Integrating multiple data sources in species distribution modeling: A framework for data fusion
Krishna Pacifici, Brian J. Reich, David A.W. Miller, Beth Gardner, Glenn E. Stauffer, Susheela Singh, Alexa McKerrow, Jaime A. Collazo
2017, Ecology (98) 840-850
The last decade has seen a dramatic increase in the use of species distribution models (SDMs) to characterize patterns of species’ occurrence and abundance. Efforts to parameterize SDMs often create a tension between the quality and quantity of data available to fit models. Estimation methods that integrate both standardized and...
When perception reflects reality: Non-native grass invasion alters small mammal risk landscapes and survival
Joseph P. Ceradnini, Anna D. Chalfoun
2017, Ecology and Evolution (7) 1823-1835
Modification of habitat structure due to invasive plants can alter the risk landscape for wildlife by, for example, changing the quality or availability of refuge habitat. Whether perceived risk corresponds with actual fitness outcomes, however, remains an important open question. We simultaneously measured how habitat changes due to a common...
Divergent surface and total soil moisture projections under global warming
Alexis Berg, Justin Sheffield, Paul C.D. Milly
2017, Geophysical Research Letters (44) 236-244
Land aridity has been projected to increase with global warming. Such projections are mostly based on off-line aridity and drought metrics applied to climate model outputs but also are supported by climate-model projections of decreased surface soil moisture. Here we comprehensively analyze soil moisture projections from the Coupled Model Intercomparison...
LANDFIRE 2015 Remap – Utilization of Remotely Sensed Data to Classify Existing Vegetation Type and Structure to Support Strategic Planning and Tactical Response
Joshua J. Picotte, Jordan Long, Birgit Peterson, Kurtis Nelson
2017, Earthzine (March 2017)
The LANDFIRE Program produces national scale vegetation, fuels, fire regimes, and landscape disturbance data for the entire U.S. These data products have been used to model the potential impacts of fire on the landscape [1], the wildfire risks associated with land and resource management [2, 3], and those near population centers...
Managing native predators: Evidence from a partial removal of raccoons (Procyon lotor) on the Outer Banks of North Carolina, USA
Jessica J. Stocking, Theodore R. Simons, Arielle W. Parsons, Allan F. O’Connell
2017, Waterbirds (40) 10-18
Raccoons (Procyon lotor) are important predators of ground-nesting species in coastal systems. They have been identified as a primary cause of nest failure for the American Oystercatcher (Haematopus palliatus) throughout its range. Concerns over the long-term effects of raccoon predation and increased nest success following a hurricane inspired a mark-resight...
Evidence for early life in Earth’s oldest hydrothermal vent precipitates
Matthew S. Dodd, Dominic Papineau, Tor Grenne, John F. Slack, Martin Rittner, Franco Pirajno, Jonathan O’Neil, Crispin T.S. Little
2017, Nature (543) 60-64
Although it is not known when or where life on Earth began, some of the earliest habitable environments may have been submarine-hydrothermal vents. Here we describe putative fossilized microorganisms that are at least 3,770 million and possibly 4,280 million years old in ferruginous sedimentary rocks, interpreted as seafloor-hydrothermal vent-related precipitates,...
The basis function approach for modeling autocorrelation in ecological data
Trevor J. Hefley, Kristin M. Broms, Brian M. Brost, Frances E. Buderman, Shannon L. Kay, Henry Scharf, John Tipton, Perry J. Williams, Mevin Hooten
2017, Ecology (98) 632-646
Analyzing ecological data often requires modeling the autocorrelation created by spatial and temporal processes. Many seemingly disparate statistical methods used to account for autocorrelation can be expressed as regression models that include basis functions. Basis functions also enable ecologists to modify a wide range of existing ecological models in order...
Northern bobwhite breeding season ecology on a reclaimed surface mine
Jarred M. Brooke, Evan P. Tanner, David C. Peters, Ashley M. Tanner, Craig A. Harper, Patrick D. Keyser, Joseph D. Clark, John J. Morgan
2017, Journal of Wildlife Management (81) 73-85
Surface coal mining and subsequent reclamation of surface mines have converted large forest areas into early successional vegetative communities in the eastern United States. This reclamation can provide a novel opportunity to conserve northern bobwhite (Colinus virginianus). We evaluated the influence of habitat management activities on nest survival, nest-site selection,...
CO2 diffusion into pore spaces limits weathering rate of an experimental basalt landscape
Joost van Haren, Katerina Dontsova, Greg A. Barron-Gafford, Peter A. Troch, Jon Chorover, Stephen B. DeLong, David D. Breshears, Travis E. Huxman, Jon D. Pelletier, Scott Saleska, Xubin Zeng, Joaquin Ruiz
2017, Geology (45) 203-206
Basalt weathering is a key control over the global carbon cycle, though in situ measurements of carbon cycling are lacking. In an experimental, vegetation-free hillslope containing 330 m3 of ground basalt scoria, we measured real-time inorganic carbon dynamics within the porous media and seepage flow. The hillslope carbon flux (0.6–5.1 mg C m–2 h–1)...
