Evaluation of turbidity corrections for EXO fluorescent dissolved organic matter (fDOM) sensors
Jacob Fleck, Tim James Baxter, Angela Hansen
2026, Open-File Report 2026-1063
Executive Summary The use of field-deployable fluorescence sensors to better understand dissolved organic matter concentrations and composition has grown immensely in recent years. Applications of these sensors to critical monitoring efforts have also grown, encompassing post-fire monitoring, wastewater tracking, and use as a proxy for various contaminants. Despite the growth, it...
Working group on American Eel (WGAMEEL; outputs from 2024 meeting)
Julien April, Kristen A. Anstead, Philippe Brodeur, David K. Cairns, Martin Castonguay, Matthew Cieri, Brian Jessop, Amelie D'Astous, Shelly Denny, Jean-Francois Dumont, Sheila Eyler, Marten A. Koops, Laura Lee, Louis Landry-Massicote, Robby Maxwell, Thomas Pratt, Scott M. Reid, Scott Roloson, Scott L. Schlueter, Shawn Snyder, John A. Young
Kristen A. Anstead, Thomas Pratt, editor(s)
2026, Report
The Working Group on American Eel (WGAMEEL) met virtually three times in 2022-2024 to address the five Terms of Reference (ToRs) of its three-year term. The first two ToRs tasked WGAMEEL with listing and evaluating data on American eel landings, abundance indices, and spatial and habitat data and also...
A framework for integrating spatiotemporal deep learning methods with landsat for annual land cover and impervious surface mapping
Rylie Fleckenstein, Danika Fay Wellington, Suming Jin, Heather J. Tollerud, Jesslyn F. Brown, Jon Dewitz, Neal J. Pastick, Christopher P. Barber, Austin O'Brien, Mark Spanier
2026, Remote Sensing of Environment (338)
Land cover information is essential for understanding Earth’s surface dynamics and how vegetation, water, soil, climate, and terrain interact. The National Land Cover Database (NLCD) has been the authoritative source for consistent U.S. land cover mapping. To extend NLCD’s temporal resolution and reduce production latency, we developed the...
Stochastic within-host dynamics and climate-sensitive traits generate predictable patterns of variation in disease outcomes
Andrew Carlino, Malina Mariko Loeher, David James Páez, Paul Hershberger, Nathan Wolf, Joseph R. Mihaljevic
2026, Philosophical Transactions of the Royal Society, Series B (381)
Understanding how climatic variables impact host-pathogen relationships in temperature-sensitive ectothermic host organisms is crucial under global change. Few studies have explored how temperature gradients generate inter-individual variation in epidemiological traits like host susceptibility or pathogen replication. Here, we develop a mathematical model to explore a novel hypothesis: stochastic within-host dynamics...
Fragmentation as a population rate-changer: A field experiment
James D. Nichols, James E. Hines, Robert L. Hinz, Janet Hinz
2026, Ecology (107)
Experimental and observational studies of effects of fragmentation on biodiversity and population dynamics have produced mixed results, with some reviews concluding strong evidence of negative effects and others concluding small positive effects. In addition, many factors (e.g., interspecific interactions, edge effects, nutrient cycling) have been identified as potential explanations underlying...
Measuring storm waves and water levels from a fixed structure with a rapidly deployable oceanographic radar
Jenna A. Brown, Bryce J McClenney, Patrick J. Dickhudt
2026, Conference Paper
A new oceanographic radar instrument package was developed by the U.S. Geological Survey (USGS) to measure storm waves and water levels in the nearshore, capable of being deployed rapidly and transmitting data in near real-time. To test the performance and accuracy of the sensor, multiple years of data were collected...
Who needs closure? Estimating abundance with a Markovian availability model for geographically open removal sampling
Russell W. Perry, Adam C. Pope, A. Noble Hendrix, Joseph E. Kirsch, Bryan G. Matthias, Michael J. Dodrill
2026, Ecology (107)
Removal sampling is an important method for estimating abundance, but nearly all removal models assume closure during sampling. Yet, closure may be difficult to assume, evaluate, or enforce in many settings. To address situations where populations are geographically open between each removal sample, we incorporated a Markovian...
The impacts of co-circulating pathogens in Pacific herring depend on interactions between viral life-cycle traits and transmission parameters, highlighting interdependencies between pathogen epizootics
David James Páez, Courtney Ann Grady, Jacob L. Gregg, William N. Batts, Shayla Ferreiro-Luce, V. L. Herron, Malina Mariko Loeher, Sarah Williamson, Paul Hershberger
2026, Philosophical Transactions of the Royal Society, Series B (381)
The average host susceptibility decreases as the epizootic progresses because easily infected hosts are first removed from the population. While host susceptibility is pathogen-specific, it is likely that host susceptibility is correlated between different pathogens, so that co-circulating pathogens may have reciprocal impacts on their epidemics. However, despite well-documented examples...
