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Tortoise mycoplasmosis is one of the most extensively characterized infectious diseases of chelonians. A 1989 outbreak of upper respiratory tract disease (URTD) in free-ranging Agassiz's desert tortoises (Gopherus agassizii) brought together an investigative team of researchers, diagnosticians, pathologists, immunologists and clinicians from multiple institutions and agencies. Electron microscopic studies of...

Effective conservation of migratory species requires comprehensive knowledge of annual movement patterns. Such information is sparse for the Long-billed Curlew (Numenius americanus), a North American endemic shorebird of conservation concern. To test hypotheses about individual and area differences in migratory patterns across western North America, we tagged 29 curlews with...

Recent disasters such as the 2011 Tohoku, Japan, earthquake and tsunami; the 2013 Colorado floods; and the 2014 Oso, Washington, mudslide have raised awareness of catastrophic, sudden-onset hazards that arrive within minutes of the events that trigger them, such as local earthquakes or landslides. Due to the limited amount of...

The conversion of 50–90 percent of 15,100 acres of former salt evaporation ponds to tidal marsh habitat in the south San Francisco Bay, California, is planned as part of the South Bay Salt Pond Restoration Project. This large-scale habitat restoration may change the bioavailability of methylmercury. The South Bay already...

We successfully eradicated nonnative Brook Trout Salvelinus fontinalis by electrofishing from 2.4- to 3.0-km treatment reaches of four Rocky Mountain streams in Montana to conserve sympatric populations of native Westslope Cutthroat Trout Oncorhynchus clarkii lewisi. At least 6, and as many as 14, removal treatments of two to four electrofishing passes per treatment...

Elevation data are essential to a broad range of applications, including forest resources management, wildlife and habitat management, national security, recreation, and many others. For the State of Arizona, elevation data are critical for infrastructure and construction management, natural resources conservation, flood risk management, geologic resource assessment and hazard mitigation,...

Quality of life (QOL) is usually defined as a person’s general well-being, and may include individual perceptions of a variety of factors such family, work, finances, local community services, community relationships, surrounding environment, and other important aspects of their life, ultimately leading to life satisfaction. Energy development can have an...

Aeolian mineral dust is an important component of the Earth’s environmental systems, playing roles in the planetary radiation balance, as a source of fertilizer for biota in both terrestrial and marine realms and as an archive for understanding atmospheric circulation and paleoclimate in the geologic past. Crucial to understanding all...

To identify fish eggs collected in the field to species, a portable closed‐system fish egg incubation system was designed and used to incubate and hatch the eggs in the laboratory. The system is portable, small in scale (2.54 × 1.52 × 2.03 m), and affordable, with the approximate cost of the...

Microbial community metabolism relies on external digestion, mediated by extracellular enzymes that break down complex organic matter into molecules small enough for cells to assimilate. We analyzed the kinetics of 40 extracellular enzymes that mediate the degradation and assimilation of carbon, nitrogen and phosphorus by diverse aquatic and terrestrial microbial...

Logistic challenges make direct comparisons between laboratory- and field-based investigations into the size-dependent reactivity of nanomaterials difficult. This investigation sought to compare the size-dependent reactivity of nanoparticles in a field setting to a laboratory analog using the specific example of magnetite dissolution. Synthetic magnetite nanoparticles of three size intervals, ∼6...

Kaloko-Honokōhau National Historical Park (KAHO) on western Hawaiʻi was established in 1978 to preserve, interpret, and perpetuate traditional Native Hawaiian culture and activities, including the preservation of a variety of culturally and ecologically significant water resources that are vital to this mission. KAHO water bodies provide habitat for 1 threatened,...

This report provides an overview of the U.S. Geological Survey National Water-Quality Assessment program and National Stream Quality Accounting Network findings for pesticide occurrence in U.S. streams and rivers during 2002–11 and compares them to findings for the previous decade (1992–2001). In addition, pesticide stream concentrations were compared to Human...

This report is part of a series of pesticide trend assessments led by the National Water-Quality Assessment Program of the U.S. Geological Survey. This assessment focuses on major rivers of various sizes throughout the United States that have large watersheds with a range of land uses, changes in pesticide use,...

Insects are integral to most freshwater and terrestrial food webs, but due to their accumulation of environmental pollutants they are also contaminant vectors that threaten reproduction, development, and survival of consumers. Metamorphosis from larvae to adult can cause large chemical changes in insects, altering contaminant concentrations and fractionation of chemical...

Desert marshes, or cienegas, are extremely biodiverse habitats imperiled by anthropogenic demands for water and changing climates. Given their widespread loss and increased recognition, remarkably little is known about restoration techniques. In this study, we examine the effects of gabions (wire baskets filled with rocks used as dams) on vegetation...

As a greater number and diversity of high-quality vertebrate reference genomes become available, it is increasingly feasible to use these references to guide new draft assemblies for related species. Reference-guided assembly approaches may substantially increase the contiguity and completeness of a new genome using only low levels of genome coverage...

Groundwater quality in the Klamath Mountains (KLAM) study unit was investigated as part of the Priority Basin Project of the California Groundwater Ambient Monitoring and Assessment (GAMA) Program. The study unit is located in Del Norte, Humboldt, Shasta, Siskiyou, Tehama, and Trinity Counties. The GAMA Priority Basin Project is being...

Groundwater provides more than 40 percent of California’s drinking water. To protect this vital resource, the State of California created the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The Priority Basin Project of the GAMA Program provides a comprehensive assessment of the State’s groundwater quality and increases public access to...

The efficacy of Aquaflor (florfenicol; FFC) to control mortality caused by Streptococcus iniae in tilapia was evaluated under field conditions. The trial was initiated following presumptive diagnosis of S. iniae infection in a mixed group of fingerling (mean, 4.5 g) Nile Tilapia Oreochromis niloticus and a hybrid of Nile Tilapia×Blue...

The ongoing human H7N9 influenza infections highlight the threat of emerging avian influenza viruses. In 2011, an avian H3N8 influenza virus isolated from moribund New England harbour seals was shown to have naturally acquired mutations known to increase the transmissibility of highly pathogenic H5N1 influenza viruses. To elucidate the potential...

Data from a long-term capture-recapture program were used to assess the status and dynamics of populations of two long-lived, federally endangered catostomids in Upper Klamath Lake, Oregon. Lost River suckers (Deltistes luxatus) and shortnose suckers (Chasmistes brevirostris) have been captured and tagged with passive integrated transponder (PIT) tags during their...

Multibeam-echosounder data, collected during survey H12299 by the National Oceanic and Atmospheric Administration in a 162-square-kilometer area of Block Island Sound, northeast of Gardiners Island, New York, are used along with sediment samples and bottom photography, collected at 37 stations in this area by the U.S. Geological Survey during cruise...

We present a unique water-balance approach for modeling snowpack under historic, current and future climates throughout the Sierra Nevada Ecoregion. Our methodology uses a finer scale (270 m) than previous regional studies and incorporates cold-air pooling, an atmospheric process that sustains cooler temperatures in topographic depressions thereby mitigating snowmelt. Our...

The physiological condition of juvenile birds can be influenced by multiple ecological stressors, and few studies have concurrently considered the effects of environmental contaminants in combination with ecological attributes that can influence foraging conditions and prey availability. Using three temporally distinct indices of physiological condition, we compared the physiological response...