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Publication Extents

Not all publications have extents, not all extents are completely accurate
Celebrating ten years of collaboration
W. Matthew Cushing
2017, GEOSUR Newsletter (4) 4-5
Since the GEOSUR Program launched in 2007, the U.S. Geological Survey (USGS) Earth Resources Observation and Science (EROS) Center has had the honor of collaborating with CAF, PAIGH, and others supporting the Latin America GEOSUR Program. The catalyst for starting the program was the convergence of regional geospatial activities USGS,...
Lichens and microfungi in biocrusts: Structure and function now and in the future
Jayne Belnap, Otto L. Lange
J. Dighton, James F. White, editor(s)
2017, Book chapter, The fungal community
Biological soil crusts (biocrusts) are formed by soil-surface communities of biota that live within, or immediately on top of, the uppermost millimeters of soil. They consist of cyanobacteria, algae, mosses, microfungi, and lichenized fungi (hereafter, lichens). Cyanobacterial and microfungal filaments, rhizinae and rhizomorphs of lichens, and rhizinae and protonemata of...
Retrospective analysis of seasonal ocean growth rates of two sea winter Atlantic Salmon in eastern Maine using historic scales
Lisa K. Izzo, Joseph D. Zydlewski
2017, Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science (9) 357-372
Substantial declines of anadromous Atlantic Salmon Salmo salar have occurred throughout its range, with many populations at the southern extent of the distribution currently extirpated or endangered. While both one sea winter (1SW) and two sea winter (2SW) spawner numbers for the North American stocks have declined since the 1950s, the decline...
Mercury correlates with altered corticosterone but not testosterone or estradiol concentrations in common loons
Melinda D. Franceshini, David C. Evers, Kevin P. Kenow, Michael W. Meyer, Mark Pokras, L. Michael Romero
2017, Ecotoxicology and Environmental Safety (142) 348-354
We investigated the relation between environmental mercury exposure and corticosterone concentrations in free-living adult common loons (Gavia immer). We determined blood and feather mercury concentrations and compared them to testosterone, estradiol, and stress-induced plasma corticosterone concentrations. Although neither testosterone nor estradiol correlated with Hg levels, there was a robust positive...
The Florida manatee (Trichechus manatus latirostris) immunoglobulin heavy chain suggests the importance of clan III variable segments in repertoire diversity
Breanna Breaux, Thaddeus C. Deiss, Patricia L. Chen, Maria Paula Cruz-Schneider, Leonardo Sena, Margaret E. Hunter, Robert K. Bonde, Michael F. Criscitiello
2017, Developmental and Comparative Immunology (72) 57-68
Manatees are a vulnerable, charismatic sentinel species from the evolutionarily divergent Afrotheria. Manatee health and resistance to infectious disease is of great concern to conservation groups, but little is known about their immune system. To develop manatee-specific tools for monitoring health, we first must have a general knowledge of how...
Winter habitat associations of eastern spotted skunks in Virginia
Emily D. Thorne, Charles Waggy, David S. Jachowski, Marcella J. Kelly, W. Mark Ford
2017, Journal of Wildlife Management (81) 1042-1050
Eastern spotted skunk (Spilogale putorius) populations have declined throughout much of their range in the eastern United States over recent decades. Declines have been attributed to habitat loss or change, increased competition with sympatric mesocarnivore species, or disease. To better understand the extant distribution of spotted skunks in the Appalachian...
Piscivore diet response to a collapse in pelagic prey populations
Steven Zeug, Frederick V. Feyrer, Annie Brodsky, Jenny Melgo
2017, Environmental Biology of Fishes (100) 947-958
Pelagic fish populations in the upper San Francisco Estuary have experienced significant declines since the turn of the century; a pattern known as the pelagic organism decline (POD). This study investigated food habits of piscivorous fishes over two consecutive fall seasons following the decline of pelagic fish prey. Specifically, this...
Variation and plasticity and their interaction with urbanization in Guadalupe Bass populations on and off the Edwards Plateau
Jessica E. Pease, Timothy B. Grabowski, Allison A. Pease
2017, Report
The Colorado River Basin in Texas has experienced major alterations to its hydrologic regime due to changing land and water use patterns. These anthropogenic influences on hydrologic variability have had major implications for riparian and aquatic ecosystems and the species dependent upon them. However, impacts are often assessed at a...
