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Publication Extents

Not all publications have extents, not all extents are completely accurate
Long-term video surveillance and automated analyses reveal arousal patterns in groups of hibernating bats
David T. S. Hayman, Paul M. Cryan, Paul D. Fricker, Nicholas G. Dannemiller
2017, Methods in Ecology and Evolution (8) 1813-1821
Understanding natural behaviours is essential to determining how animals deal with new threats (e.g. emerging diseases). However, natural behaviours of animals with cryptic lifestyles, like hibernating bats, are often poorly characterized. White-nose syndrome (WNS) is an unprecedented disease threatening multiple species of hibernating bats, and pathogen-induced changes...
Mapping burned areas using dense time-series of Landsat data
Todd Hawbaker, Melanie K. Vanderhoof, Yen-Ju G. Beal, Joshua Takacs, Gail L. Schmidt, Jeff T. Falgout, Brad Williams, Nicole M. Brunner, Megan K. Caldwell, Joshua J. Picotte, Stephen M. Howard, Susan Stitt, John L. Dwyer
2017, Remote Sensing of Environment (198) 504-522
Complete and accurate burned area data are needed to document patterns of fires, to quantify relationships between the patterns and drivers of fire occurrence, and to assess the impacts of fires on human and natural systems. Unfortunately, in many areas existing fire occurrence datasets are known to be incomplete. Consequently,...
Assessing welfare of individual sirenians in the wild and in captivity
Mark Flint, Robert K. Bonde
2017, Book chapter, Marine mammal welfare
Assessing the welfare of wild populations of sirenians has required a “generalist” approach. The outcome has been a subjective decision as to whether what the observers are witnessing in an individual or group of animals is normal and whether that has positive or negative consequences. The understanding of sirenian welfare...
Factors affecting marsh vegetation at the Liberty Island Conservation Bank in the Cache Slough region of the Sacramento–San Joaquin Delta, California
James L. Orlando, Judith Z. Drexler
2017, Open-File Report 2017-1077
The Liberty Island Conservation Bank (LICB) is a tidal freshwater marsh restored for the purpose of mitigating adverse effects on sensitive fish populations elsewhere in the region. The LICB was completed in 2012 and is in the northern Cache Slough region of the Sacramento–San Joaquin Delta. The wetland vegetation at...
Human interactions with sirenians (manatees and dugongs)
Robert K. Bonde, Mark Flint
2017, Book chapter, Marine mammal welfare
There are three extant sirenian species of the Trichechidae family and one living Dugongidae family member. Given their close ties to coastal and often urbanized habitats, sirenians are exposed to many types of anthropogenic activities that result in challenges to their well-being, poor health, and even death. In the wild,...
Reassessing rainfall in the Luquillo Mountains, Puerto Rico: Local and global ecohydrological implications
Sheila F. Murphy, Robert F. Stallard, Martha A. Scholl, Grizelle Gonzalez, Angel J. Torres-Sanchez
2017, PLoS ONE (12) 1-26
Mountains receive a greater proportion of precipitation than other environments, and thus make a disproportionate contribution to the world’s water supply. The Luquillo Mountains receive the highest rainfall on the island of Puerto Rico and serve as a critical source of water to surrounding communities. The area’s role as a...
The Valmy thrust sheet: A regional structure formed during the protracted assembly of the Roberts Mountains allochthon, Nevada, USA
Christopher S. Holm-Denoma, Albert H. Hofstra, Barnaby W. Rockwell, Paula J. Noble
2017, GSA Bulletin (129) 1521-1536
A synthesis of field, biostratigraphic, detrital zircon geochronologic, and remote sensing data across north-central Nevada, United States, defines a thick, regionally extensive sheet of Middle–Upper Ordovician Valmy Formation quartzite that structurally overlies deformed early Paleozoic units of the Roberts Mountains allochthon. Late Paleozoic regional unconformities that record tectonic disruptions have...
Quantifying the heterogeneity of the tectonic stress field using borehole data
Martin Schoenball, Nicholas C. Davatzes
2017, Journal of Geophysical Research B: Solid Earth (122) 6737-6756
The heterogeneity of the tectonic stress field is a fundamental property which influences earthquake dynamics and subsurface engineering. Self-similar scaling of stress heterogeneities is frequently assumed to explain characteristics of earthquakes such as the magnitude-frequency relation. However, observational evidence for such scaling of the stress field heterogeneity is scarce.We analyze...
A 184-year record of river meander migration from tree rings, aerial imagery, and cross sections
Derek M. Schook, Sara L. Rathburn, Jonathan M. Friedman, J. Marshall Wolf
2017, Geomorphology (293) 227-239
Channel migration is the primary mechanism of floodplain turnover in meandering rivers and is essential to the persistence of riparian ecosystems. Channel migration is driven by river flows, but short-term records cannot disentangle the effects of land use, flow diversion, past floods, and climate change. We used three data sets...
