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Page 153, results 3801 - 3825

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Not all publications have extents, not all extents are completely accurate
An evaluation of the reliability of plumage characters for sexing adult Ruddy Turnstones Arenaria interpres morinella during northward passage in eastern North America
Peter J. Fullagar, R. Terry Chesser, Humphrey P. Sitters, Christopher C. Davey, Lawrence J. Niles, Serguei Vyacheslavovich Drovetski, M. Nandadevi Cortes-Rodriguez
2022, Wader Study (129) 138-147
We used two datasets to investigate the reliability of plumage for sexing adult Ruddy Turnstones Arenaria interpres of the morinella subspecies during May and early June in Delaware Bay, on the Mid-Atlantic Coast of the United States (39.1202°N, 75.2479°W). We first examined 23 years of data on the capture and recapture of 1,818 individual...
Advances in coral immunity ‘omics in response to disease outbreaks
Nikki Traylor-Knowles, Andrew C. Baker, Kelsey M. Beavers, Neha Garg, Jeffrey R. Guyon, Aine C. Hawthorn, Nicholas J. MacKnight, Mónica Medina, Laura D. Mydlarz, Esther C. Peters, Julia Marie Stewart, Michael S. Studivan, Joshua D. Voss
2022, Frontiers in Marine Science (9)
Coral disease has progressively become one of the most pressing issues affecting coral reef survival. In the last 50 years, several reefs throughout the Caribbean have been severely impacted by increased frequency and intensity of disease outbreaks leading to coral death. A recent example of this is stony coral tissue...
Discovering hidden geothermal signatures using non-negative matrix factorization with customized k-means clustering
Velimir V. Vesselinov, Bulbul Ahmmed, Maruti K. Mudunuru, Jeff D. Pepin, Erick R. Burns, Drew L. Siler, Satish Karra, Richard S. Middleton
2022, Geothermics (106)
Discovery of hidden geothermal resources is challenging. It requires the mining of large datasets with diverse data attributes representing subsurface hydrogeological and geothermal conditions. The commonly used play fairway analysis approach typically incorporates subject-matter expertise to analyze regional data to estimate geothermal characteristics and favorability. We demonstrate an alternative approach...
Selecting auditory alerting stimuli for eagles on the basis of auditory evoked potentials
Benjamin Goller, Patrice Baumhardt, Ernesto Dominguez-Villegas, Todd E. Katzner, Esteban Fernández-Juricic, Jeffrey R. Lucas
2022, Conservation Physiology (10)
Development of wind energy facilities results in interactions between wildlife and wind turbines. Raptors, including bald and golden eagles, are among the species known to incur mortality from these interactions. Several alerting technologies have been proposed to mitigate this mortality by increasing eagle avoidance of wind energy facilities. However, there...
Physics-guided architecture (PGA) of LSTM models for uncertainty quantification in lake temperature modeling
Arka Daw, R. Quinn Thomas, Cayelan C. Carey, Jordan Read, Alison P. Appling, Anuj Karpatne
2022, Book chapter, Knowledge-guided machine learning: Accelerating discovery using scientific knowledge and data
This chapter focuses on meeting the need to produce neural network outputs that are physically consistent and also express uncertainties, a rare combination to date. It explains the effectiveness of physics-guided architecture - long-short-term-memory (PGA-LSTM) in achieving better generalizability and physical consistency over data collected from Lake Mendota in Wisconsin...
Heat budget of lakes
Martin Schmid, Jordan Read
2022, Book chapter, Encyclopedia of inland waters
This article gives an overview of the heat fluxes between lakes and their environment. The heat budget of most lakes is dominated by heat fluxes at the lake surface, especially shortwave radiation, incoming and outgoing longwave radiation, and the latent heat flux. The seasonality of these fluxes is the most...
Physics-guided neural networks (PGNN): An application in lake temperature modeling
Arka Daw, Anuj Karpatne, William Watkins, Jordan Read, Vipin Kumar
2022, Book chapter, Knowledge-guided machine learning: Accelerating discovery using scientific knowledge and data
This chapter introduces a framework for combining scientific knowledge of physics-based models with neural networks to advance scientific discovery. It explains termed physics-guided neural networks (PGNN), leverages the output of physics-based model simulations along with observational features in a hybrid modeling setup to generate predictions using a neural network architecture....
Physics-guided recurrent neural networks for predicting lake water temperature
Xiaowei Jia, Jared Willard, Anuj Karpatne, Jordan Read, Jacob Aaron Zwart, Michael Steinbach, Vipin Kumar
2022, Book chapter, Knowledge-guided machine learning: Accelerating discovery using scientific knowledge and data
This chapter presents a physics-guided recurrent neural network model (PGRNN) for predicting water temperature in lake systems. Standard machine learning (ML) methods, especially deep learning models, often require a large amount of labeled training samples, which are often not available in scientific problems due to the substantial human labor and...
