Method- and species-specific detection probabilities of fish occupancy in Arctic lakes: Implications for design and management
Trevor B. Haynes, Amanda E. Rosenberger, Mark S. Lindberg, Matthew Whitman, Joel A. Schmutz
2013, Canadian Journal of Fisheries and Aquatic Sciences (70) 1055-1062
Studies examining species occurrence often fail to account for false absences in field sampling. We investigate detection probabilities of five gear types for six fish species in a sample of lakes on the North Slope, Alaska. We used an occupancy modeling approach to provide estimates of detection probabilities for each...
Community-based water-quality monitoring in the Yukon River Basin and the Kuskokwim Watershed
Nicole M. Herman-Mercer
2013, Witness the Arctic (2)
The unique partnership between the USGS and the YRITWC provides mutual benefits by fostering outreach efforts that have been essential for community empowerment and by generating scientific data for prohibitively large and remote regions that would be challenging for USGS scientists to sample as robustly alone. The addition of a...
Input-form data for the U.S. Geological Survey assessment of the Devonian and Mississippian Bakken and Devonian Three Forks Formations of the U.S. Williston Basin Province, 2013
U.S. Geological Survey Bakken-Three Forks Assessment Team, Stephanie B. Gaswirth, Kristen R. Marra, Troy A. Cook, Ronald R. Charpentier, Donald L. Gautier, Debra K. Higley, Timothy R. Klett, Michael D. Lewan, Paul G. Lillis, Christopher J. Schenk, Marilyn E. Tennyson, Katherine J. Whidden
2013, Open-File Report 2013-1094
In 2013, the U.S. Geological Survey assessed the technically recoverable oil and gas resources of the Bakken and Three Forks Formations of the U.S. portion of the Williston Basin. The Bakken and Three Forks Formations were assessed as continuous and hypothetical conventional oil accumulations using a methodology similar to that...
Simulation of groundwater flow, effects of artificial recharge, and storage volume changes in the Equus Beds aquifer near the city of Wichita, Kansas well field, 1935–2008
Brian P. Kelly, Linda L. Pickett, Cristi V. Hansen, Andrew C. Ziegler
2013, Scientific Investigations Report 2013-5042
The Equus Beds aquifer is a primary water-supply source for Wichita, Kansas and the surrounding area because of shallow depth to water, large saturated thickness, and generally good water quality. Substantial water-level declines in the Equus Beds aquifer have resulted from pumping groundwater for agricultural and municipal needs, as well...
Water temperature and baseflow discharge of streams throughout the range of Rio Grande cutthroat trout in Colorado and New Mexico—2010 and 2011
Matthew P. Zeigler, Andrew S. Todd, Colleen A. Caldwell
2013, Open-File Report 2013-1051
This study characterized the thermal regime in a number of Colorado and New Mexico streams that contain populations of Rio Grande cutthroat trout (Oncorhynchus clarkii virginalis) and had no previous record of continual temperature records. When compared to Colorado’s water temperature criteria (Cold Tier 1), a portion of these populations...
Total nutrient and sediment loads, trends, yields, and nontidal water-quality indicators for selected nontidal stations, Chesapeake Bay Watershed, 1985–2011
Michael J. Langland, Joel D. Blomquist, Douglas Moyer, Kenneth Hyer, Jeffrey G. Chanat
2013, Open-File Report 2013-1052
The U.S. Geological Survey, in cooperation with Chesapeake Bay Program (CBP) partners, routinely reports long-term concentration trends and monthly and annual constituent loads for stream water-quality monitoring stations across the Chesapeake Bay watershed. This report documents flow-adjusted trends in sediment and total nitrogen and phosphorus concentrations for 31 stations in...
Differential expression profiles of microRNA in the little brown bat (Myotis lucifugus) associated with white nose syndrome affected and unaffected individuals
D.D. Iwanowicz, L. R. Iwanowicz, N.P. Hitt, T.L. King
2013, Open-File Report 2013-1099
First documented in New York State in 2006, white nose syndrome (WNS) quickly became the leading cause of mortality in hibernating bat species in the United States. WNS is caused by a psychrophilic fungus, Geomyces destructans. Clinical signs of this pathogen are expressed as a dusty white fungus predominately around...
Assessment of undiscovered oil resources in the Bakken and Three Forks Formations, Williston Basin Province, Montana, North Dakota, and South Dakota, 2013
Stephanie B. Gaswirth, Kristen R. Marra, Troy A. Cook, Ronald R. Charpentier, Donald L. Gautier, Debra K. Higley, Timothy R. Klett, Michael D. Lewan, Paul G. Lillis, Christopher J. Schenk, Marilyn E. Tennyson, Katherine J. Whidden
2013, Fact Sheet 2013-3013
Using a geology-based assessment methodology, the U.S. Geological Survey estimated mean undiscovered volumes of 7.4 billion barrels of oil, 6.7 trillion cubic feet of associated/dissolved natural gas, and 0.53 billion barrels of natural gas liquids in the Bakken and Three Forks Formations in the Williston Basin Province of Montana, North...