Comparison of nonlethal techniques as indicators of lipid content in Lake Whitefish
Tyler Reid Funnell, Jenus Shrestha, Rachel R. Leads, Christopher M. Holbrook, Koji Sano, Cheryl A. Murphy
2026, Transactions of the American Fisheries Society
ObjectiveEnergetic reserves are important indicators of the relative health of fish and fish populations. Body condition indices that relate fish weight to length are commonly used as quick, noninvasive methods for approximating lipid content and condition. A microwave meter (i.e., fat meter or energy meter) is a noninvasive method found...
From understanding to action: Integrating new and old methodologies to manage marine infectious disease
Maya L. Groner, David James Páez, Alyssa-Lois M. Gehman
2026, Philosophical Transactions of the Royal Society, Series B (381)
Marine diseases can have far-reaching effects on population, community and ecosystem health; however, our ability to track, predict and manage these diseases has, historically, been poor. As a result, the fields of disease ecology and epidemiology have developed at a slower pace for marine than terrestrial systems [<a class="link link-ref...
Changing drivers of regional large magnitude avalanche frequency throughout Colorado, USA
Erich H. Peitzsch, Justin T. Martin, Ethan M. Greene, Nicolas Eckert, Adrien Favillier, Jason Konigsberg, Nickolas Kichas, Daniel K. Stahle, Karl W. Birkeland, Kelly Elder, Gregory T. Pederson
2026, Natural Hazards and Earth System Sciences (26) 1059-1074
Large magnitude snow avalanches (destructive size ≥ D3) impact settlements, transportation corridors, and public safety worldwide. In Colorado, United States, avalanches have killed more people than any other natural hazard since 1950. In March 2019, a large magnitude avalanche cycle occurred throughout the entire mountainous portion of Colorado resulting in more...
Evaluation of pathogen risks and testing considerations for Chinook salmon egg movements between New Zealand and California
Claire E. Couch, David B. Powell, Jan Lovy
2026, Open-File Report 2026-1065
Executive Summary Oncorhynchus tshawytscha (Walbaum in Artedi, 1792; Chinook salmon) were historically abundant in the McCloud River but are now extirpated from this tributary owing to dam construction and lack of passage. Planning efforts to restore populations above Shasta and Keswick Dams are currently underway, including an evaluation of potential source...
Stream sediment sources in Medicine Creek, northern Missouri and southern Iowa
Jessica D. Garrett
2026, Scientific Investigations Report 2026-5121
This report presents the results of a cooperative study by the U.S. Geological Survey and Missouri Department of Natural Resources to quantify sediment transport source contributions in the Medicine Creek drainage basin. Understanding relative source contributions provides valuable information for selecting the conservation practices that may be most effective in...
Efficacy of increased visual and olfactory cues for luring and trapping invasive tegu lizards
Amanda Marie Kissel, Kevin L. Donmoyer, Mark Robert Sandfoss, James C. Howard, Christina M. Romagosa, Amy A. Yackel Adams
2026, Frontiers in Amphibian and Reptile Science (4)
Controlling invasive wildlife species relies on the ability to efficiently remove individuals from the invaded environment. Thus, maximizing capture potential is of high interest, particularly for species that are difficult to capture. For invasive species such as the Argentine black and white tegu lizard (Salvator merianae), increasing...
Brewing change in the (glacier) percolation zone
Louis Sass, Christopher McNeil, Emily A. Baker, Zanden Arthur Frederick, Michael Loso
2026, Alaska Park Science (24) 2-15
Alaska's glaciers are losing mass at the fastest rate of any region globally, significantly affecting both the volume and distribution of water across the landscape. Though glaciers in the Alaska region (as defined by glaciologists this includes both Alaska and portions of adjacent Canada) range from sea level to nearly...
Abandonment of the Upper Devonian Greenland Gap Group and Scherr Formation and revision of the Upper Devonian Brallier and Foreknobs Formations in the central Valley and Ridge Province
Alan D. Pitts, Daniel H. Doctor
2026, Stratigraphy (23) 31-44
This study revises the lithostratigraphic framework of the Upper Devonian interval traditionally assigned to the Greenland Gap Group across the central Appalachian Valley and Ridge Province. The work aims to modernize and standardize lithostratigraphic nomenclature, establish a new reference section and demonstrate how the revised stratigraphy improves edge-matching of 1:24,000...
Hyperspectral retrieval of phytoplankton absorption and community composition from NASA’s PACE-OCI in estuarine–coastal waters using a hybrid framework combining mixture-of-experts and Variational Autoencoder
Xingyu Bai, Bingqing Liu, Jiang Li, Yuanheng Xiong, