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AMModels: An R package for storing models, data, and metadata to facilitate adaptive management
Therese M. Donovan, Jonathan Katz
2018, PLoS ONE (13) 1-57
Agencies are increasingly called upon to implement their natural resource management programs within an adaptive management (AM) framework. This article provides the background and motivation for the R package, AMModels. AMModels was developed under R version 3.2.2. The overall goal of AMModels is simple: To codify knowledge in the form of models and...
Suspended-sediment transport from the Green-Duwamish River to the Lower Duwamish Waterway, Seattle, Washington, 2013–17
Craig A. Senter, Kathleen E. Conn, Robert W. Black, Norman Peterson, Ann M. Vanderpool-Kimura, James R. Foreman
2018, Open-File Report 2018-1029
The Green-Duwamish River transports watershed-derived sediment to the Lower Duwamish Waterway Superfund site near Seattle, Washington. Understanding the amount of sediment transported by the river is essential to the bed sediment cleanup process. Turbidity, discharge, suspended-sediment concentration (SSC), and particle-size data were collected by the U.S. Geological Survey (USGS)...
Regional climate response collaboratives: Multi-institutional support for climate resilience
Kristen Averyt, Justin D. Derner, Lisa Dilling, Rafael Guerrero, Linda A. Joyce, Shannon McNeeley, Elizabeth McNie, Jeffrey T. Morisette, Dennis Ojima, Robin O'Malley, Dannele Peck, Andrea J. Ray, Matt Reeves, William Travis
2018, Bulletin of the American Meteorological Society (99) 891-898
Federal investments by U.S. agencies to enhance climate resilience at regional scales grew over the past decade (2010s). To maximize efficiency and effectiveness in serving multiple sectors and scales, it has become critical to leverage existing agency-specific research, infrastructure, and capacity while avoiding redundancy. We discuss lessons learned from a...
Assessment of undiscovered continuous oil and gas resources in the Domanik-type formations of the Volga-Ural Region Province, Russia, 2017
Timothy R. Klett, Michael E. Brownfield, Thomas M. Finn, Stephanie B. Gaswirth, Phuong A. Le, Heidi M. Leathers-Miller, Kristen R. Marra, Tracey J. Mercier, Janet K. Pitman, Christopher J. Schenk, Marilyn E. Tennyson, Cheryl A. Woodall
2018, Fact Sheet 2017-3085
Using a geology-based assessment methodology, the U.S. Geological Survey estimated mean undiscovered, technically recoverable continuous resources of 2.8 billion barrels of oil and 34 trillion cubic feet of gas in the Domanik-type formations of the Volga-Ural Region Province, Russia....
Flood-inundation maps for Cedar Creek at 18th Street at Auburn, Indiana
Kathleen K. Fowler
2018, Scientific Investigations Report 2017-5156
Digital flood-inundation maps for a 1.9-mile reach of Cedar Creek at Auburn, Indiana (Ind.), from the First Street bridge, downstream to the streamgage at 18th Street, then ending approximately 1,100 feet (ft) downstream of the Baltimore and Ohio railroad, were created by the U.S. Geological Survey (USGS) in cooperation with...
U.S. Geological Survey - Virginia Department of Transportation: Bridge scour pilot study
Samuel H. Austin
2018, Fact Sheet 2018-3006
BackgroundCost effective and safe highway bridge designs are required to ensure the long-term sustainability of Virginia’s road systems. The streamflows that, over time, scour streambed sediments from bridge piers inherently affect bridge safety and design costs. To ensure safety, bridge design must anticipate streambed scour at bridge piers over the...
Calculation of voltages in electric power transmission lines during historic geomagnetic storms: An investigation using realistic earth impedances
Greg M. Lucas, Jeffrey J. Love, Anna Kelbert
2018, Space Weather (16) 185-195
Commonly, one-dimensional (1-D) Earth impedances have been used to calculate the voltages induced across electric power transmission lines during geomagnetic storms under the assumption that much of the three-dimensional structure of the Earth gets smoothed when integrating along power transmission lines. We calculate the voltage across power transmission lines in...
An analytical framework for estimating aquatic species density from environmental DNA
Thierry Chambert, David S. Pilliod, Caren S. Goldberg, Hideyuki Doi, Teruhiko Takahara
2018, Ecology and Evolution (8) 3468-3477
Environmental DNA (eDNA) analysis of water samples is on the brink of becoming a standard monitoring method for aquatic species. This method has improved detection rates over conventional survey methods and thus has demonstrated effectiveness for estimation of site occupancy and species distribution. The frontier of eDNA applications, however, is...
A flatfile of ground motion intensity measurements from induced earthquakes in Oklahoma and Kansas
Steven B. Rennolet, Morgan P. Moschetti, Eric M. Thompson, William L. Yeck
2018, Earthquake Spectra (34) 1-20
We have produced a uniformly processed database of orientation-independent (RotD50, RotD100) ground motion intensity measurements containing peak horizontal ground motions (accelerations and velocities) and 5-percent-damped pseudospectral accelerations (0.1–10 s) from more than 3,800 M ≥ 3 earthquakes in Oklahoma and Kansas that occurred between January 2009 and December 2016. Ground motion time...
The 2013–2016 induced earthquakes in Harper and Sumner Counties, southern Kansas
Justin L. Rubinstein, William L. Ellsworth, Sara L. Dougherty
2018, Bulletin of the Seismological Society of America (108) 674-689
We examine the first four years (2013–2016) of the ongoing seismicity in southern Kansas using high‐precision locations derived from a local seismometer network. The earthquakes occur almost exclusively in the shallow crystalline basement, below the wastewater injection horizon of the Arbuckle Group at the base of the sedimentary section. Multiple...
Surrounding land cover types as predictors of palustrine wetland vegetation quality in conterminous USA
Martin A. Stapanian, Brian Gara, William Schumacher
2018, Science of the Total Environment (619-620) 366-375
The loss of wetland habitats and their often-unique biological communities is a major environmental concern. We examined vegetation data obtained from 380 wetlands sampled in a statistical survey of wetlands in the USA. Our goal was to identify which surrounding land cover types best predict two indices of vegetation quality...
Effects of the proposed California WaterFix North Delta Diversion on flow reversals and entrainment of juvenile Chinook salmon (Oncorhynchus tshawytscha) into Georgiana Slough and the Delta Cross Channel, northern California
Russell W. Perry, Jason G. Romine, Adam C. Pope, Scott D. Evans
2018, Open-File Report 2018-1028
The California Department of Water Resources and Bureau of Reclamation propose new water intake facilities on the Sacramento River in northern California that would convey some of the water for export to areas south of the Sacramento-San Joaquin River Delta (hereinafter referred to as the Delta) through tunnels rather...
Automated remote cameras for monitoring alluvial sandbars on the Colorado River in Grand Canyon, Arizona
Paul E. Grams, Robert B. Tusso, Daniel D. Buscombe
2018, Open-File Report 2018-1019
Automated camera systems deployed at 43 remote locations along the Colorado River corridor in Grand Canyon National Park, Arizona, are used to document sandbar erosion and deposition that are associated with the operations of Glen Canyon Dam. The camera systems, which can operate independently for a year or more, consist...
Determination of δ13C, δ15N, or δ34S by isotope-ratio-monitoring mass spectrometry using an elemental analyzer
Craig A. Johnson, Craig A. Stricker, Cayce A. Gulbransen, Matthew P. Emmons
2018, Techniques and Methods 5-D4
This report describes procedures used in the Geology, Geophysics, and Geochemistry Science Center of the U.S. Geological Survey in Denver, Colorado, to determine the stable-isotope ratios 13C/12C, 15N/14N, and 34S/32S in solid materials. The procedures use elemental analyzers connected directly to gas-source isotope-ratio mass spectrometers. A different elemental–analyzer–mass-spectrometer system is...
Neoproterozoic–early Paleozoic provenance evolution of sedimentary rocks in and adjacent to the Farewell terrane (interior Alaska)
Julie A. Dumoulin, James V. Jones III, Dwight Bradley, Alison B. Till, Stephen E. Box, Paul B. O’Sullivan
2018, Geosphere (14) 367-394
New detrital zircon U-Pb data from the Farewell terrane of interior Alaska illuminate its early provenance evolution and connections with other Alaskan terranes. Five samples come from Neoproterozoic units in the central Farewell terrane. Basal “ferruginous beds” and the overlying Windy Fork Formation have prominent detrital zircon age populations between...
Spatially distributed groundwater recharge estimated using a water-budget model for the Island of Maui, Hawai`i, 1978–2007
Adam G. Johnson, John A. Engott, Maoya Bassiouni, Kolja Rotzoll
2018, Scientific Investigations Report 2014-5168
Demand for freshwater on the Island of Maui is expected to grow. To evaluate the availability of fresh groundwater, estimates of groundwater recharge are needed. A water-budget model with a daily computation interval was developed and used to estimate the spatial distribution of recharge on Maui for average climate conditions...
Temporal shift of sea turtle nest sites in an eroding barrier island beach
Ikuko Fujisaki, Margaret M. Lamont, Raymond R. Carthy
2018, Ocean and Coastal Management (155) 24-29
Shoreline changes affect functionality of a sandy beach as a wildlife habitat and coastal erosion is among the primary causes of the changes. We examined temporal shifts in locations where loggerheads placed nests in relation to coastal erosion along a barrier island beach in the northern Gulf of Mexico. We...