Paltry past-precipitation: Predisposing prairie dogs to plague?
David Eads, Dean E. Biggins
2017, Journal of Wildlife Management (81) 990-998
The plague bacterium Yersinia pestis was introduced to California in 1900 and spread rapidly as a sylvatic disease of mammalian hosts and flea vectors, invading the Great Plains in the United States by the 1930s to 1940s. In grassland ecosystems, plague causes periodic, devastating epizootics in colonies of black-tailed prairie dogs (Cynomys...
Parental care mitigates carry-over effects of poor early conditions on offspring growth
Sonya K. Auer, Thomas E. Martin
2017, Behavioral Ecology (28) 1176-1182
Poor developmental conditions can have long-lasting negative effects on offspring phenotypes, but impacts often differ among species. Contrasting responses may reflect disparities in experimental protocols among single-species studies or inherent differences among species in their sensitivity to early conditions and/or ability to mitigate negative impacts. We used a common experimental...
Managed aquifer recharge through off-season irrigation in agricultural regions
Richard G. Niswonger, Eric D. Morway, Enrique Triana, Justin L. Huntington
2017, Water Resources Research (53) 6970-6992
Options for increasing reservoir storage in developed regions are limited and prohibitively expensive. Projected increases in demand call for new long-term water storage to help sustain agriculture, municipalities, industry, and ecological services. Managed aquifer recharge (MAR) is becoming an integral component of water resources around the world. However, MAR faces...
Mapping tree density in forests of the southwestern USA using Landsat 8 data
Kamal Humagain, Carlos Portillo-Quintero, Robert D. Cox, James W. Cain III
2017, Forests (8) 1-15
The increase of tree density in forests of the American Southwest promotes extreme fire events, understory biodiversity losses, and degraded habitat conditions for many wildlife species. To ameliorate these changes, managers and scientists have begun planning treatments aimed at reducing fuels and increasing understory biodiversity. However, spatial variability in tree...
Balancing lake ecological condition and agriculture irrigation needs in the Mississippi Alluvial Valley
Leandro E. Miranda, A.R. Omer, K.J. Killgore
2017, Agriculture, Ecosystems and Environment (246) 354-360
The Mississippi Alluvial Valley includes hundreds of floodplain lakes that support unique fish assemblages and high biodiversity. Irrigation practices in the valley have lowered the water table, increasing the cost of pumping water, and necessitating the use of floodplain lakes as a source of...
Connecting crustal seismicity and earthquake-driven stress evolution in Southern California
Frederick Pollitz, Camilla Cattania
2017, Journal of Geophysical Research B: Solid Earth (122) 6473-6490
Tectonic stress in the crust evolves during a seismic cycle, with slow stress accumulation over interseismic periods, episodic stress steps at the time of earthquakes, and transient stress readjustment during a postseismic period that may last months to years. Static stress transfer to surrounding faults has been well documented to...
Study of responses of 64-story Rincon Building to Napa, Fremont, Piedmont, San Ramon earthquakes and ambient motions
Mehmet Çelebi, John Hooper, Ron Klemencic
2017, Earthquake Spectra (33) 1125-1148
We analyze the recorded responses of a 64-story, instrumented, concrete core shear wall building in San Francisco, California, equipped with tuned sloshing liquid dampers (TSDs) and buckling restraining braces (BRBs). Previously, only ambient data from the 72-channel array in the building were studied (Çelebi et al. 2013). Recently,...
Suitability of oyster restoration sites along the Louisiana coast: Examining site and stock × site interaction
Lindsay Schwarting Miller, Jerome F. La Peyre, Megan K. LaPeyre
2017, Journal of Shellfish Research (36) 341-351
Recognition of the global loss of subtidal oyster reefs has led to a rise in reef restoration efforts, including in the Gulf of Mexico. Created reef success depends entirely on selecting a location that supports long-term oyster growth and survival, including the recruitment and survival of on-reef oysters. Significant changes...
An evaluation of sampling and full enumeration strategies for Fisher Jenks classification in big data settings
Sergio J. Rey, Philip A. Stephens, Jason R. Laura
2017, Transactions in GIS (21) 796-810
Large data contexts present a number of challenges to optimal choropleth map classifiers. Application of optimal classifiers to a sample of the attribute space is one proposed solution. The properties of alternative sampling-based classification methods are examined through a series of Monte Carlo simulations. The impacts of spatial autocorrelation, number...
