Gross and microscopic lesions in corals from Micronesia
Thierry M. Work, Greta S. Aeby, Konrad A. Hughen
2015, Veterinary Pathology (53) 153-162
The authors documented gross and microscopic morphology of lesions in corals on 7 islands spanning western, southern, and eastern Micronesia, sampling 76 colonies comprising 30 species of corals among 18 genera, with Acropora, Porites, and Montipora dominating. Tissue loss comprised the majority of gross lesions sampled (41%), followed by discoloration...
Understanding nutrients in the Chesapeake Bay watershed and implications for management and restoration: The Eastern Shore
Scott W. Ator, Judith M. Denver
2015, Circular 1406
The Eastern Shore includes only a small part of the Chesapeake Bay watershed, but contributes disproportionately large loads of the excess nitrogen and phosphorus that have contributed to ecological and economic degradation of the bay in recent decades. Chesapeake Bay is the largest estuary in the United States and a...
A comparison of methods to estimate seismic phase delays--Numerical examples for coda wave interferometry
T. Dylan Mikesell, Alison E. Malcolm, Di Yang, Matthew M. Haney
2015, Geophysical Journal International (202) 347-360
Time-shift estimation between arrivals in two seismic traces before and after a velocity perturbation is a crucial step in many seismic methods. The accuracy of the estimated velocity perturbation location and amplitude depend on this time shift. Windowed cross correlation and trace stretching are two techniques commonly used to estimate...
A comparison of methods to predict historical daily streamflow time series in the southeastern United States
William H. Farmer, Stacey A. Archfield, Thomas M. Over, Lauren E. Hay, Jacob H. LaFontaine, Julie E. Kiang
2015, Scientific Investigations Report 2014-5231
Effective and responsible management of water resources relies on a thorough understanding of the quantity and quality of available water. Streamgages cannot be installed at every location where streamflow information is needed. As part of its National Water Census, the U.S. Geological Survey is planning to provide streamflow predictions for...
Wyoming greater sage-grouse habitat prioritization: A collection of multi-scale seasonal models and geographic information systems land management tools
Michael S. O’Donnell, Cameron L. Aldridge, Kevin E. Doherty, Bradley C. Fedy
2015, Data Series 891
With rapidly changing landscape conditions within Wyoming and the potential effects of landscape changes on sage-grouse habitat, land managers and conservation planners, among others, need procedures to assess the location and juxtaposition of important habitats, land-cover, and land-use patterns to balance wildlife requirements with multiple human land uses. Biologists frequently...
Water-quality trends for selected sites in the Boulder River and Tenmile Creek watersheds, Montana, based on data collected during water years 1997-2013
Steven K. Sando, Melanie L. Clark, Tom Cleasby, Elliott P. Barnhart
2015, Scientific Investigations Report 2015-5008
In the Boulder River and Tenmile Creek watersheds in southwestern Montana, there was intensive mining during a 40-year period after the discovery of gold in the early 1860s. Potential effects from the historic mining activities include acid-mine drainage and elevated concentrations of potentially toxic trace elements from mining remnants such...
Modelling non-Euclidean movement and landscape connectivity in highly structured ecological networks
Christopher Sutherland, Angela K. Fuller, J. Andrew Royle
2015, Methods in Ecology and Evolution (6) 169-177
Movement is influenced by landscape structure, configuration and geometry, but measuring distance as perceived by animals poses technical and logistical challenges. Instead, movement is typically measured using Euclidean distance, irrespective of location or landscape structure, or is based on arbitrary cost surfaces. A recently proposed extension of spatial...
Snake River fall Chinook salmon life history investigations, 1/1/2013 – 12/31/2013
Kenneth F. Tiffan, William P. Connor
2015, Report
Smallmouth bass predation on subyearling fall Chinook salmon was examined in the upper portion of Lower Granite Reservoir during 2013. During the time subyearlings were present in the reservoir, smallmouth bass were collected, their stomach contents removed for diet analysis, and their abundance estimated with mark-recapture techniques. In 2013, the...