Trimming a hazard logic tree with a new model-order-reduction technique
Keith Porter, Edward H. Field, Kevin R. Milner
2017, Earthquake Spectra (33) 857-874
The size of the logic tree within the Uniform California Earthquake Rupture Forecast Version 3, Time-Dependent (UCERF3-TD) model can challenge risk analyses of large portfolios. An insurer or catastrophe risk modeler concerned with losses to a California portfolio might have to evaluate a portfolio 57,600 times to estimate risk in...
Using mineral geochemistry to decipher slab, mantle, and crustal input in the generation of high-Mg andesites and basaltic andesites from the northern Cascade Arc
May Sas, Susan DeBari, Michael A. Clynne, Brian G. Rusk
2017, American Mineralogist (102) 948-965
To better understand the role of slab melt in the petrogenesis of North Cascades magmas, this study focuses on petrogenesis of high-Mg lavas from the two northernmost active volcanoes in Washington. High-Mg andesites (HMA) and basaltic andesites (HMBA) in the Cascade Arc have high Mg# [molar Mg/(Mg+Fe2+)] relative to their...
Middle and Late Pleistocene glaciations in the southwestern Pamir and their effects on topography
Konstanze Stubner, Elena Grin, Alan J. Hidy, Mirjam Schaller, Ryan D. Gold, Lothar Ratschbacher, Todd Ehlers
2017, Earth and Planetary Science Letters (466) 181-194
Glacial chronologies provide insight into the evolution of paleo-landscapes, paleoclimate, topography, and the erosion processes that shape mountain ranges. In the Pamir of Central Asia, glacial morphologies and deposits indicate extensive past glaciations, whose timing and extent remain poorly constrained. Geomorphic data and 15 new 10Be...
Evidence of absence (v2.0) software user guide
Daniel Dalthorp, Manuela M. Huso, David Dail
2017, Data Series 1055
Evidence of Absence software (EoA) is a user-friendly software application for estimating bird and bat fatalities at wind farms and for designing search protocols. The software is particularly useful in addressing whether the number of fatalities is below a given threshold and what search parameters are needed to give...
Sediment gravity flows triggered by remotely generated earthquake waves
H. Paul Johnson, Joan S. Gomberg, Susan Hautala, Marie Salmi
2017, Journal of Geophysical Research B: Solid Earth (122) 4584-4600
Recent great earthquakes and tsunamis around the world have heightened awareness of the inevitability of similar events occurring within the Cascadia Subduction Zone of the Pacific Northwest. We analyzed seafloor temperature, pressure, and seismic signals, and video stills of sediment-enveloped instruments recorded during the 2011–2015 Cascadia Initiative experiment, and seafloor...
Methods for measuring bird-mediated seed rain: Insights from a Hawaiian mesic forest
Eli Rose, Meredith Stewart, Andrew Brinkman, Eben H. Paxton, Stephanie G. Yelenik
2017, Pacific Science (71) 287-302
Amount and diversity of bird-dispersed seed rain play important roles in determining forest composition, yet neither is easy to quantify. The complex ecological processes that influence seed movement make the best approach highly context specific. Although recent advances in seed rain theory emphasize quantifying source-specific seed shadows, many ecological questions...
Sparrow nest survival in relation to prescribed fire and woody plant invasion in a northern mixed-grass prairie
Robert K. Murphy, Terry L. Shaffer, Todd A. Grant, James L. Derrig, Cory S. Rubin, Courtney K. Kerns
2017, Wildlife Society Bulletin (41) 442-452
Prescribed fire is used to reverse invasion by woody vegetation on grasslands, but managers often are uncertain whether influences of shrub and tree reduction outweigh potential effects of fire on nest survival of grassland birds. During the 2001–2003 breeding seasons, we examined relationships of prescribed fire and woody vegetation to...
Field-trip guide for exploring pyroclastic density current deposits from the May 18, 1980, eruption of Mount St. Helens, Washington
Brittany D. Brand, Nicholas Pollock, Damiano Sarocchi, Josef Dufek, Michael A. Clynne
2017, Scientific Investigations Report 2017-5022-C
Pyroclastic density currents (PDCs) are one of the most dangerous phenomena associated with explosive volcanism. To help constrain damage potential, a combination of field studies, laboratory experiments, and numerical modeling are used to establish conditions that influence PDC dynamics and depositional processes, including runout distance. The objective of this field...
