Effectiveness of common fish screen materials to protect lamprey ammocoetes
Brien P. Rose, Matthew G. Mesa
2012, North American Journal of Fisheries Management (32) 597-603
Understanding the effects of irrigation diversions on populations of Pacific lampreyLampetra tridentata in the Columbia River basin is needed for their recovery. We tested the effectiveness of five common fish screen materials for excluding lamprey ammocoetes: interlock (IL), vertical bar (VB), perforated plate (PP), and 12-gauge and 14-gauge wire cloth (WC12)...
Survival and growth of juvenile Pacific lampreys tagged with passive integrated transponders (PIT) in freshwater and seawater
Matthew G. Mesa, Elizabeth S. Copeland, Helena E. Christiansen, Jacob L. Gregg, Sean R. Roon, Paul K. Hershberger
2012, Transactions of the American Fisheries Society (141) 1260-1268
Tagging methods are needed for both adult and juvenile life stages of Pacific lampreys Lampetra tridentata to better understand their biology and factors contributing to their decline. We developed a safe and efficient technique for tagging juvenile Pacific lampreys with passive integrated transponder (PIT) tags. We tested the short-term survival...
Costs of living for juvenile Chinook salmon (Oncorhynchus tshawytscha) in an increasingly warming and invaded world
Lauren M. Kuehne, Julian D. Olden, Jeffrey J. Duda
2012, Canadian Journal of Fisheries and Aquatic Sciences (69) 1621-1630
Rapid environmental change in freshwater ecosystems has created a need to understand the interactive effects of multiple stressors, with temperature and invasive predators identified as key threats to imperiled fish species. We tested the separate and interactive effects of water temperature and predation by non-native smallmouth bass (Micropterus dolomieu) on...
Spatial genetic structure and asymmetrical gene flow within the Pacific walrus
Sarah A. Sonsthagen, Chadwick V. Jay, Anthony S. Fischbach, George K. Sage, Sandra L. Talbot
2012, Journal of Mammalogy (93) 1512-1524
Pacific walruses (Odobenus rosmarus divergens) occupying shelf waters of Pacific Arctic seas migrate during spring and summer from 3 breeding areas in the Bering Sea to form sexually segregated nonbreeding aggregations. We assessed genetic relationships among 2 putative breeding populations and 6 nonbreeding aggregations. Analyses of mitochondrial DNA (mtDNA) control...
Burial increases seed longevity of two Artemisia tridentata (Asteraceae) subspecies
Upekala C. Wijayratne, David A. Pyke
2012, American Journal of Botany (99) 438-447
Premise of the study: Seed longevity and persistence in soil seed banks may be especially important for population persistence in ecosystems where opportunities for seedling establishment and disturbance are unpredictable. The fire regime, an important driver of population dynamics in sagebrush steppe ecosystems, has been altered by exotic annual grass...
Use of ASTER and MODIS thermal infrared data to quantify heat flow and hydrothermal change at Yellowstone National Park
R. Greg Vaughan, Laszlo P. Keszthelyi, Jacob B. Lowenstern, Cheryl Jaworowski, Henry Heasler
2012, Journal of Volcanology and Geothermal Research (233-234) 72-89
The overarching aim of this study was to use satellite thermal infrared (TIR) remote sensing to monitor geothermal activity within the Yellowstone geothermal area to meet the missions of both the U.S. Geological Survey and the Yellowstone National Park Geology Program. Specific goals were to: 1) address the challenges...
The Midwest Stream Quality Assessment
Peter C. Van Metre, Jeffrey W. Frey, Ellen Tarquinio
2012, Fact Sheet 2012-3124
In 2013, the U.S. Geological Survey (USGS) National Water-Quality Assessment Program (NAWQA) and USGS Columbia Environmental Research Center (CERC) will be collaborating with the U.S. Environmental Protection Agency (EPA) National Rivers and Streams Assessment (NRSA) to assess stream quality across the Midwestern United States. The sites selected for this study...
Casual instrument corrections for short-period and broadband seismometers
Matthew M. Haney, John Power, Michael West, Paul Michaels
2012, Seismological Research Letters (83) 834-845
Of all the filters applied to recordings of seismic waves, which include source, path, and site effects, the one we know most precisely is the instrument filter. Therefore, it behooves seismologists to accurately remove the effect of the instrument from raw seismograms. Applying instrument corrections allows analysis of the seismogram...
