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Flood-Inundation Maps of the Current and Jacks Fork Rivers including the Ozark National Scenic Riverways, Southeast Missouri, 2023
David C. Heimann, Jason L. High, Allison A. Atkinson, Paul H. Rydlund Jr.
2025, Scientific Investigations Report 2025-5092
Digital flood-inundation maps for a 131.8-mile reach of the Current River and a 44.6-mile reach of the Jacks Fork River, in southeast Missouri, were created by the U.S. Geological Survey (USGS) in cooperation with the Ozark Foothills Regional Planning Commission and the South Central Ozark Council of Governments. The maps...
ShakeAlert®—Communication, education, outreach and technical engagement strategic vision
Robert Michael deGroot, Sara K. McBride, Margaret J. Vinci, Gabriel C. Lotto, Megan L. Anderson, Danielle F. Sumy, Brian Terbush
2025, Circular 1561
Executive Summary In 2006, the U.S. Geological Survey (USGS) began directly supporting ShakeAlert® research and in 2012 the ShakeAlert demonstration system began testing (Given and others, 2018). The ShakeAlert earthquake early warning (EEW) system is a partnership between the U.S. Geological Survey (USGS) and the three West Coast States (Washington, Oregon,...
Flood-inundation maps for Río de la Plata in and near Comerío, Puerto Rico, 2025
Chad J. Ostheimer, Legna M. Torres-Garcia
2025, Scientific Investigations Report 2025-5094
Digital flood-inundation maps for a 3.1-mile reach of Río de la Plata in and near Comerío, Puerto Rico, were created by the U.S. Geological Survey (USGS). Water-surface profiles were computed for the stream reach by using a one-dimensional steady-state step-backwater model. The model was calibrated to the current (2025) stage-streamflow...
Pit tag application in native freshwater mussels: Case studies across small, medium, and large rivers
Jeremy S. Tiemann, Matthew J. Ashton, Sarah A. Douglass, Alison P. Stodola, Rachel M. Vinsel, Teresa J. Newton
2025, Freshwater Mollusk Biology and Conservation (28) 71-82
Since their first use in the mid-1980s, external passive integrated transponder (PIT) tags have facilitated innovative investigations into multiple biological traits of animals. For native freshwater mussels, PIT tags are frequently used in capture-mark-recapture applications because they allow repeated, noninvasive sampling, are easy to apply, have high retention rates, and...
Breeder turnover creates allelic variation in groups of gray wolves
David Edward Ausband
2025, Heredity (134) 577-583
Genetic diversity is an important driver affecting the health of wildlife populations. In cooperatively breeding species, human impacts and breeder turnover can affect genetic diversity in groups. We generally do not have strong inferences about how the genetic composition of a group changes through time as individuals are lost (e.g.,...
Fluid inclusion constraints on the geometry of the magmatic plumbing system beneath Mauna Loa – Part 2: Xenoliths
Penny E. Wieser, Matthew Gleeson, Berenise Rangel, Charlotte DeVitre, Alexander T. Bearden, Kendra J. Lynn, Paula Antoshechkina, Amy Gaffney, Brian Monteleone
2025, Bulletin of Volcanology (87)
Mauna Loa volcano erupts crystal-poor material at its summit and more crystal-rich material on its rift zones. Some of the more olivine-rich lava flows contain xenoliths with diverse mineralogy, including cumulate harzburgites with high-Mg# orthopyroxenes and high-Fo olivines (both > 84). Previous experimental work and thermodynamic modelling has proposed that high-Mg# orthopyroxenes...
A simple predictive model for salt marsh internal deterioration under sea-level rise and sediment deficits: Application to Chesapeake Bay
Neil K. Ganju, Kate Ackerman, Zafer Defne, Giulio Mariotti, David Curson, Zachary Posnik, Joel Carr, Joanna Grand
2025, Estuaries and Coasts (48)
Salt marshes are dynamic biogeomorphic systems reliant on autochthonous and allochthonous input to maintain their three-dimensional configuration. Sea-level rise, subsidence, and sediment deficits can lead to submergence, open-water expansion, and ultimately loss of the vegetated marsh plain and associated ecosystem services. Widely used management-focused models focus on vegetation zonation in...
River-to-lake transitional areas contribute disproportionately to in-lake nutrient loading
Nolan J.T. Pearce, James H. Larson, Rebecca M. Kreiling, Mary Anne Evans, Sean Bailey, Kenna J. Gierke, Lynn Bartsch, Marguerite A. Xenopoulos, Paul C. Frost
2025, Ocean-Land-Atmosphere Research (4)
River-to-lake transitional areas are biogeochemically active sections of the aquatic continuum that are often understudied compared to their adjoining environments. Internal nutrient loading from river-to-lake transitional areas may be a considerable source of nutrients to lakes and if overlooked disconnect upstream management initiatives from in-lake improvements. To contextualize internal nutrient...