Great (≥Mw8.0) megathrust earthquakes and the subduction of excess sediment and bathymetrically smooth seafloor
David W. Scholl, Stephe H. Kirby, Roland E. von Huene, Holly F. Ryan, Ray E. Wells, Eric L. Geist
2015, Geosphere (11) 236-265
Using older and in part flawed data, Ruff (1989) suggested that thick sediment entering the subduction zone (SZ) smooths and strengthens the trench-parallel distribution of interplate coupling. This circumstance was conjectured to favor rupture continuation and the generation of high-magnitude (≥Mw8.0) interplate thrust (IPT) earthquakes. Using larger and...
Quantifying avian predation on fish populations: integrating predator-specific deposition probabilities in tag-recovery studies
Nathan J. Hostetter, Allen F. Evans, Bradley M. Cramer, Ken Collis, Donald E. Lyons, Daniel D. Roby
2015, Transactions of the American Fisheries Society (144) 410-422
Accurate assessment of specific mortality factors is vital to prioritize recovery actions for threatened and endangered species. For decades, tag recovery methods have been used to estimate fish mortality due to avian predation. Predation probabilities derived from fish tag recoveries on piscivorous waterbird colonies typically reflect minimum estimates of predation...
Geochemical maps of stream sediments in central Colorado, from New Mexico to Wyoming
Robert G. Eppinger, Stuart A. Giles, Terry L. Klein
2015, Open-File Report 2015-1025
The U.S. Geological Survey has completed a series of geologic, mineral resource, and environmental assessment studies in the Rocky Mountains of central Colorado, from Leadville eastward to the range front and from New Mexico to the Wyoming border. Regional stream-sediment geochemical maps, useful for assessing mineral resources and environmental effects...
Water-quality characteristics in runoff for three discovery farms in North Dakota, 2008-12
Rochelle A. Nustad, Kathleen M. Rowland, Ronald Wiederholt
2015, Scientific Investigations Report 2014-5212
The U.S. Geological Survey, in cooperation with North Dakota State University Agriculture Research Extension and in collaboration with North Dakota State Department of Health, North Dakota State Water Commission, U.S. Environmental Protection Agency, and several agricultural producers, helped organize a Discovery Farms program in North Dakota in 2007. Discharge measurements...
A multipurpose camera system for monitoring Kīlauea Volcano, Hawai'i
Matthew R. Patrick, Tim R. Orr, Lopaka Lee, Cyril J. Moniz
2015, Techniques and Methods 13-A2
We describe a low-cost, compact multipurpose camera system designed for field deployment at active volcanoes that can be used either as a webcam (transmitting images back to an observatory in real-time) or as a time-lapse camera system (storing images onto the camera system for periodic retrieval during field visits). The...
UCERF3: A new earthquake forecast for California's complex fault system
Edward H. Field, 2014 Working Group on California Earthquake Probabilities
2015, Fact Sheet 2015-3009
With innovations, fresh data, and lessons learned from recent earthquakes, scientists have developed a new earthquake forecast model for California, a region under constant threat from potentially damaging events. The new model, referred to as the third Uniform California Earthquake Rupture Forecast, or "UCERF" (http://www.WGCEP.org/UCERF3), provides authoritative estimates of...
Assessing transmissible spongiform encephalopathy species barriers with an in vitro prion protein conversion assay
Christopher J. Johnson, Christina M. Carlson, Aaron R. Morawski, Alyson Manthei, Neil R. Cashman
2015, Journal of Visualized Experiments (97)
Studies to understanding interspecies transmission of transmissible spongiform encephalopathies (TSEs, prion diseases) are challenging in that they typically rely upon lengthy and costly in vivo animal challenge studies. A number of in vitro assays have been developed to aid in measuring prion species barriers, thereby reducing animal use and providing quicker results than animal...
Multivariate analysis relating oil shale geochemical properties to NMR relaxometry
Justin E. Birdwell, Kathryn E. Washburn
2015, Energy & Fuels (29) 2234-2243
Low-field nuclear magnetic resonance (NMR) relaxometry has been used to provide insight into shale composition by separating relaxation responses from the various hydrogen-bearing phases present in shales in a noninvasive way. Previous low-field NMR work using solid-echo methods provided qualitative information on organic constituents associated with raw and pyrolyzed oil...
