a recent article with the provocative claim: “Hallmarks of science missing from North American wildlife management”. Although we agree with some of the concerns and recommendations of Artelle et al. (1), we believe that the article is misleading about the distinction between science and management,...
Insight into infectious hematopoietic necrosis virus (IHNV) in Chinese rainbow trout aquaculture from virus isolated from 7 provinces in 2010–2014
Peng Jia, Rachel B. Breyta, Qing Li, Xu Qian, Bing Wu, Wei Zheng, Zhiqing Wen, Ying Liu, Gael Kurath, Qunyi Hua, Ningyi Jin, Hong Liu
2018, Aquaculture (496) 239-246
The aquatic rhabdovirus infectious hematopoietic necrosis virus (IHNV) currently causes substantial fish losses in Chinese coldwater aquaculture. While IHNV was first reported in China in 1985 and has since undergone considerable spread, little is known about the underlying epidemiological patterns like introduction sources and transmission routes. In this study, we examined epidemiological and phylogenetic...
Evaluating long-term patterns of decreasing groundwater discharge through a lake-bottom permeable reactive barrier
Timothy D. McCobb, Martin A. Briggs, Denis R. LeBlanc, Frederick D. Day-Lewis, Carole D. Johnson
2018, Journal of Environmental Management (220) 233-245
Identifying and quantifying groundwater exchange is critical when considering contaminant fate and transport at the groundwater/surface-water interface. In this paper, areally distributed temperature and point seepage measurements are used to efficiently assess spatial and temporal groundwater discharge patterns through a glacial-kettle lakebed area containing a zero-valent iron permeable reactive barrier...
Responses of hatchery‐ and natural‐origin adult spring Chinook Salmon to a trap‐and‐haul reintroduction program
Tobias J. Kock, Russell W. Perry, Adam C. Pope, John D. Serl, Mike Kohn, Theresa L. Liedtke
2018, North American Journal of Fisheries Management (38) 1004-1016
The construction of impassable dams severely affected many Pacific salmon Oncorhynchus spp. populations, resulting in reintroduction efforts that are now focused on returning anadromous fish to areas located upstream of these dams. A primary strategy for moving adult salmon and steelhead O. mykiss around a dam or multiple dams involves trapping fish downstream and...
Flyway structure in the circumpolar greater white‐fronted goose
Robert E. Wilson, Craig R. Ely, Sandra L. Talbot
2018, Ecology and Evolution (8) 8490-8507
Dispersal and migratory behavior are influential factors in determining how genetic diversity is distributed across the landscape. In migratory species, genetic structure can be promoted via several mechanisms including fidelity to distinct migratory routes. Particularly within North America, waterfowl management units have been delineated according to distinct longitudinal migratory flyways...
Evaluating the waterfowl breeding population and habitat survey for scaup
Michael L. Schummer, Alan D. Afton, Shannon S. Badzinski, Scott A. Petrie, Glenn H. Olsen, Mark A. Mitchell
2018, Journal of Wildlife Management (82) 1252-1262
Potential bias in breeding population estimates of certain duck species from the Waterfowl Breeding Population and Habitat Survey (WBPHS) has been a concern for decades. The WBPHS does not differentiate between lesser (Aythya affinis) and greater (A. marila) scaup, but lesser scaup comprise 89% of the combined scaup population and their...
Deep fluid pathways beneath Mammoth Mountain, California, illuminated by migrating earthquake swarms
Alicia J. Hotovec-Ellis, David R. Shelly, David P. Hill, Andrew M. Pitt, Phillip B. Dawson, Bernard A. Chouet
2018, Science Advances (4) 1-7
Although most volcanic seismicity is shallow (within several kilometers of the surface), some volcanoes exhibit deeper seismicity (10 to 30+ km) that may reflect active processes such as magma resupply and volatile transfer. One such volcano is Mammoth Mountain, California, which has also recently exhibited high rates of CO2 discharge at...
Status of groundwater-level altitudes and long-term groundwater-level changes in the Chicot, Evangeline, and Jasper aquifers, Houston-Galveston region, Texas, 2018
Sachin D. Shah, Jason K. Ramage, Christopher L. Braun
2018, Scientific Investigations Report 2018-5101
Since the early 1900s, most of the groundwater withdrawals in the Houston-Galveston region, Texas, have been from the three primary aquifers that compose the Gulf Coast aquifer system—the Chicot, Evangeline, and Jasper aquifers. Withdrawals from these aquifers are used for municipal supply, industrial, and irrigation purposes. This report, prepared by...