Planetary-scale change to the biosphere signalled by global species translocations can be used to identify the Anthropocene
Mark A. Williams, Reinhold Leinfelder, Anthony D. Barnosky, Martin J Head, Francine M G McCarthy, Cearreta. Alejandro, Stephen J Himson, Rachael Holmes, Colin N. Waters, Jan Zalasiewicz, Simon Turner, Mary McGann, Elizabeth A. Hadly, M. Allison Stegner, Paul Michael Pilkington, Jérôme Kaiser, Juan Carlos Berrio, Ian P. Wilkinson, Jens Zinke, Kristine L. DeLong
2022, Palaeontology (65)
We examine three distinctive biostratigraphic signatures associated with: hunting and gathering, landscape domestication, and globalisation. All three signatures have significant fossil records of regional importance that can be correlated inter-regionally and help describe the developing pattern of human expansion and appropriation of resources. While none have individual first or last...
Daily surface temperatures for 185,549 lakes in the conterminous United States estimated using deep learning (1980–2020)
Jared D. Willard, Jordan Read, Simon Nemer Topp, Gretchen J. A. Hansen, Vipin Kumar
2022, Limnology & Oceanography: Letters (7) 287-301
The dataset described here includes estimates of historical (1980–2020) daily surface water temperature, lake metadata, and daily weather conditions for lakes bigger than 4 ha in the conterminous United States (n = 185,549), and also in situ temperature observations for a subset of lakes (n = 12,227). Estimates were generated using a long short-term memory...
Identifying nutrient sources and sinks to the South Platte River and Cherry Creek, Denver, CO, during low-flow conditions in 2019–2020
William A. Battaglin, Tanner William Chapin
2022, River Research and Applications (38) 1860-1883
Elevated concentrations and loads of nutrients in the South Platte River and Cherry Creek in Denver, Colorado, may have adverse effects on those streams and downstream water bodies, including increased production of algae, eutrophication, and decreased recreational opportunities. This article describes streamflow and concentrations and loads of nutrients for the...
Decision support for aquatic restoration based on species-specific responses to disturbance
James E. McKenna Jr., Catherine Riseng, Kevin Wehrly
2022, Ecology and Evolution (12)
Disturbances to aquatic habitats are not uniformly distributed within the Great Lakes and acute effects can be strongest in nearshore areas where both landscape and within lake effects can have strong influence. Furthermore, different fish species respond to disturbances in different ways. A means to identify...
Comparing imidacloprid, clothianidin, and azoxystrobin runoff from lettuce fields using a soil drench or treated seeds in the Salinas Valley, California
Emily Woodward, Michelle Hladik, Anson Main, Michael Cahn, James Orlando, Jennifer Teerlink
2022, Environmental Pollution (315)
Neonicotinoid insecticide use has increased over the last decade, including as agricultural seed treatments (application of chemical in a coating to the seed prior to planting). In California, multiple crops, including lettuce, can be grown using neonicotinoid treated seeds or receive a direct neonicotinoid soil application (drenching) at planting. Using...
Pleistocene–Holocene vicariance, not Anthropocene landscape change, explains the genetic structure of American black bear (Ursus americanus) populations in the American Southwest and northern Mexico
Matthew J. Gould, James W. Cain III, Todd C. Atwood, Larisa E. Harding, Heather E. Johnson, Dave P. Onorato, Frederic S. Winslow, Gary W. Roemer
2022, Ecology and Evolution (12)
The phylogeography of the American black bear (Ursus americanus) is characterized by isolation into glacial refugia, followed by population expansion and genetic admixture. Anthropogenic activities, including overharvest, habitat loss, and transportation infrastructure, have also influenced their landscape genetic structure. We describe the genetic structure...
Congruence among multiple indices of habitat preference for species facing human-induced rapid environmental change: A case study using the Brewer's sparrow
Max Carlin, Anna D. Chalfoun
2022, Ecological Society Bulletin (3)
Accurate evaluations of habitat preference are key to understanding optimal conditions for wildlife survival and reproduction. Habitat selection, however, usually is evaluated using a single index of preference, and congruence among multiple, relevant indices of preference is examined rarely.We assessed the concordance between...
Wave-driven hydrodynamic processes over fringing reefs with varying slopes, depths, and roughness: Implications for coastal protection
Mark L. Buckley, Ryan L. Lowe, Jeff E. Hansen, Ap R. Dongeren, Andrew Pomeroy, Curt Storlazzi, Dirk P. Rijnsdorp, Renan F. Silva, Stephanie Contardo, Rebecca H. Green
2022, JGR Oceans (127)
Wave breaking on the steep fore-reef slopes of shallow fringing reefs is effective at dissipating incident sea-swell waves prior to reaching reef shorelines. However, wave setup and free infragravity waves generated during the sea-swell breaking process are often the largest contributors to wave-driven water levels at the shoreline. Laboratory flume...
Fish carcass deposition to suppress invasive lake trout through hypoxia causes limited, non-target effects on benthic invertebrates in Yellowstone Lake
Michelle A. Briggs, Lindsey K. Albertson, Dominique R. Lujan, Lusha M. Tronstad, Hayley C. Glassic, Christopher S. Guy, Todd M. Koel
2022, Aquaculture, Fish and Fisheries (2) 470-483
Invasive species can have negative effects on native biodiversity and ecosystem function, and suppression is often required to minimize the effects. However, management actions to suppress invasive species may cause negative, unintended effects on non-target taxa. Across the United States, lake trout (Salvelinus namaycush) are invasive in many freshwater ecosystems,...
