A California statewide three-dimensional seismic velocity model from both absolute and differential times
G. Lin, C.H. Thurber, H. Zhang, E. Hauksson, P.M. Shearer, F. Waldhauser, T.M. Brocher, J. Hardebeck
2010, Bulletin of the Seismological Society of America (100) 225-240
We obtain a seismic velocity model of the California crust and uppermost mantle using a regional-scale double-difference tomography algorithm. We begin by using absolute arrival-time picks to solve for a coarse three-dimensional (3D) P velocity (VP) model with a uniform 30 km horizontal node spacing, which we then use as...
On the application of multilevel modeling in environmental and ecological studies
Song S. Qian, Thomas F. Cuffney, Ibrahim Alameddine, Gerard McMahon, Kenneth H. Reckhow
2010, Ecology (91) 355-361
This paper illustrates the advantages of a multilevel/hierarchical approach for predictive modeling, including flexibility of model formulation, explicitly accounting for hierarchical structure in the data, and the ability to predict the outcome of new cases. As a generalization of the classical approach, the multilevel modeling approach explicitly models the hierarchical...
Tectonic controls on nearshore sediment accumulation and submarine canyon morphology offshore La Jolla, Southern California
Nicolas Le Dantec, Leah J. Hogarth, Neal W. Driscoll, Jeffrey M. Babcock, Walter A. Barnhardt, William C. Schwab
2010, Marine Geology (268) 115-128
CHIRP seismic and swath bathymetry data acquired offshore La Jolla, California provide an unprecedented three-dimensional view of the La Jolla and Scripps submarine canyons. Shore-parallel patterns of tectonic deformation appear to control nearshore sediment thickness and distribution around the canyons. These shore-parallel patterns allow the impact of local tectonic deformation...
Characterization of Metarhizium species and varieties based on molecular analysis, heat tolerance and cold activity
E.K.K. Fernandes, C.A. Keyser, J.P. Chong, D.E.N. Rangel, M.P. Miller, D.W. Roberts
2010, Journal of Applied Microbiology (108) 115-128
Aims: The genetic relationships and conidial tolerances to high and low temperatures were determined for isolates of several Metarhizium species and varieties. Methods and Results: Molecular-based techniques [AFLP and rDNA (ITS1, ITS2 and 5??8S) gene sequencing] were used to characterize morphologically identified Metarhizium spp. isolates from a wide range of...
Temporal and spatial distributions of sediment mercury at salt pond wetland restoration sites, San Francisco Bay, CA, USA
A. Keith Miles, M.A. Ricca
2010, Science of the Total Environment (408) 1154-1165
Decommissioned agricultural salt ponds within south San Francisco Bay, California, are in the process of being converted to habitat for the benefit of wildlife as well as water management needs and recreation. Little is known of baseline levels of contaminants in these ponds, particularly mercury (Hg), which has a well...
Geologie study off gravels of the Agua Fria River, Phoenix, AZ
W. H. Langer, E. Dewitt, D.T. Adams, T. O’Briens
2010, Mining Engineering (62) 27-31
The annual consumption of sand and gravel aggregate in 2006 in the Phoenix, AZ metropolitan area was about 76 Mt (84 million st) (USGS, 2009), or about 18 t (20 st) per capita. Quaternary alluvial deposits in the modern stream channel of the Agua Fria River west of Phoenix are...
Night sampling improves indices used for management of yellow perch in Lake Erie
P.M. Kocovsky, M.A. Stapanian, C.T. Knight
2010, Fisheries Management and Ecology (17) 10-18
Catch rate (catch per hour) was examined for age-0 and age-1 yellow perch, Perca flavescens (Mitchill), captured in bottom trawls from 1991 to 2005 in western Lake Erie: (1) to examine variation of catch rate among years, seasons, diel periods and their interactions; and (2) to determine whether sampling during...
Origin and extent of fresh paleowaters on the Atlantic continental shelf, USA
D. Cohen, M. Person, P. Wang, C.W. Gable, D. Hutchinson, A. Marksamer, Brandon Dugan, H. Kooi, K. Groen, D. Lizarralde, R.L. Evans, Frederick D. Day-Lewis, John W. Lane Jr.
2010, Ground Water (48) 143-158
While the existence of relatively fresh groundwater sequestered within permeable, porous sediments beneath the Atlantic continental shelf of North and South America has been known for some time, these waters have never been assessed as a potential resource. This fresh water was likely emplaced during Pleistocene sea-level low stands when...
Longitudinal differences in habitat complexity and fish assemblage structure of a great plains river
J.L. Eitzmann, C.P. Paukert
2010, American Midland Naturalist (163) 14-32
We investigated the spatial variation in the Kansas River (USA) fish assemblage to determine how fish community structure changes with habitat complexity in a large river. Fishes were collected at ten sites throughout the Kansas River for assessing assemblage structure in summer 2007. Aerial imagery indicated riparian land use within...
Housing growth in and near United States protected areas limits their conservation value
V. C. Radeloff, S. I. Stewart, T. J. Hawbaker, U. Gimmi, A.M. Pidgeon, C.H. Flather, R. B. Hammer, D.P. Helmers
2010, Proceedings of the National Academy of Sciences of the United States of America (107) 940-945
Protected areas are crucial for biodiversity conservation because they provide safe havens for species threatened by land-use change and resulting habitat loss. However, protected areas are only effective when they stop habitat loss within their boundaries, and are connected via corridors to other wild areas. The effectiveness of protected areas...
Event-driven sediment flux in Hueneme and Mugu submarine canyons, southern California
J. P. Xu, P.W. Swarzenski, M. Noble, A.-C. Li
2010, Marine Geology (269) 74-88
Vertical sediment fluxes and their dominant controlling processes in Hueneme and Mugu submarine canyons off south-central California were assessed using data from sediment traps and current meters on two moorings that were deployed for 6 months during the winter of 2007. The maxima of total particulate flux, which reached as...
Effects of altered groundwater chemistry upon the pH-dependency and magnitude of bacterial attachment during transport within an organically contaminated sandy aquifer
Ronald W. Harvey, David W. Metge, Larry B. Barber, George R. Aiken
2010, Water Research (44) 1062-1071
The effects of a dilute (ionic strength = 5 × 10−3 M) plume of treated sewage, with elevated levels (3.9 mg/L) of dissolved organic carbon (DOC), upon the pH-dependency and magnitude of bacterial transport through an iron-laden, quartz sand aquifer (Cape Cod, MA) were evaluated using sets of replicate, static minicolumns. Compared with uncontaminated groundwater, the...
Surface elevation change and susceptibility of different mangrove zones to sea-level rise on Pacific high islands of Micronesia
K. W. Krauss, Donald R. Cahoon, J. A. Allen, K. C. Ewel, J.C. Lynch, Nicole Cormier
2010, Ecosystems (13) 129-143
Mangroves on Pacific high islands offer a number of important ecosystem services to both natural ecological communities and human societies. High islands are subjected to constant erosion over geologic time, which establishes an important source of terrigeneous sediment for nearby marine communities. Many of these sediments are deposited in mangrove...
MTBE, TBA, and TAME attenuation in diverse hyporheic zones
James Landmeyer, Paul M. Bradley, D.A. Trego, K.G. Hale, J.E. Haas II
2010, Ground Water (48) 30-41
Groundwater contamination by fuel-related compounds such as the fuel oxygenates methyl tert-butyl ether (MTBE), tert-butyl alcohol (TBA), and tert-amyl methyl ether (TAME) presents a significant issue to managers and consumers of groundwater and surface water that receives groundwater discharge. Four sites were investigated on Long Island, New York, characterized by...
On the specification of structural equation models for ecological systems
James B. Grace, T. Michael Anderson, Han Olff, S.M. Scheiner
2010, Ecological Monographs (80) 67-87
The use of structural equation modeling (SEM) is often motivated by its utility for investigating complex networks of relationships, but also because of its promise as a means of representing theoretical concepts using latent variables. In this paper, we discuss characteristics of ecological theory and some of the challenges for...
Individual and colony-specific wintering areas of Pacific northern fulmars (Fulmarus glacialis)
Scott A. Hatch, Verena A. Gill, Daniel M. Mulcahy
2010, Canadian Journal of Fisheries and Aquatic Sciences (67) 386-400
Seabird mortality associated with longline fishing in the eastern Bering Sea occurs mainly from September to May, with northern fulmars (Fulmarus glacialis) comprising the majority (60%) of the bycatch. Along the west coast of North America, winter dieoffs of fulmars may be increasing in frequency and magnitude, the most severe...
Morphologic dating of fault scarps using airborne laser swath mapping (ALSM) data
G.E. Hilley, S. Delong, C. Prentice, K. Blisniuk, J.R. Arrowsmith Jr.
2010, Geophysical Research Letters (37)
Models of fault scarp morphology have been previously used to infer the relative age of different fault scarps in a fault zone using labor-intensive ground surveying. We present a method for automatically extracting scarp morphologic ages within high-resolution digital topography. Scarp degradation is modeled as a diffusive mass transport process...
Headwater streams and forest management: does ecoregional context influence logging effects on benthic communities?
R. Bruce Medhurst, Mark S. Wipfli, Chris Binckley, Karl Polivka, Paul F. Hessburg, R. Brion Salter
2010, Hydrobiologia (641) 71-83
Effects of forest management on stream communities have been widely documented, but the role that climate plays in the disturbance outcomes is not understood. In order to determine whether the effect of disturbance from forest management on headwater stream communities varies by climate, we evaluated benthic macroinvertebrate communities in 24...
A global overview of drought and heat-induced tree mortality reveals emerging climate change risks for forests
Craig D. Allen, A.K. Macalady, H. Chenchouni, D. Bachelet, N. McDowell, Michel Vennetier, T. Kitzberger, A. Rigling, D.D. Breshears, E. H. Hogg, P. Gonzalez, R. Fensham, Z. Zhang, J. Castro, N. Demidova, J.-H. Lim, G. Allard, S. W. Running, A. Semerci, N. Cobb
2010, Forest Ecology and Management (259) 660-684
Greenhouse gas emissions have significantly altered global climate, and will continue to do so in the future. Increases in the frequency, duration, and/or severity of drought and heat stress associated with climate change could fundamentally alter the composition, structure, and biogeography of forests in many regions. Of particular concern are...
In situ measurements of volatile aromatic hydrocarbon biodegradation rates in groundwater
I.M. Cozzarelli, B.A. Bekins, R.P. Eganhouse, E. Warren, H.I. Essaid
2010, Journal of Contaminant Hydrology (111) 48-64
Benzene and alkylbenzene biodegradation rates and patterns were measured using an in situ microcosm in a crude-oil contaminated aquifer near Bemidji, Minnesota. Benzene-D6, toluene, ethylbenzene, o-, m- and p-xylenes and four pairs of C3- and C4-benzenes were added to an in situ microcosm and studied over a 3-year period. The...
Incubating rainbow trout in soft water increased their later sensitivity to cadmium and zinc
Christopher A. Mebane, Daniel P. Hennessy, Frank S. Dillon
2010, Water, Air, & Soil Pollution (205) 245-250
Water hardness is well known to affect the toxicity of some metals; however, reports on the influence of hardness during incubation or acclimation on later toxicity to metals have been conflicting. We incubated rainbow trout (Oncorhynchus mykiss) near the confluence of two streams, one with soft water and...
Recovery of Renibacterium salmoninarum from naturally infected salmonine stocks in Michigan using a modified culture protocol
M. Faisal, A.E. Eissa, C. E. Starliper
2010, Journal of Advanced Research (1) 95-102
Renibacterium salmoninarum, the causative agent of bacterial kidney disease (BKD), is a fastidious and slow-growing bacterium that is extremely difficult to grow in vitro. Herein, we describe a modified primary culture protocol that encompasses a modified bacteriological culture medium and a tissue processing procedure. In order to facilitate the release...
Effects of invasive alien kahili ginger (Hedychium gardnerianum) on native plant species regeneration in a Hawaiian rainforest
V. Minden, J.D. Jacobi, S. Porembski, H.J. Boehmer
2010, Applied Vegetation Science (13) 5-14
Questions: Does the invasive alien Hedychium gardnerianum (1) replace native understory species, (2) suppress natural regeneration of native plant species, (3) increase the invasiveness of other non-native plants and (4) are native forests are able to recover after removal of H. gardnerianum. Location: A mature rainforest in Hawai'i Volcanoes National...
Reconciling uncertain costs and benefits in bayes nets for invasive species management
M.A. Burgman, B.A. Wintle, C. A. Thompson, A. Moilanen, M.C. Runge, Y. Ben-Haim
2010, Risk Analysis (30) 277-284
Bayes nets are used increasingly to characterize environmental systems and formalize probabilistic reasoning to support decision making. These networks treat probabilities as exact quantities. Sensitivity analysis can be used to evaluate the importance of assumptions and parameter estimates. Here, we outline an application of info-gap theory to Bayes nets that...
Strong nonlinear photonic responses from microbiologically synthesized tellurium nanocomposites
K.-S. Liao, Jingyuan Wang, S. Dias, J. Dewald, N.J. Alley, Shaun Baesman, Ronald S. Oremland, W.J. Blau, S.A. Curran
2010, Chemical Physics Letters (484) 242-246
A new class of nanomaterials, namely microbiologically-formed nanorods composed of elemental tellurium [Te(0)] that forms unusual nanocomposites when combined with poly(m-phenylenevinylene-co-2,5-dioctoxy-phenylenevinylene) (PmPV) is described. These bio-nanocomposites exhibit excellent broadband optical limiting at 532 and 1064 nm. Nonlinear scattering, originating from the laser induced solvent bubbles and microplasmas, is responsible for...