Air temperature, wind speed, and wind direction in the National Petroleum Reserve—Alaska and the Arctic National Wildlife Refuge, 1998–2011
Frank E. Urban, Gary D. Clow
2013, Open-File Report 2013-1063
This report provides air temperature, wind speed, and wind direction data collected on Federal lands in Arctic Alaska over the period August 1998 to July 2011 by the U.S. Department of the Interior's climate monitoring array, part of the Global Terrestrial Network for Permafrost. In addition to presenting data, this...
Review of selected global mineral industries in 2011 and an outlook to 2017
W. David Menzie, Yadira Soto-Viruet, Omayra Bermudez-Lugo, Philip M. Mobbs, Alberto Alexander Perez, Mowafa Taib, Susan Wacaster, Staff
2013, Open-File Report 2013-1091
This report reviews the world production of selected mineral commodities in 2011 and includes output projections (based on planned capacity expansions) through 2017. It also includes brief discussions of several issues that are of importance to the mineral sector, including the world economy, the availability of strategic minerals, significant company...
Estimates of future inundation of salt marshes in response to sea-level rise in and around Acadia National Park, Maine
Martha G. Nielsen, Robert W. Dudley
2013, Scientific Investigations Report 2012-5290
Salt marshes are ecosystems that provide many important ecological functions in the Gulf of Maine. The U.S. Geological Survey investigated salt marshes in and around Acadia National Park from Penobscot Bay to the Schoodic Peninsula to map the potential for landward migration of marshes using a static inundation model of...
Evidence for fluid-triggered slip in the 2009 Mount Rainier, Washington earthquake swarm
David R. Shelly, Seth C. Moran, Weston A. Thelen
2013, Geophysical Research Letters (40) 1506-1512
A vigorous swarm of over 1000 small, shallow earthquakes occurred 20–22 September 2009 beneath Mount Rainier, Washington, including the largest number of events ever recorded in a single day at Rainier since seismic stations were installed on the edifice in 1989. Many events were only clearly recorded on one or...
Outcrop control of basin-scale underpressure in the Raton Basin, Colorado and New Mexico
P. H. Nelson, N.J. Gianoutsos, L. O. Anna
2013, Mountain Geologist (50) 37-63
Mount St. Helens, 1980 to now—what’s going on?
Daniel Dzurisin, Carolyn L. Driedger, Lisa M. Faust
2013, Fact Sheet 2013-3014, version 1.1
Mount St. Helens seized the world’s attention in 1980 when the largest historical landslide on Earth and a powerful explosive eruption reshaped the volcano, created its distinctive crater, and dramatically modified the surrounding landscape. An enormous lava dome grew episodically in the crater until 1986, when the volcano became relatively...
Water temperatures in select nearshore environments of the Colorado River in Grand Canyon, Arizona, during the Low Steady Summer Flow experiment of 2000
William S. Vernieu, Craig R. Anderson
2013, Open-File Report 2013-1066
Water releases from Glen Canyon Dam, Arizona, are the primary determinant of streamflow, sediment transport, water quality, and aquatic and riparian habitat availability in the Colorado River downstream of the dam in Grand Canyon. The presence and operation of the dam have transformed the seasonally warm Colorado River into a...
Salmonids, stream temperatures, and solar loading--modeling the shade provided to the Klamath River by vegetation and geomorphology
William M. Forney, Christopher E. Soulard, C. Christopher Chickadel
2013, Scientific Investigations Report 2013-5022
The U.S. Geological Survey is studying approaches to characterize the thermal regulation of water and the dynamics of cold water refugia. High temperatures have physiological impacts on anadromous fish species. Factors affecting the presence, variability, and quality of thermal refugia are known, such as riverine and watershed processes, hyporheic flows,...
A new data set for estimating organic carbon storage to 3 m depth in soils of the northern circumpolar permafrost region
G. Hugelius, James G. Bockheim, P. Camill, B. Elberling, G. Grosse, J.W. Harden, Kevin Johnson, T. Jorgenson, C.D. Koven, P. Kuhry, G. Michaelson, U. Mishra, J. Palmtag, C.-L. Ping, J. O'Donnell, L. Schirrmeister, E.A.G. Schuur, Y. Sheng, L.C. Smith, J. Strauss, Z. Yu
2013, Earth System Science Data (5) 393-402
High-latitude terrestrial ecosystems are key components in the global carbon cycle. The Northern Circumpolar Soil Carbon Database (NCSCD) was developed to quantify stocks of soil organic carbon (SOC) in the northern circumpolar permafrost region (a total area of 18.7 × 106 km2). The NCSCD is a geographical information system (GIS)...