Mercury exposure may influence fluctuating asymmetry in waterbirds
Garth Herring, Collin A. Eagles-Smith, Joshua T. Ackerman
2017, Environmental Toxicology and Chemistry (36) 1599-1605
Variation in avian bilateral symmetry can be an indicator of developmental instability in response to a variety of stressors, including environmental contaminants. The authors used composite measures of fluctuating asymmetry to examine the influence of mercury concentrations in 2 tissues on fluctuating asymmetry within 4 waterbird species. Fluctuating asymmetry increased...
Broadband seismic noise attenuation versus depth at the Albuquerque Seismological Laboratory
Charles R. Hutt, Adam T. Ringler, Lind Gee
2017, Bulletin of the Seismological Society of America (107) 1402-1412
Seismic noise induced by atmospheric processes such as wind and pressure changes can be a major contributor to the background noise observed in many seismograph stations, especially those installed at or near the surface. Cultural noise such as vehicle traffic or nearby buildings with air handling equipment also contributes to...
Intraspecific functional diversity of common species enhances community stability
Connor M. Wood, Shawn T. McKinney, Cynthia S. Loftin
2017, Ecology and Evolution (7) 1553-1560
Common species are fundamental to the structure and function of their communities and may enhance community stability through intraspecific functional diversity (iFD). We measured among-habitat and within-habitat iFD (i.e., among- and within-plant community types) of two common small mammal species using stable isotopes and functional trait dendrograms, determined whether iFD...
Surface geophysical methods for characterising frozen ground in transitional permafrost landscapes
Martin A. Briggs, Seth Campbell, Jay Nolan, Michelle Ann Walvoord, Dimitrios Ntarlagiannis, Frederick D. Day-Lewis, John W. Lane Jr.
2017, Permafrost and Periglacial Processes (28) 52-65
The distribution of shallow frozen ground is paramount to research in cold regions, and is subject to temporal and spatial changes influenced by climate, landscape disturbance and ecosystem succession. Remote sensing from airborne and satellite platforms is increasing our understanding of landscape-scale permafrost distribution, but typically lacks the resolution to...
Recalibration of the Mars Science Laboratory ChemCam instrument with an expanded geochemical database
Samuel M. Clegg, Roger C. Wiens, Ryan B. Anderson, Olivier Forni, Jens Frydenvang, Jeremie Lasue, Agnes Cousin, Valerie Payre, Tommy Boucher, M. Darby Dyar, Scott M. McLennan, Richard V. Morris, Trevor G. Graff, Stanley A Mertzman, Bethany L. Ehlmann, Ines Belgacem, Horton E. Newsom, Ben C. Clark, Noureddine Melikechi, Alissa Mezzacappa, Rhonda E. McInroy, Ronald Martinez, Patrick J. Gasda, Olivier Gasnault, Sylvestre Maurice
2017, Spectrochimica Acta Part B: Atomic Spectroscopy (129) 64-85
The ChemCam Laser-Induced Breakdown Spectroscopy (LIBS) instrument onboard the Mars Science Laboratory (MSL) rover Curiosity has obtained > 300,000 spectra of rock and soil analysis targets since landing at Gale Crater in 2012, and the spectra represent perhaps the largest publicly-available LIBS datasets. The compositions of the major elements, reported as...
Toppling analysis of the Echo Cliffs precariously balanced rock
Swetha Veeraraghavan, Kenneth W. Hudnut, Swaminathan Krishnan
2017, Bulletin of the Seismological Society of America (107) 72-84
Toppling analysis of a precariously balanced rock (PBR) can provide insight into the nature of ground motion that has not occurred at that location in the past and, by extension, can constrain peak ground motions for use in engineering design. Earlier approaches have targeted 2D models of the rock or...
Autumn olive (Elaeagnus umbellata) presence and proliferation on former surface coal mines in Eastern USA
Adam J. Oliphant, R.H. Wynne, Carl E. Zipper, W. Mark Ford, P. F. Donovan, Jing Li
2017, Biological Invasions (19) 179-195
Invasive plants threaten native plant communities. Surface coal mines in the Appalachian Mountains are among the most disturbed landscapes in North America, but information about land cover characteristics of Appalachian mined lands is lacking. The invasive shrub autumn olive (Elaeagnus umbellata) occurs on these sites and interferes with...
Estimating regional-scale permeability–depth relations in a fractured-rock terrain using groundwater-flow model calibration
Ward E. Sanford
2017, Hydrogeology Journal (25) 405-419
The trend of decreasing permeability with depth was estimated in the fractured-rock terrain of the upper Potomac River basin in the eastern USA using model calibration on 200 water-level observations in wells and 12 base-flow observations in subwatersheds. Results indicate that permeability at the 1–10 km scale (for groundwater flowpaths) decreases...