Mercury in Pacific bluefin tuna (Thunnus orientalis):bioaccumulation and trans-Pacific Ocean migration
John A. Colman, Jacob I. Nogueira, Oscar C. Pancorbo, Carol A. Batdorf, Barbara A. Block
2015, Canadian Journal of Fisheries and Aquatic Sciences (72) 1-9
Pacific bluefin tuna (Thunnus orientalis) have the largest home range of any tuna species and are well known for the capacity to make transoceanic migrations. We report the measurement of mercury (Hg) concentrations in wild Pacific bluefin tuna (PBFT), the first reported with known size-of-fish and capture location. The results...
Trust Species and Habitat Branch: using the innovative approaches of today to conserve biodiversity for tomorrow
Patricia Stevens, Katie D. Walters
2015, Fact Sheet 2014-3071
Some of the biggest challenges facing wildlife today are changes to their environment from both natural and anthropogenic causes. Natural resource managers, planners, policy makers, industry and private landowners must make informed decisions and policies regarding management, conservation, and restoration of species, habitats, and ecosystem function in response to these...
Invasive Species Science Branch: research and management tools for controlling invasive species
Robert N. Reed, Katie D. Walters
2015, Fact Sheet 2014-3076
Invasive, nonnative species of plants, animals, and disease organisms adversely affect the ecosystems they enter. Like “biological wildfires,” they can quickly spread and affect nearly all terrestrial and aquatic ecosystems. Invasive species have become one of the greatest environmental challenges of the 21st century in economic, environmental, and human health...
National Unmanned Aircraft Systems Project Office
Susan E. Goplen, Jeff L. Sloan
2015, Fact Sheet 2015-3013
The U.S. Geological Survey (USGS) National Unmanned Aircraft Systems (UAS) Project Office leads the implementation of UAS technology in the Department of the Interior (DOI). Our mission is to support the transition of UAS into DOI as a new cost-effective tool for collecting remote-sensing data to monitor environmental conditions, respond...
Aquatics Systems Branch: transdisciplinary research to address water-related environmental problems
Quan Dong, Katie D. Walters
2015, Fact Sheet 2014-3073
The Aquatic Systems Branch at the Fort Collins Science Center is a group of scientists dedicated to advancing interdisciplinary science and providing science support to solve water-related environmental issues. Natural resource managers have an increasing need for scientific information and stakeholders face enormous challenges of increasing and competing demands for...
Integrated climate and land use change scenarios for California rangeland ecosystem services: wildlife habitat, soil carbon, and water supply
Kristin B. Byrd, Lorraine E. Flint, Pelayo Alvarez, Frank Casey, Benjamin M. Sleeter, Christopher E. Soulard, Alan L. Flint, Terry L. Sohl
2015, Landscape Ecology (30) 729-750
Context In addition to biodiversity conservation, California rangelands generate multiple ecosystem services including livestock production, drinking and irrigation water, and carbon sequestration. California rangeland ecosystems have experienced substantial conversion to residential land use and more intensive agriculture. Objectives To understand the potential impacts to rangeland ecosystem services, we developed...
Adaptive harvest management for the Svalbard population of Pink-Footed Geese: 2014 progress summary
Fred A. Johnson, J. Madsen
2015, Report
This document describes progress to date on the development of an adaptive harvest-management strategy for maintaining the Svalbard population of pink-footed geese (Anser brachyrhynchus) near their agreed target level (60 thousand) by providing for sustainable harvests in Norway and Denmark. Specifically, this report provides an assessment of the most recent...
Using near-real-time monitoring data from Pu'u 'Ō'ō vent at Kīlauea Volcano for training and educational purposes
Rachel Teasdale, Katrien van der Hoeven Kraft, Michael P. Poland
2015, Journal of Applied Volcanology (4)
Training non-scientists in the use of volcano-monitoring data is critical preparation in advance of a volcanic crisis, but it is currently unclear which methods are most effective for improving the content-knowledge of non-scientists to help bridge communications between volcano experts and non-experts. We measured knowledge gains for beginning-(introductory-level students) and...
Evaluating the status of individuals and populations: Advantages of multiple approaches and time scales
Daniel H. Monson, Lizabeth Bowen
2015, Book chapter, Sea Otter Conservation
The assessment of population status is a central goal of applied wildlife research and essential to the field of wildlife conservation. “Population status” has a number of definitions, the most widely used having to do with the current trajectory of the population (i.e., growing, stable, or declining), or the...