Uncertainty, variability, and earthquake physics in ground‐motion prediction equations
Annemarie S. Baltay Sundstrom, Thomas C. Hanks, Norm A. Abrahamson
2017, Bulletin of the Seismological Society of America (107) 1754-1772
Residuals between ground‐motion data and ground‐motion prediction equations (GMPEs) can be decomposed into terms representing earthquake source, path, and site effects. These terms can be cast in terms of repeatable (epistemic) residuals and the random (aleatory) components. Identifying the repeatable residuals leads to a GMPE with reduced uncertainty for a...
Spatial heterogeneity of within-stream methane concentrations
John T. Crawford, Luke C. Loken, William E. West, Benjamin Crary, Seth A. Spawn, Nicholas Gubbins, Stuart E. Jones, Robert G. Striegl, Emily H. Stanley
2017, Journal of Geophysical Research G: Biogeosciences (122) 1036-1048
Streams, rivers, and other freshwater features may be significant sources of CH4 to the atmosphere. However, high spatial and temporal variabilities hinder our ability to understand the underlying processes of CH4 production and delivery to streams and also challenge the use of scaling approaches across large areas. We studied a stream having...
Compilation of geospatial data for the mineral industries and related infrastructure of Latin America and the Caribbean
Michael S. Baker, Spencer D. Buteyn, Philip A. Freeman, Michael H. Trippi, Loyd M. Trimmer III
2017, Open-File Report 2017-1079
This report describes the U.S. Geological Survey’s (USGS) ongoing commitment to its mission of understanding the nature and distribution of global mineral commodity supply chains by updating and publishing the georeferenced locations of mineral commodity production and processing facilities, mineral exploration and development sites, and mineral commodity exporting ports in...
Simulated groundwater flow paths, travel time, and advective transport of nitrogen in the Kirkwood-Cohansey aquifer system, Barnegat Bay–Little Egg Harbor Watershed, New Jersey
Lois M. Voronin, Stephen J. Cauller
2017, Scientific Investigations Report 2016-5169
Elevated concentrations of nitrogen in groundwater that discharges to surface-water bodies can degrade surface-water quality and habitats in the New Jersey Coastal Plain. An analysis of groundwater flow in the Kirkwood-Cohansey aquifer system and deeper confined aquifers that underlie the Barnegat Bay–Little Egg Harbor (BB-LEH) watershed and estuary was conducted...
Final Report fr critical thresholds and ecosystem services for coastal ecological and human climate adaptation
Michelle D. Staudinger, Emily J. Powell, Andrew Milliken, Megan C. Tyrrell
2017, Report
Understanding how climate change will impact natural and human communities is a crucial part of decision making and management related to the protection of our coasts. As the effects of climate change on ecological communities grow, the possibility of crossing tipping points or thresholds of viability increases the potential for...
Initial pulse of Siberian Traps sills as the trigger of the end-Permian mass extinction
Seth D. Burgess, James D. Muirhead, Samuel A. Bowring
2017, Nature Communications (8) 1-6
Mass extinction events are short-lived and characterized by catastrophic biosphere collapse and subsequent reorganization. Their abrupt nature necessitates a similarly short-lived trigger, and large igneous province magmatism is often implicated. However, large igneous provinces are long-lived compared to mass extinctions. Therefore, if large igneous provinces are an effective trigger, a...
CO2 time series patterns in contrasting headwater streams of North America
John T. Crawford, Emily H. Stanley, Mark M. Dornblaser, Robert G. Striegl
2017, Aquatic Sciences (79) 473-486
We explored the underlying patterns of temporal stream CO2 partial pressure (pCO2) variability using highfrequency sensors in seven disparate headwater streams distributed across the northern hemisphere. We also compared this dataset of [40,000 pCO2 records with other published records from lotic systems. Individual stream sites exhibited relatively distinct pCO2 patterns...
Model selection for the North American Breeding Bird Survey: A comparison of methods
William A. Link, John R. Sauer, Daniel Niven
2017, Condor (119) 546-556
The North American Breeding Bird Survey (BBS) provides data for >420 bird species at multiple geographic scales over 5 decades. Modern computational methods have facilitated the fitting of complex hierarchical models to these data. It is easy to propose and fit new models, but little attention has been given to...