Land-use change and managed aquifer recharge effects on the hydrogeochemistry of two contrasting atoll island aquifers, Roi-Namur Island, Republic of the Marshall Islands
Mehrdad Hejazian, Jason J. Gurdak, Peter W. Swarzenski, Kingsley Odigie, Curt D. Storlazzi
2017, Applied Geochemistry (80) 58-71
Freshwater resources on low-lying atoll islands are highly vulnerable to climate change and sea-level rise. In addition to rainwater catchment, groundwater in the freshwater lens is a critically important water resource on many atoll islands, especially during drought. Although many atolls have high annual rainfall rates, dense natural vegetation...
San Francisco Bay living shorelines: Restoring Eelgrass and Olympia Oysters for habitat and shore protection
Katharyn E. Boyer, Chela Zabin, Susan De La Cruz, Edwin D. Grosholz, Michelle Orr, Jeremy Lowe, Marilyn Latta, Jen Miller, Stephanie Kiriakopolos, Cassie Pinnell, Damien Kunz, Julien Moderan, Kevin Stockmann, Geana Ayala, Robert Abbott, Rena Obernolte
2017, Book chapter, Living shorelines: The science and management of nature-based coastal protection
Living shorelines projects utilize a suite of sediment stabilization and habitat restoration techniques to maintain or build the shoreline, while creating habitat for a variety of species, including invertebrates, fish, and birds (see National Oceanic and Atmospheric Administration [NOAA] 2015 for an overview). The term “living shorelines” denotes provision of...
Rapid carbon loss and slow recovery following permafrost thaw in boreal peatlands
Miriam C. Jones, Jennifer W. Harden, Jonathan A. O’Donnell, Kristen L. Manies, M. Torre Jorgenson, Claire C. Treat, Stephanie Ewing
2017, Global Change Biology (23) 1109-1127
Permafrost peatlands store one-third of the total carbon (C) in the atmosphere and are increasingly vulnerable to thaw as high-latitude temperatures warm. Large uncertainties remain about C dynamics following permafrost thaw in boreal peatlands. We used a chronosequence approach to measure C stocks in forested permafrost plateaus (forest) and thawed...
Unusual geologic evidence of coeval seismic shaking and tsunamis shows variability in earthquake size and recurrence in the area of the giant 1960 Chile earthquake
M. Cisternas, E Garrett, Robert L. Wesson, T. Dura, L. L Ely
2017, Marine Geology (385) 101-113
An uncommon coastal sedimentary record combines evidence for seismic shaking and coincident tsunami inundation since AD 1000 in the region of the largest earthquake recorded instrumentally: the giant 1960 southern Chile earthquake (Mw 9.5). The record reveals significant variability in the size and recurrence of megathrust earthquakes and ensuing tsunamis...
Solving for source parameters using nested array data: A case study from the Canterbury, New Zealand earthquake sequence
Corrie Neighbors, Elizabeth S. Cochran, Kenneth Ryan, Anna E. Kaiser
2017, Pure and Applied Geophysics (174) 875-893
The seismic spectrum can be constructed by assuming a Brune spectral model and estimating the parameters of seismic moment (M0), corner frequency (fc), and high-frequency site attenuation (κ). Using seismic data collected during the 2010–2011 Canterbury, New Zealand, earthquake sequence, we apply the non-linear...
In-well time-of-travel approach to evaluate optimal purge duration during low-flow sampling of monitoring wells
Philip T. Harte
2017, Environmental Earth Sciences (76) 1-13
A common assumption with groundwater sampling is that low (<0.5 L/min) pumping rates during well purging and sampling captures primarily lateral flow from the formation through the well-screened interval at a depth coincident with the pump intake. However, if the intake is adjacent to a low hydraulic conductivity part of the...
Relations of alpine plant communities across environmental gradients: Multilevel versus multiscale analyses
George P. Malanson, Dale L. Zimmerman, Mitch Kinney, Daniel B. Fagre
2017, Annals of the Association of American Geographers (107) 41-53
Alpine plant communities vary, and their environmental covariates could influence their response to climate change. A single multilevel model of how alpine plant community composition is determined by hierarchical relations is compared to a separate examination of those relations at different scales. Nonmetric multidimensional scaling of species cover for plots...
South Polar Skua breeding populations in the Ross Sea assessed from demonstrated relationship with Adélie Penguin numbers
Deborah J. Wilson, Phil O’B. Lyver, Terry C. Greene, Amy L. Whitehead, Katie M. Dugger, Brian J. Karl, James R. F. Barringer, Roger McGarry, Annie M. Pollard, David G. Ainley
2017, Polar Biology (40) 577-592
In the Ross Sea region, most South Polar Skuas (Stercorarius maccormicki) nest near Adélie Penguin (Pygoscelis adeliae) colonies, preying and scavenging on fish, penguins, and other carrion. To derive a relationship to predict skua numbers from better-quantified penguin numbers, we used distance sampling to estimate breeding...
