Quantitative evaluation of vitrinite reflectance and atomic O/C in coal using Raman spectroscopy and multivariate analysis
Jason S. Lupoi, Luke P Fritz, Paul C. Hackley, Logan Solotky, Amy Weislogel, Steve Schlaegle
2018, Fuel (230) 1-8
Vitrinite reflectance (VRo) is a standard petrographic method for assessing thermal maturity (rank) of coal. The vitrinite reflectance technique, however, requires significant petrographic experience, can be time-consuming, and may be biased by analyst subjectivity. Correlations between coal rank and Raman spectral...
Development and characterization of 12 polymorphic microsatellite loci in the sea sandwort, Honckenya peploides
Megan C. Gravley, George K. Sage, Sandra L. Talbot, Matthew L. Carlson
2018, Journal of Plant Research (131) 879-885
Codominant marker systems are better suited to analyze population structure and assess the source of an individual in admixture analyses. Currently, there is no codominant marker system using microsatellites developed for the sea sandwort, Honckenya peploides (L.) Ehrh., an early colonizer in island systems. We developed and characterized...
Estimates of long-term mean-annual nutrient loads considered for use in SPARROW models of the Midcontinental region of Canada and the United States, 2002 base year
David A. Saad, Glenn A. Benoy, Dale M. Robertson
2018, Scientific Investigations Report 2018-5051
Streamflow and nutrient concentration data needed to compute nitrogen and phosphorus loads were compiled from Federal, State, Provincial, and local agency databases and also from selected university databases. The nitrogen and phosphorus loads are necessary inputs to Spatially Referenced Regressions on Watershed Attributes (SPARROW) models. SPARROW models are a way...
Hydraulic, water-quality, and temperature performance of three types of permeable pavement under high sediment loading conditions
William R. Selbig, Nicolas Buer
2018, Scientific Investigations Report 2018-5037
Three permeable pavement surfaces - asphalt (PA), concrete (PC), and interlocking pavers (PIP) - were evaluated side-by-side to measure changes to the infiltrative capacity and water quality of stormwater runoff originating from a conventional asphalt parking lot in Madison, Wisconsin. During the 24-month monitoring period (2014-16), all three permeable pavements...
Measuring and evaluating ecological flows from streams to regions: Steps towards national coverage
James E. McKenna Jr., Howard W. Reeves, Paul Seelbach
2018, Freshwater Biology (63) 874-890
Living aquatic communities are largely determined and maintained by the volume and quality of flowing waters, both within lotic systems and in receiving waters of coastal systems. However, flow is one of the most frequently and extensively altered features of rivers and streams; alteration effects are likely to be...
Effects of the proposed California WaterFix North Delta Diversion on survival of juvenile Chinook salmon (Oncorhynchus tshawytscha) in the Sacramento-San Joaquin River Delta, northern California
Russell W. Perry, Adam C. Pope
2018, Open-File Report 2018-1078
The California Department of Water Resources and Bureau of Reclamation propose new water intake facilities on the Sacramento River in northern California that would convey some of the water for export to areas south of the Sacramento-San Joaquin River Delta (hereinafter referred to as the Delta) through tunnels rather...
Groundwater-quality data from the eastern Snake River Plain Aquifer, Jerome and Gooding Counties, south-central Idaho, 2017
Kenneth D. Skinner
2018, Data Series 1085
Groundwater-quality samples and water-level data were collected from 36 wells in the Jerome/Gooding County area of the eastern Snake River Plain aquifer during June 2017. The wells included 30 wells sampled for the U.S. Geological Survey’s National Water-Quality Assessment project, plus an additional 6 wells were selected to increase...
Examining speed versus selection in connectivity models using elk migration as an example
Angela Brennan, Ephraim M. Hanks, Jerod Merkle, Eric K. Cole, Sarah Dewey, Alyson B. Courtemanch, Paul C. Cross
2018, Landscape Ecology (33) 955-968
ContextLandscape resistance is vital to connectivity modeling and frequently derived from resource selection functions (RSFs). RSFs estimate relative probability of use and tend to focus on understanding habitat preferences during slow, routine animal movements (e.g., foraging). Dispersal and migration, however, can produce rarer, faster movements,...
Landowner and practitioner perspectives on private land conservation programs
Michelle L. Lute, Caitlyn R. Gillespie, Joseph J. Fontaine, Dustin R. Martin
2018, Society & Natural Resources: An International Journal (31) 218-231
Efforts to reverse declines in native grasslands benefit from agricultural policies that encourage private land conservation. The U.S. Department of Agriculture’s Conservation Reserve Program (CRP) improved conservation across landscapes but enrollment has declined. We used sequential exploratory mixed methods to compare landowner and conservation practitioners’ perceptions, evaluate perceived benefits, and...
Mainshock-aftershock clustering in volcanic regions
Ricardo Garza Giron, Emily E. Brodsky, Stephanie Prejean
2018, Geophysical Research Letters (45) 1370-1378
Earthquakes break their general Poissonean behavior through two types of seismic bursts: swarms and mainshock-aftershock sequences. The former is commonly thought to dominate in volcanic and geothermal regions, but aftershock production, including within swarms, is not well studied in volcanic regions. Here we compare mainshock-aftershock clustering in active volcanic regions in...
A comparison of photograph-interpreted and IfSAR-derived maps of polar bear denning habitat for the 1002 Area of the Arctic National Wildlife Refuge, Alaska
George M. Durner, Todd C. Atwood
2018, Open-File Report 2018-1083
Polar bears (Ursus maritimus) in Alaska use the Arctic National Wildlife Refuge (ANWR) for maternal denning. Pregnant bears den in snow banks for more than 3 months in winter during which they give birth to and nurture young. Denning is one of the most vulnerable times in polar bear...
U.S. Geological Survey science for the Wyoming Landscape Conservation Initiative—2016 annual report
Zachary H. Bowen, Ellen Aikens, Cameron L. Aldridge, Patrick J. Anderson, Timothy J. Assal, Anna D. Chalfoun, Geneva W. Chong, Cheryl A. Eddy-Miller, Steven L. Garman, Steve Germaine, Collin G. Homer, Aaron N. Johnston, Matthew J. Kauffman, Daniel J. Manier, Cynthia P. Melcher, Kirk A. Miller, Annika W. Walters, Jerrod D. Wheeler, Daniel J. Wieferich, Anna B. Wilson, Teal B. Wyckoff, Linda Zeigenfuss
2018, Open-File Report 2018-1048
This is the ninth annual report highlighting U.S. Geological Survey (USGS) science and decision-support activities conducted for the Wyoming Landscape Conservation Initiative (WLCI). The activities address specific management needs identified by WLCI partner agencies. In fiscal year (FY) 2016, there were 26 active USGS WLCI science-based projects. Of these 26...
The complete mitochondrial genome of Hine’s emerald dragonfly (Somatochlora hineana Williamson) via NGS sequencing
Craig Jackson, S. Grace McCalla, Jon Amberg, Daniel Soluk, Hugh Britten
2018, Mitochondrial DNA Part B (3) 562-563
Here, we report the complete mitochondrial genome of the endangered Hine’s emerald dragonfly (HED), Somatochlora hineana Williamson. Data were generated via next generation sequencing (NGS) and assembled using a mitochondrial baiting and iterative mapping approach. The full length circular genome is 15,705 bp with 26.6% GC content. It contains the typical metazoan set...
Flood-inundation maps for the Wabash River at Lafayette, Indiana
Moon H. Kim
2018, Scientific Investigations Report 2018-5017
Digital flood-inundation maps for an approximately 4.8-mile reach of the Wabash River at Lafayette, Indiana (Ind.) were created by the U.S. Geological Survey (USGS) in cooperation with the Indiana Office of Community and Rural Affairs. The inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science web...
An initial validation of Landsat 5 and 7 derived surface water temperature for U.S. lakes, reservoirs, and estuaries
Blake A. Schaeffer, John Iiames, John L. Dwyer, Erin Urquhart, Wilson Salls, Jennifer Rover, Bridget Seegers
2018, International Journal of Remote Sensing (39) 7789-7805
The United States Harmful Algal Bloom and Hypoxia Research Control Act of 2014 identified the need for forecasting and monitoring harmful algal blooms (HAB) in lakes, reservoirs, and estuaries across the nation. Temperature is a driver in HAB forecasting models that affects both HAB growth rates and toxin production. Therefore,...
Phosphorus speciation and solubility in aeolian dust deposited in the interior American West
Zhuojun Zhang, Harland L. Goldstein, Richard L. Reynolds, Yongfeng Hu, Xiaoming Wang, Mengqiang Zhu
2018, Environmental Science & Technology (52) 2658-2667
Aeolian dust is a significant source of phosphorus (P) to alpine oligotrophic lakes, but P speciation in dust and source sediments and its release kinetics to lake water remain unknown. Phosphorus K-edge XANES spectroscopy shows that calcium-bound P (Ca−P) is dominant in 10 of 12 dust samples (41−74%) deposited on...