An individual-based model for predicting dynamics of a newly established Mexican wolf (Canis lupus baileyi) population—Final report
Jay V. Gedir, James W. Cain III
2018, Open-File Report 2018-1126
Project SummaryThe Mexican wolf recovery team proposed to establish other populations of Mexican wolves (Canis lupus baileyi) in the Southwest (U.S. Fish and Wildlife Service, 1982). We were tasked to conduct an extensive simulation modeling exercise to determine release strategies (in conjunction with management actions) that best predict establishment...
Geology and geologic history: Overview of the geology of the San Francisco Bay region
Russell Graymer
A. Kenneth Johnson, Greg W. Bartow, editor(s)
2018, Book chapter, Geology of San Francisco, California; Geology of the cities of the world series
The geology of San Francisco and the surrounding northern and central California area has played a pivotal role in the development of our understanding of Earth processes, especially the process of tectonic accretion at a continental margin and the development of transform plate margins. The Franciscan Complex, which underlies...
Flow-mediated effects on travel time, routing, and survival of juvenile Chinook salmon in a spatially complex, tidally forced river delta
Russell W. Perry, Adam C. Pope, Jason G. Romine, Patricia L. Brandes, Jon R. Burau, Aaron R. Blake, Arnold J. Ammann, Cyril J. Michel
2018, Canadian Journal of Fisheries and Aquatic Sciences (75) 1886-1901
We evaluated the interacting influences of river flows and tides on travel time, routing, and survival of juvenile late-fall Chinook salmon (Oncorhynchus tshawytscha) migrating through the Sacramento–San Joaquin River Delta. To quantify these effects, we jointly modeled the travel time, survival, and migration routing in relation to individual time-varying covariates...
A review of Bayesian belief network models as decision-support tools for wetland conservation: Are water birds potential umbrella taxa?
Maggie P. MacPherson, Elisabeth B. Webb, Andy Raedeke, Doreen C. Mengel, Frank Nelson
2018, Biological Conservation (226) 215-223
Creative approaches to identifying umbrella species hold promise for devising effective surrogates of ecological communities or ecosystems. However, mechanistic niche models that predict range or habitat overlap among species may yet lack development. We reviewed literature on taxon-centered Bayesian belief network (BBN) models to explore a novel approach to identify...
Landsat Collections
U.S. Geological Survey
2018, Fact Sheet 2018-3049
In 2016, the U.S. Geological Survey reorganized the Landsat archive into a tiered collection structure, which ensures that Landsat Level-1 products provide a consistent archive of known data quality to support time-series analyses and data “stacking” while controlling continuous improvement of the archive and access to all data as they are...
Estimating distemper virus dynamics among wolves and grizzly bears using serology and Bayesian state‐space models
Paul C. Cross, Frank T. van Manen, Mafalda Viana, Emily S. Almberg, Daniel Bachen, Ellen E. Brandell, Mark A. Haroldson, Peter J. Hudson, Daniel R. Stahler, Douglas W. Smith
2018, Ecology and Evolution (8) 8726-8735
Many parasites infect multiple hosts, but estimating the transmission across host species remains a key challenge in disease ecology. We investigated the within and across host species dynamics of canine distemper virus (CDV) in grizzly bears (Ursus arctos) and wolves (Canis lupus) of the Greater Yellowstone Ecosystem (GYE). We hypothesized...
Flushing of the deep Pacific Ocean and the deglacial rise of atmospheric CO2 concentrations
Jianghui Du, Brian Haley, Alan Mix, Maureen Walczak, Summer K. Praetorius
2018, Nature Geoscience (11) 749-755
During the last deglaciation (19,000–9,000 years ago), atmospheric CO2increased by about 80 ppm. Understanding the mechanisms responsible for this change is a central theme of palaeoclimatology, relevant for predicting future CO2 transfers in a warming world. Deglacial CO2 rise hypothetically tapped an accumulated deep Pacific carbon reservoir, but the processes remain elusive...
Spatial relationships of levees and wetland systems within floodplains of the Wabash Basin, USA
Ryan R. Morrison, Erin N. Bray, Fernando Nardi, Antonio Annis, Quan Dong
2018, Journal of the American Water Resources Association (54) 934-948
Given the unique biogeochemical, physical, and hydrologic services provided by floodplain wetlands, proper management of river systems should include an understanding of how floodplain modifications influence wetland ecosystems. The construction of levees can reduce river–floodplain connectivity, yet it is unclear how levees affect wetlands within floodplains, let alone the cumulative impacts...