Time-lapse camera observations of gas piston activity at Pu‘u ‘Ō‘ō, Kīlauea volcano, Hawai‘i
Tim R. Orr, James Rea
2012, Bulletin of Volcanology (74) 2353-2362
Gas pistoning is a type of eruptive behavior described first at Kīlauea volcano and characterized by the (commonly) cyclic rise and fall of the lava surface within a volcanic vent or lava lake. Though recognized for decades, its cause continues to be debated, and determining why and when it occurs...
Carbon dioxide and hydrogen sulfide degassing and cryptic thermal input to Brimstone Basin, Yellowstone National Park, Wyoming
D. Bergfeld, William C. Evans, J. B. Lowenstern, S. Hurwitz
2012, Chemical Geology (330-331) 233-243
Brimstone Basin, a remote area of intense hydrothermal alteration a few km east of the Yellowstone Caldera, is rarely studied and has long been considered to be a cold remnant of an ancient hydrothermal system. A field campaign in 2008 confirmed that gas emissions from the few small vents were...
Detecting hidden volcanic explosions from Mt. Cleveland Volcano, Alaska with infrasound and ground-couples airwaves
Slivio De Angelis, David Fee, Matthew Haney, David Schneider
2012, Geophysical Research Letters (39)
In Alaska, where many active volcanoes exist without ground-based instrumentation, the use of techniques suitable for distant monitoring is pivotal. In this study we report regional-scale seismic and infrasound observations of volcanic activity at Mt. Cleveland between December 2011 and August 2012. During this period, twenty explosions were detected by...
Roles of inflammatory caspases during processing of zebrafish interleukin-1β in Francisella noatunensis infection
Lucia N. Vojtech, Nichole Scharping, James C. Woodson, John D. Hansen
2012, Infection and Immunity (80) 2878-2885
The interleukin-1 family of cytokines are essential for the control of pathogenic microbes but are also responsible for devastating autoimmune pathologies. Consequently, tight regulation of inflammatory processes is essential for maintaining homeostasis. In mammals, interleukin-1 beta (IL-1β) is primarily regulated at two levels, transcription and processing. The main pathway for...
Degassing of Cl, F, Li and Be during extrusion and crystallization of the rhyolite dome at Volcán Chaitén, Chile during 2008 and 2009
Jacob B. Lowenstern, Heather Bleick, Jorge A. Vazquez, Jonathan M. Castro, Peter B. Larson
2012, Bulletin of Volcanology (74) 2303-2319
We investigated the distribution of Cl, F, Li, and Be in pumices, obsidians, and crystallized dome rocks at Chaitén volcano in 2008–2009 in order to explore the behavior of these elements during explosive and effusive volcanic activity. Electron and ion microprobe analyses of matrix and inclusion glasses from pumice, obsidian,...
Shallow stratigraphic control on pockmark distribution in north temperate estuaries
Laura L. Brothers, Joseph T. Kelley, Daniel F. Belknap, Walter A. Barnhardt, Brian D. Andrews, Christine Legere, John E. Hughes Clarke
2012, Marine Geology (329-331) 34-45
Pockmark fields occur throughout northern North American temperate estuaries despite the absence of extensive thermogenic hydrocarbon deposits typically associated with pockmarks. In such settings, the origins of the gas and triggering mechanism(s) responsible for pockmark formation are not obvious. Nor is it known why pockmarks proliferate in this region but...
Production and characterization of monoclonal antibodies to IgM of Pacific herring (Clupea pallasii)
Maureen K. Purcell, Erin S. Bromage, Jessica Silva, John D. Hansen, Samantha M. Badil, James C. Woodson, Paul K. Hershberger
2012, Fish and Shellfish Immunology (33) 552-558
Pacific herring (Clupea pallasii) have a central role in the North Pacific ecosystem as a forage fish species and are natural reservoirs of several important finfish pathogens, including Viral hemorrhagic septicemia virus (VHSV). Here, we report the identification of the gene encoding the immunoglobulin mu (IgM) heavy chain, as well...
Thermal maturity map of Devonian shale in the Illinois, Michigan, and Appalachian basins of North America
Joseph A. East, Christopher S. Swezey, John E. Repetski, Daniel O. Hayba
2012, Scientific Investigations Map 3214
Much of the oil and gas in the Illinois, Michigan, and Appalachian basins of eastern North America is thought to be derived from Devonian shale that is within these basins (for example, Milici and others, 2003; Swezey, 2002, 2008, 2009; Swezey and others, 2005, 2007). As the Devonian strata were...
Hydrate morphology: Physical properties of sands with patchy hydrate saturation
S. Dai, J.C. Santamarina, William F. Waite, T.J. Kneafsey
2012, Journal of Geophysical Research B: Solid Earth (117) B11205
The physical properties of gas hydrate-bearing sediments depend on the volume fraction and spatial distribution of the hydrate phase. The host sediment grain size and the state of effective stress determine the hydrate morphology in sediments; this information can be used to significantly constrain estimates of the physical properties of...