Differential regulation of sodium-potassium pump isoforms during smolt development and seawater exposure of Atlantic salmon
Stephen D. McCormick, Amy M. Regish, Arne K. Christensen, Björn Thrandur Björnsson
2013, Journal of Experimental Biology (216) 1142-1151
Freshwater and seawater isoforms of the alpha subunit of Na+/K+-ATPase (NKA) have previously been identified in gill ionocytes of Atlantic salmon (Salmo salar). In the present study we examine the abundance and cellular localization of these isoforms during the parr–smolt transformation, a developmental process that is preparatory for seawater entry....
Differential mercury transfer in the aquatic food web of a double basined lake associated with selenium and habitat
Marina Arcagni, Linda Campbell, Maria A. Arribere, Mark Marvin-DiPasquale, Andrea Rizzo, Sergio Ribeiro Guevara
2013, Science of the Total Environment (454-455) 170-180
Food web trophodynamics of total mercury (THg) and selenium (Se) were assessed for the double-basined ultraoligotrophic system of Lake Moreno, Patagonia. Each basin has differing proportions of littoral and pelagic habitats, thereby providing an opportunity to assess the importance of habitat (e.g. food web structure or benthic MeHg production) in...
Expression kinetics of key genes in the early innate immune response to Great Lakes viral hemorrhagic septicemia virus IVb infection in yellow perch (Perca flavescens)
Wendy Olson, Eveline Emmenegger, Jolene Glenn, Crystal Simchick, Jim Winton, Frederick Goetz
2013, Developmental and Comparative Immunology (41) 11-19
The recently discovered strain of viral hemorrhagic septicemia virus, VHSV-IVb, represents an example of the introduction of an extremely pathogenic rhabdovirus capable of infecting a wide variety of new fish species in a new host-environment. The goal of the present study was to delineate the expression kinetics of key genes...
Landsat ecosystem disturbance adaptive processing system (LEDAPS) algorithm description
Gail Schmidt, Calli B. Jenkerson, Jeffrey Masek, Eric Vermote, Feng Gao
2013, Open-File Report 2013-1057
The Landsat Ecosystem Disturbance Adaptive Processing System (LEDAPS) software was originally developed by the National Aeronautics and Space Administration–Goddard Space Flight Center and the University of Maryland to produce top-of-atmosphere reflectance from LandsatThematic Mapper and Enhanced Thematic Mapper Plus Level 1 digital numbers and to apply atmospheric corrections to generate...
Influence of temperature on viral hemorrhagic septicemia (Genogroup IVa) in Pacific herring, Clupea pallasii Valenciennes
P.K. Hershberger, M. K. Purcell, L.M. Hart, J.L. Gregg, R.L. Thompson, K.A. Garver, J. R. Winton
2013, Journal of Experimental Marine Biology and Ecology (444) 81-86
An inverse relationship between water temperature and susceptibility of Pacific herring (Clupea pallasii) to viral hemorrhagic septicemia, genogroup IVa (VHS) was indicated by controlled exposure studies where cumulative mortalities, viral shedding rates, and viral persistence in survivors were greatest at the coolest exposure temperatures. Among groups of specific pathogen-free (SPF)...
Simulating boreal forest carbon dynamics after stand-replacing fire disturbance: insights from a global process-based vegetation model
C. Yue, P. Ciais, S. Luyssaert, P. Cadule, J. Harden, J. Randerson, V. Bellassen, T. Wang, S.L. Piao, B. Poulter, N. Viovy
2013, Biogeosciences (10) 8233-8252
Stand-replacing fires are the dominant fire type in North American boreal forests. They leave a historical legacy of a mosaic landscape of different aged forest cohorts. This forest age dynamics must be included in vegetation models to accurately quantify the role of fire in the historical and current regional forest...
Emergence of MD type infectious hematopoietic necrosis virus in Washington State coastal steelhead trout
Rachel Breyta, Amelia Jones, Bruce Stewart, Ray Brunson, Joan Thomas, John Kerwin, Jim Bertolini, Sonia Mumford, Chris Patterson, Gael Kurath
2013, Diseases of Aquatic Organisms (104) 179-195
Infectious hematopoietic necrosis virus (IHNV) occurs in North America as 3 major phylogenetic groups designated U, M, and L. In coastal Washington State, IHNV has historically consisted of U genogroup viruses found predominantly in sockeye salmon Oncorhynchus nerka. M genogroup IHNV, which has host-specific virulence for rainbow and steelhead...
Dietary bioavailability of Cu adsorbed to colloidal hydrous ferric oxide
Daniel J. Cain, Marie-Noële Croteau, Christopher C. Fuller
2013, Environmental Science & Technology (47) 2869-2876
The dietary bioavailability of copper (Cu) adsorbed to synthetic colloidal hydrous ferric oxide (HFO) was evaluated from the assimilation of 65Cu by two benthic grazers, a gastropod and a larval mayfly. HFO was synthesized, labeled with 65Cu to achieve a Cu/Fe ratio comparable to that determined in naturally formed HFO,...