A simplified field protocol for genetic sampling of birds using buccal swabs
Julia T. Vilstrup, Thomas D. Mullins, Mark P. Miller, Will McDearman, Jeffrey R. Walters, Susan M. Haig
2018, Wilson Journal of Ornithology (130) 326-334
DNA sampling is an essential prerequisite for conducting population genetic studies. For many years, blood sampling has been the preferred method for obtaining DNA in birds because of their nucleated red blood cells. Nonetheless, use of buccal swabs has been gaining favor because they are less invasive yet still yield...
Effect of cattle exclosures on Columbia Spotted Frog abundance
M. J. Adams, Christopher Pearl, Thierry Chambert, Brome McCreary, Stephanie Galvan, Jennifer Rowe
2018, Wetlands Ecology and Management (26) 627-634
Livestock grazing is an important land use in the western USA and can have positive or negative effects on amphibians. Columbia Spotted Frog (Rana luteiventris) often use ponds that provide water for cattle. We conducted a long-term manipulative study on US Forest Service land in northeastern Oregon to...
Rayleigh and S wave tomography constraints on subduction termination and lithospheric foundering in central California
Chengxin Jiang, Brandon Schmandt, Steven M. Hansen, Sara L. Dougherty, Robert W. Clayton, Jamie Farrell, Fan-Chi Lin
2018, Earth and Planetary Science Letters (488) 14-26
The crust and upper mantle structure of central California have been modified by subduction termination, growth of the San Andreas plate boundary fault system, and small-scale upper mantle convection since the early Miocene. Here we investigate the contributions of these processes to the creation of the Isabella Anomaly, which is...
Assessment of distribution and abundance estimates for Mariana swiftlets (Aerodramus bartschi) via examination of survey methods
Nathan C. Johnson, Susan M. Haig, Stephen M. Mosher
2018, Wilson Journal of Ornithology (130) 23-29
We described past and present distribution and abundance data to evaluate the status of the endangered Mariana Swiftlet (Aerodramus bartschi), a little-known echolocating cave swiftlet that currently inhabits 3 of 5 formerly occupied islands in the Mariana archipelago. We then evaluated the survey methods used to attain these estimates via...
Rare long-distance dispersal of the Island Night Lizard, Xantusia riversiana, maintains high diversity in a fragmented environment
Ryan P. O’Donnell, Charles A. Drost, Gary M. Fellers, Benjamin A. Crabb, Karen E. Mock
2018, Conservation Genetics (19) 803-814
The Island Night Lizard (Xantusia riversiana) is endemic to three of the Channel Islands off the coast of California, USA. Introduced species such as goats, sheep, and cats have profoundly affected the fauna and flora of the islands for over 150 years, but most of these non-native species have been...
Occurrence of Batrachochytrium dendrobatidis in anurans of the Mediterranean region of Baja California, México
Anny Peralta-Garcia, Andrea J. Adams, Cheryl J. Briggs, Patricia Galina-Tessaro, Jorge H. Valdez-Villavicencio, Bradford Hollingsworth, H. Bradley Shaffer, Robert N. Fisher
2018, Diseases of Aquatic Organisms (127) 193-200
 Chytridiomycosis is caused by the fungal pathogen Batrachochytrium dendrobatidis (Bd) and is regarded as one of the most significant threats to global amphibian populations. In México, Bd was first reported in 2003 and has now been documented in 13 states. We visited 33 localities and swabbed 199 wild-caught anurans from...
Enhanced invertebrate prey production following estuarine restoration supports foraging for multiple species of juvenile salmonids (Oncorhynchus spp.)
Isa Woo, Melanie J. Davis, Christopher S. Ellings, Glynnis Nakai, John Y. Takekawa, Susan E.W. De La Cruz
2018, Restoration Ecology (26) 964-975
Estuaries provide crucial foraging resources and nursery habitat for threatened populations of anadromous salmon. As such, there has been a global undertaking to restore habitat and tidal processes in modified estuaries. The foraging capacity of these ecosystems to support various species of out-migrating juvenile salmon can be quantified by monitoring...
Waterbird habitat in California's Central Valley basins under climate, urbanization, and water management scenarios
Elliott Matchett, Joseph P. Fleskes
2018, Journal of Fish and Wildlife Management (9) 75-94
California's Central Valley provides critical, but threatened habitat and food resources for migrating and wintering waterfowl, shorebirds, and other waterbirds. The Central Valley is comprised of nine basins that were defined by the Central Valley Joint Venture (CVJV) to assist in conservation planning. Basins vary in composition and extent of...