Integrated species distribution model using historical data shows decline in a common semi-aquatic mammal
John G. Crockett, Charles B. Brown, Brian Daniel Gerber
2025, Animal Conservation
Effective conservation requires an understanding of drivers of a species' distribution as well as long-term changes in their distribution. In recent decades, advances in data collection and analysis have allowed researchers to integrate a wide range of information to model species distributions, particularly by allowing presence-only data...
Amitriptyline and nortriptyline induce ocular toxicity in early life stage zebrafish (Danio rerio)
Marwin Jafari, Jason Tyler Magnuson, Fabian Essfeld, Sebastian Eilebrecht, Katharina Brotzmann, Daniela M. Pampanin
2025, Comparative Biochemistry and Physiology Part C: Toxicology & Pharmacology (299)
The global use of antidepressants has steadily increased, raising concern to aquatic ecosystems due to the incomplete removal during wastewater treatment. Tricyclic antidepressants (TCAs) act on the neuronal system by inhibiting the reuptake of serotonin and norepinephrine. However, despite visual function being heavily dependent on the neuronal system, a knowledge...
Characterization of suspended sediment flux and streamflow trends in the Fountain Creek watershed, Colorado, 1998 through 2022
Myles S. Downhour, Erin K. Hennessy, Carleton R. Bern
2025, Scientific Investigations Report 2025-5089
The U.S. Geological Survey evaluated long-term suspended sediment flux and streamflow datasets for temporal trends (monotonic and step trends) at 10 streamgage sites within the Fountain Creek watershed in central Colorado using the Mann-Kendall test (monotonic trend) and the Wilcoxon signed-rank test (step trend). Data were collected in cooperation with...
Earth Mapping Resources Initiative protocols—Sampling hard-rock mine waste and perpetual mine water sources
Kate M. Campbell, Robert R. Seal, Nadine M. Piatak, Jaime S. Azain, Jean M. Morrison, Sarah Jane White, Andrew H. Manning, Katherine Walton-Day, JoAnn M. Holloway, Bronwen Wang
2025, Scientific Investigations Report 2025-5068
Supporting the overarching goal to evaluate critical minerals nationwide, the mine waste characterization effort in the U.S. Geological Survey (USGS) Earth Mapping Resources Initiative has created a series of protocols to standardize sampling carried out under this effort by the participating State geological surveys and their cooperators. The protocols are...
Assessment of channel morphology, hydraulics, and bedload transport along the Siletz River, western Oregon
Krista L. Jones, Mackenzie K. Keith, Tessa M. Harden, James S. White, Stan van de Wetering, Jason B. Dunham
2025, Scientific Investigations Report 2025-5063
Significant FindingsChinook salmon (Oncorhynchus tshawytscha) and Pacific lamprey (Entosphenus tridentatus) are native, anadromous fish species in the Siletz River Basin, western Oregon, that face many threats to their survival in freshwater and the ocean. The Confederated Tribes of Siletz Indians of Oregon seek to mitigate freshwater threats to Chinook salmon...
Upper Mississippi River Restoration future hydrology meeting series
Molly Van Appledorn, Lucie Sawyer
2025, Open-File Report 2025-1050
The Upper Mississippi River Restoration (UMRR) program, a broad partnership of State and Federal agencies administered by the U.S. Army Corps of Engineers, integrates ecosystem monitoring, research, and modeling to rehabilitate habitat and evaluate ecosystem trends over time in the Upper Mississippi River System. Hydrologic data are integral to the...
A regional model comparison between MODPATH and MT3D of groundwater travel time distributions
Emily A. Baker, Paul Juckem, Daniel T. Feinstein, David J. Hart
2025, Groundwater (63) 861-873
Groundwater quality changes in wells and streams lag behind changes to land use due to groundwater travel times. Two contaminant transport methods were compared to assess differences in their simulated travel time distributions (TTDs) to streams and wells in the Wisconsin Central Sands. MODPATH simulates advective groundwater flow with particle...
Persistence of a declining anuran species across its distribution
Erin L. Koen, Edward Hance Ellington, William J. Barichivich, Howard Kochman, Kevin M. Enge, Susan E. Walls
2025, PLoS ONE (20)
Information on a species’ population dynamics, such as changes in abundance and distribution, can be used to identify declining populations and initiate conservation efforts and protections. For the Ornate Chorus Frog (Pseudacris ornata), anecdotal observations of local extirpation and population declines have been noted, but trends in its range-wide population...
Bears avoid residential neighborhoods in response to the experimental reduction of anthropogenic attractants
Cassandre C. Venumière-Lefebvre, Heather E. Johnson, Stewart W. Breck, Mathew W. Alldredge, Kevin R. Crooks
2025, Frontiers in Ecology and Evolution (13)
Introduction: Urbanization is an extreme form of land use alteration, with human development driving changes in the distribution of resources available to wildlife. Some large carnivores have learned to exploit anthropogenic food resources in urban development, resulting in human-carnivore conflict that can have detrimental impacts to people and carnivores, as exemplified...