Stream permanence is related to crayfish occupancy and abundance in the Ozark Highlands, USA
Allyson N. Yarra, Daniel D. Magoulick
2018, Freshwater Science (37) 54-63
Crayfish use of intermittent streams is especially important to understand in the face of global climate change. We examined the influence of stream permanence and local habitat on crayfish occupancy and species densities in the Ozark Highlands, USA. We sampled in June and July 2014 and 2015. We used a...
Integrated analysis for population estimation, management impact evaluation, and decision-making for a declining species
Brian A. Crawford, Clinton T. Moore, Terry M. Norton, John C. Maerz
2018, Biological Conservation (222) 33-43
A challenge for making conservation decisions is predicting how wildlife populations respond to multiple, concurrent threats and potential management strategies, usually under substantial uncertainty. Integrated modeling approaches can improve estimation of demographic rates necessary for making predictions, even for rare or cryptic species with sparse data, but their use in...
Capture efficiency and injury rates of band-tailed pigeons using whoosh nets
Christopher L. Coxen, Daniel P. Collins, Scott A. Carleton
2018, Wilson Journal of Ornithology (130) 321-326
Catching ground feeding birds has typically been accomplished through small, walk-in funnel-style traps. This approach is limited because it requires a bird to find its way into the trap, is biased toward less wary birds, and does not allow targeted trapping of individual birds. As part of a large study...
Methods for peak-flow frequency analysis and reporting for streamgages in or near Montana based on data through water year 2015
Steven K. Sando, Peter M. McCarthy
2018, Scientific Investigations Report 2018-5046
This report documents the methods for peak-flow frequency (hereinafter “frequency”) analysis and reporting for streamgages in and near Montana following implementation of the Bulletin 17C guidelines. The methods are used to provide estimates of peak-flow quantiles for 50-, 42.9-, 20-, 10-, 4-, 2-, 1-, 0.5-, and 0.2-percent annual exceedance probabilities...
Use of non-invasive genetics to generate core-area population estimates of a threatened predator in the Superior National Forest, USA
Shannon Barber-Meyer, Daniel Ryan, David Grosshuesch, Timothy Catton, Sarah Malick-Wahls
2018, Canadian Wildlife Biology and Management (7) 46-55
Canada lynx (Lynx canadensis) are found in boreal forests of Canada and Alaska and range southward into the contiguous United States. Much less is understood about lynx in their southern range compared to northern populations. Because lynx are currently listed as threatened under the US Endangered Species Act but have...
Seismicity in the Challis, Idaho region, January 2014 - May 2017: Late aftershocks of the 1983 Ms 7.3 Borah Peak earthquake
Guanning Pang, Keith D. Koper, Michael C. Stickney, James C. Pechmann, Relu Burlacu, Kristine L. Pankow, Suzette Payne, Harley M. Benz
2018, Seismological Research Letters (89) 1366-1378
In April 2014, after about 20 yrs of relatively low seismicity, an energetic earthquake sequence (maximum ML">ML 4.8) began 25–30 km northwest of the 1983 Ms"><span...
Incorporating road crossing data into vehicle collision risk models for moose (Alces americanus) in Massachusetts, USA
Katherine Zeller, David Wattles, Stephen Destefano
2018, Environmental Management (62) 518-528
Wildlife–vehicle collisions are a human safety issue and may negatively impact wildlife populations. Most wildlife–vehicle collision studies predict high-risk road segments using only collision data. However, these data lack biologically relevant information such as wildlife population densities and successful road-crossing locations. We overcome this shortcoming with a new method that...
Use of imaging spectroscopy and LIDAR to characterize fuels for fire behavior prediction
E. Natasha Stavros, Janice Coen, Birgit Peterson, Harshvardhan Singh, Kama Kennedy, Carlos Ramirez, David Schimel
2018, Remote Sensing Applications: Society and Environment (11) 41-50
To protect ecosystem services and the increasing wildland urban interface in a world with fire, comprehensive maps of wildland fuels are needed to predict fire behavior and effects. Traditionally, fuels have been categorized into a classification scheme whereby a single metric represents vegetation composition and structure, which can then be parameterized based...
Ecological genomics predicts climate vulnerability in an endangered southwestern songbird
Kristin Ruegg, Rachael A. Bay, Eric C. Anderson, James F. Saracco, Ryan J. Harrigan, Mary J. Whitfield, Eben H. Paxton, Thomas B. Smith
2018, Ecology Letters (21) 1085-1096
Few regions have been more severely impacted by climate change in the USA than the Desert Southwest. Here, we use ecological genomics to assess the potential for adaptation to rising global temperatures in a widespread songbird, the willow flycatcher (Empidonax traillii), and find the endangered desert southwestern subspecies (E. t....