Historical changes in organic matter input to the muddy sediments along the Zhejiang-Fujian Coast, China over the past 160 years
Li-lei Chen, Jian Liu, Lei Xing, Ken W. Krauss, Jia-sheng Wang, Gang Xu, Li Li
2017, Organic Geochemistry (111) 13-25
The burial of sedimentary organic matter (SOM) in the large river-influenced estuarine-coastal regions is affected by hydrodynamic sorting, diagenesis and human activities. Typically, the inner shelf region of the East China Sea is a major carbon sink of the Yangtze River-derived fine-grained sediments. Most of the previous work concentrated on...
Baseline assessments for coral reef community structure and demographics on West Maui
Bernardo Vargas-Angel, Darla White, Curt D. Storlazzi, Tova Callender, Paulo Maurin
2017, Report
The coastal and upslope terrains of West Maui have had a long history of impacts owing to more than a century of human activities. Resource extraction, agriculture, as well as residential and resort development have caused land-based pollution that impairs water quality and adversely impact the adjacent marine ecosystem. Today,...
Fifty-eighth supplement to the American Ornithologists' Union: Check-list of North American Birds
Terry Chesser, Kevin J Burns, Carla Cicero, Jon L. Dunn, Andrew W. Kratter, Irby J. Lovette, Pamela C. Rasmussen, J.V. Remsen Jr., James D. Rising, Douglas F. Stotz, Kevin Winker
2017, The Auk (134) 751-773
This is the 17th supplement since publication of the 7th edition of the Check-list of North American Birds (American Ornithologists' Union [AOU] 1998). It summarizes decisions made between April 15, 2016, and April 15, 2017, by the AOS's Committee on Classification and Nomenclature—North and Middle America. The Committee has continued...
Acquisition of Borrelia burgdorferi infection by larval Ixodes scapularis (Acari: Ixodidae) associated with engorgement measures
Janelle Couret, M.C. Dyer, T.N. Mather, S. Han, J.I. Tsao, R.A. LeBrun, Howard S. Ginsberg
2017, Journal of Medical Entomology (54) 1055-1060
Measuring rates of acquisition of the Lyme disease pathogen, Borrelia burgdorferi sensu lato Johnson, Schmid, Hyde, Steigerwalt & Brenner, by the larval stage of Ixodes scapularis Say is a useful tool for xenodiagnoses of B. burgdorferi in vertebrate hosts. In the nymphal and adult stages of I. scapularis, the duration of attachment to hosts has been shown...
Cambrian origin of the CYP27C1-mediated vitamin A1-to-A2 switch, a key mechanism of vertebrate sensory plasticity
Ala Morshedian, Matthew B. Toomery, Gabriel E. Pollock, Rikard Frederiksen, Jennifer Enright, Stephen D. McCormick, M. Carter Cornwall, Gordon L. Fain, Joseph C. Corbo
2017, Royal Society Open Science (4)
The spectral composition of ambient light varies across both space and time. Many species of jawed vertebrates adapt to this variation by tuning the sensitivity of their photoreceptors via the expression of CYP27C1, an enzyme that converts vitamin A1 into vitamin A2, thereby shifting the ratio of vitamin A1-based rhodopsin to...
Hourly storm characteristics along the U.S. West Coast: Role of atmospheric rivers in extreme precipitation
Maryam A. Lamjiri, Michael D. Dettinger, F. Martin Ralph, B. Guan
2017, Geophysical Research Letters (44) 7020-7028
Gridded hourly precipitation observations over the conterminous U.S., from 1948 to 2002, are analyzed to determine climatological characteristics of storm precipitation totals. Despite generally lower hourly intensities, precipitation totals along the U.S. West Coast (USWC) are comparable to those in southeast U.S. (SEUS). Storm durations, more so than hourly intensities,...
Determination of earthquake magnitude for early warning from the time-dependence of P-wave amplitudes
Shunta Noda, William L. Ellsworth
2017, Bulletin of the Seismological Society of America (107) 1860-1867
We propose a method that utilizes the time dependence of P‐wave displacement amplitudes to estimate the final magnitude (⁠M⁠) for earthquake early warning (EEW) before the arrival of the peak amplitude. A relation between M and P‐wave displacement amplitude is employed for the method. Its value is set as a...
Adding a nitrogen footprint to Colorado State University’s sustainability plan
Jacob Kimiecik, Jill Baron, Timothy Weinmann, Emily Taylor
2017, Sustainability (10) 89-95
As a large land grant university with more than 32,000 students, Colorado State University has both on-campus non-agricultural and agricultural sources of nitrogen (N) released to the environment. We used the Nitrogen Footprint Tool to estimate the amount of N released from different sectors of the university for the CSU...