Apicomplexan and non-metazoan microeukaryotes in the thermosensitive reef-building coral Acropora hyacinthus shift in abundance throughout an extreme coral bleaching event
Athena Peterson, Sunni Patton, Emily Rose Schmeltzer, Carsten Grupstra, Lauren Howe-Kerr, J. Grace Klinges, Rebecca Maher, Adrianna Messyasz, Sarah Seabrook, Andrew Thurber, Adrienne Correa, Rebecca Vega Thurber
2025, Frontiers in Marine Science (12)
Coral reefs play vital roles in global marine systems and are currently facing increased threats of bleaching. Coral bleaching is heavily influenced by the host-associated microeukaryote community – most notably the dinoflagellate family Symbiodiniaceae. The apicomplexan family Corallicolidae, is the second most abundant member of the microeukaryote community, yet their...
Accounting for seasonal patterns in bird availability prevents biased population trend estimates with advancing spring phenology
Emily L. Weiser, James Johnson, Steven M. Matsuoka, Colleen M. Handel
2025, Ornithological Applications (127) 1-11
Advancing spring phenology has been observed around the world, including changes in the timing of breeding of birds. When singing rates are tied to breeding stage, the rate at which birds are available for detection by surveyors can also show seasonal patterns that may shift with spring phenology. As the...
Beyond the mangroves: A global synthesis of tidal forested wetland types, drivers and future information opportunities
J. J. Kelleway, Gregory E. Noe, Ken Krauss, L.S. Brophy, W. H. Conner, J. A. Duberstein, D. A. Friess, K. Gedan, E. White Jr., M. F. Adame, J. B. Adams, R. C. Carvalho, A. Freddie, I. N. Ikenna, E. R. Ocasio, C. J. Owers, S. Sasmito, A. Swales, P. Stewart-Sinclair, R. D. Ward, I. Zabarte-Maeztu
2025, Preprint
There is increasing awareness of the global diversity of tidal forested wetlands (TFWs) and their significance in the provision of ecosystem services. These ecosystems, including mangrove forests, tidal freshwater forested wetlands, supratidal forests and transitional forests together span multiple climatic zones, geomorphic settings, and inundation and salinity regimes. We utilise...
Water withdrawal and consumption trends for thermoelectric-power plants in the conterminous United States, 2008-2020
Kenneth D. Skinner, Richard G. Niswonger, Melissa A. Harris, Brendan A. McCarthy, Catherine A. Chamberlin, Melissa A. Lombard, Timothy H. Diehl, Amy E. Galanter, Lillian E. Gorman Sanisaca, Jana S. Stewart
2025, Environmental Science and Technology: Water (5) 5280-5831
Freshwater-using utility-scale thermoelectric (TE) plant water-use estimates were evaluated for annual trends from 2008 to 2020 across the conterminous United States (CONUS) and within hydrologic regions. Overall, TE water withdrawal and consumption trends declined across CONUS by 14,335 and 278 million liters/day, respectively. Decreasing water withdrawal and consumption trends for...
Microbial source tracking in Cedar and Crane Creeks near Curtice, Ohio, 2021
Christopher M. Kephart, Lauren D. Lynch
2025, Scientific Investigations Report 2025-5079
Elevated concentrations of Escherichia coli (E. coli) bacteria and signs of sewage lead to impairment of Cedar and Crane Creeks near the town of Curtice, Ohio. In 2021, the U.S. Geological Survey, in cooperation with Ohio Environmental Protection Agency, collected samples and analyzed them for concentrations of E. coli and...
Strategic planning of prevention and surveillance for emerging diseases and invasive species
Jue Wang, Brenda J. Hanley, Noelle E. Thompson, Yu Gong, Daniel P. Walsh, Carlos Gonzalez-Crespo, Yitong Huang, James G. Booth, Joe N. Caudell, Landon A. Miller, Krysten L. Schuler
2025, PNAS (122)
Emerging infectious diseases and biological invasions pose increasing threats to public and ecosystems health. Proactive measures—such as prevention and surveillance taken before initial detection of the pathogen or species—are essential to ensure minimal spread prior to first detection. We developed an optimization model to determine where, when, and how much...
Ice Age biogeography corresponds with current climate vulnerability of freshwater fishes
Niall G. Clancy, Phaedra E. Budy, Annika W. Walters
2025, Freshwater Biology (70)
1. Both local environmental factors and historical biogeography shape ecological communities, but determining which historical biogeographical patterns correspond with contemporary climate vulnerability is an underused conservation method. The historical colonization patterns of freshwater fishes following the Pleistocene (“Ice Age”) glaciations offers an ideal model for comparing historical biogeography and climate-change...
Methods for estimating selected low-flow statistics at gaged and ungaged stream sites in Massachusetts
Gardner C. Bent, Elizabeth A. Ahearn, Jennifer H. Fair
2025, Scientific Investigations Report 2025-5082
The U.S. Geological Survey, in cooperation with the Massachusetts Department of Conservation and Recreation, Office of Water Resources, computed selected at-site streamflow statistics at U.S. Geological Survey streamgages in and near Massachusetts and developed regional regression equations for estimating selected streamflows at ungaged stream sites in Massachusetts. Two sets of...