Estimated probability of arsenic in groundwater from bedrock aquifers in New Hampshire, 2011
Joseph D. Ayotte, Matthew Cahillane, Laura Hayes, Keith W. Robinson
2012, Scientific Investigations Report 2012-5156
Probabilities of arsenic occurrence in groundwater from bedrock aquifers at concentrations of 1, 5, and 10 micrograms per liter (µg/L) were estimated during 2011 using multivariate logistic regression. These estimates were developed for use by the New Hampshire Environmental Public Health Tracking Program. About 39 percent of New Hampshire bedrock...
Simulated effects of hydrologic, water quality, and land-use changes of the Lake Maumelle watershed, Arkansas, 2004–10
Rheannon M. Hart, W. Reed Green, Drew A. Westerman, James C. Petersen, Jeanne L. DeLanois
2012, Scientific Investigations Report 2012-5246
Lake Maumelle, located in central Arkansas northwest of the cities of Little Rock and North Little Rock, is one of two principal drinking-water supplies for the Little Rock, and North Little Rock, Arkansas, metropolitan areas. Lake Maumelle and the Maumelle River (its primary tributary) are more pristine than most other...
Seasonal variability in the surface sediments of Mobile Bay, Alabama, recorded by geochemistry and foraminifera, 2009–2010
D.K. Umberger, L.E. Osterman, C.G. Smith, J. Frazier, K.A. Richwine
2012, Data Series 733
A study was undertaken in order to document and quantify recent environmental change in Mobile Bay, Alabama. The study was part of the Northern Gulf of Mexico (NGOM) Ecosystem Change and Hazard Susceptibility project, a regional project funded by the Coastal and Marine Geology Program to understand how natural forcings...
Bird use of fields treated postharvest with two types of flooding in Tulare Basin, California
Joseph P. Fleskes, Daniel A. Skalos, Melissa A. Farinha
2012, Journal of Fish and Wildlife Management (3) 164-174
We surveyed birds on grain and non-grain fields in the Tulare Basin of California treated post-harvest with two types of flooding that varied in duration and depth of water applied (Flooded-type fields [FLD]: 1 week; Irrigated-type fields [IRG]: <1-15 cm water for <1 week at a...
Estimation of speciated and total mercury dry deposition at monitoring locations in eastern and central North America
L. Zhang, P. Blanchard, D.A. Gay, E.M. Prestbo, M.R. Risch, D. Johnson, J. Narayan, R. Zsolway, T.M. Holsen, E. K. Miller, M.S. Castro, J.A. Graydon, Louis, J. Dalziel
2012, Atmospheric Chemistry and Physics (12) 4327-4340
Dry deposition of speciated mercury, i.e., gaseous oxidized mercury (GOM), particulate-bound mercury (PBM), and gaseous elemental mercury (GEM), was estimated for the year 2008–2009 at 19 monitoring locations in eastern and central North America. Dry deposition estimates were obtained by combining monitored two- to four-hourly speciated ambient concentrations with modeled...
Canada Basin revealed
David C. Mosher, John Shimeld, Deborah R. Hutchinson, D Chian, Nina Lebedeva-Ivanova, Ruth Jackson
2012, Conference Paper, Arctic Technology Conference: Challenges for today, opportunities for tomorrow
More than 15,000 line-km of new regional seismic reflection and refraction data in the western Arctic Ocean provide insights into the tectonic and sedimentologic history of Canada Basin, permitting development of new geologic understanding in one of Earth's last frontiers. These new data support a rotational opening model for southern...
Bats, mines, and citizen science in the Rockies: Volunteers make a difference in Colorado
Mark A. Hayes
2012, BATS Magazine (30) 10-11
Biologists at the Colorado Division of Wildlife faced a big problem back in 1990. They wanted to protect important bat roosts in the state’s abandoned mines, but first they had to find the bats. Colorado’s rich mining history had left more than 23,000 old mines scattered across the landscape, few...
The genetic structure of a relict population of wood frogs
Rick Scherer, Erin Muths, Barry Noon, Sara Oyler-McCance
2012, Conservation Genetics (13) 1521-1530
Habitat fragmentation and the associated reduction in connectivity between habitat patches are commonly cited causes of genetic differentiation and reduced genetic variation in animal populations. We used eight microsatellite markers to investigate genetic structure and levels of genetic diversity in a relict population of wood frogs (Lithobates sylvatica) in Rocky...