Monitoring offshore CO2 sequestration using marine CSEM methods; constraints inferred from field- and laboratory-based gas hydrate studies
Steven Constable, Laura A. Stern
2022, Energies (15)
Offshore geological sequestration of CO2 offers a viable approach for reducing greenhouse gas emissions into the atmosphere. Strategies include injection of CO2 into the deep-ocean or ocean-floor sediments, whereby depending on pressure–temperature conditions, CO2 can be trapped physically, gravitationally, or converted to CO2 hydrate. Energy-driven research continues to also advance CO2-for-CH4 replacement strategies in the...
Channel mapping of the Colorado River from Glen Canyon Dam to Lees Ferry in Glen Canyon National Recreation Area, Arizona
Matt Kaplinski, Joseph E. Hazel Jr., Paul E. Grams, Tom Gushue, Daniel D. Buscombe, Keith Kohl
2022, Open-File Report 2022-1057
Bathymetric and topographic data were collected from May 2013 to February 2016 along the 15.84-mile reach of the Colorado River spanning from Glen Canyon Dam to Lees Ferry in Glen Canyon National Recreation Area, Arizona. Channel bathymetry was mapped using multibeam and singlebeam echo sounders; subaerial topography was mapped using...
Are existing modeling tools useful to evaluate outcomes in mangrove restoration and rehabilitation projects? A minireview
Victor H. Rivera-Monroy, Xiaochen Zhao, Hongqing Wang, Zuo G. Xue
2022, Forests (13)
Ecosystem modeling is a critical process for understanding complex systems at spatiotemporal scales needed to conserve, manage, and restore ecosystem services (ESs). Although mangrove wetlands are sources of ESs worth billions of dollars, there is a lack of modeling tools. This is reflected in our lack of understanding of mangroves’...
Genetic structure and historic demography of endangered unarmoured threespine stickleback at southern latitudes signals a potential new management approach
Rachel Turba, Jonathan Q. Richmond, Sorel Fitz-Gibbon, Marco Morselli, Robert N. Fisher, Camm C. Swift, Gorgonio Ruiz-Campos, Adam R. Backlin, Chris Dellith, David K. Jacobs
2022, Molecular Ecology (31) 6515-6530
Habitat loss, flood control infrastructure, and drought have left most of southern California and northern Baja California's native freshwater fish near extinction, including the endangered unarmoured threespine stickleback (Gasterosteus aculeatus williamsoni). This subspecies, an unusual morph lacking the typical lateral bony plates of the G. aculeatus complex, occurs at arid southern latitudes...
Identifying key stressors driving biological impairment in freshwater streams in the Chesapeake Bay watershed, USA
Rosemary M. Fanelli, Matthew Joseph Cashman, Aaron J. Porter
2022, Environmental Management (70) 926-949
Biological communities in freshwater streams are often impaired by multiple stressors (e.g., flow or water quality) originating from anthropogenic activities such as urbanization, agriculture, or energy extraction. Restoration efforts in the Chesapeake Bay watershed, USA seek to improve biological conditions in 10% of freshwater tributaries and...
Industrial energy development decouples ungulate migration from the green wave
Ellen O. Aikens, Teal B. Wyckoff, Hall Sawyer, Matthew Kauffman
2022, Nature Ecology and Evolution (6) 1733-1741
The ability to freely move across the landscape to track the emergence of nutritious spring green-up (termed ‘green-wave surfing’) is key to the foraging strategy of migratory ungulates. Across the vast landscapes traversed by many migratory herds, habitats are being altered by development with unknown consequences for surfing. Using a...
Immunogenicity, safety, and anti-viral efficacy of a subunit SARS-CoV-2 vaccine candidate in captive black-footed ferrets (Mustela nigripes) and their susceptibility to viral challenge
Ariel Elizabeth Leon, Della Garelle, Airn Hartwig, Elizabeth Falendysz, Hon S. Ip, Julia S. Lankton, Tyler Tretten, Terry Spraker, Richard Bowen, Tonie E. Rocke
2022, Viruses (14)
A preliminary vaccination trial against the emergent pathogen, SARS-CoV-2, was completed in captive black-footed ferrets (Mustela nigripes; BFF) to assess safety, immunogenicity, and anti-viral efficacy. Vaccination and boosting of 15 BFF with purified SARS-CoV-2 S1 subunit protein produced a nearly 150-fold increase in mean antibody titers compared to pre-vaccination titers....
Absolute accuracy assessment of lidar point cloud using amorphous objects
Minsu Kim, Jason M. Stoker, Jeffrey Irwin, Jeffrey J. Danielson, Seonkyung Park
2022, Remote Sensing (14)
The accuracy assessment of airborne lidar point cloud typically estimates vertical accuracy by computing RMSEz (root mean square error of the z coordinate) from ground check points (GCPs). Due to the low point density of the airborne lidar point cloud, there is often not enough accurate semantic context to find...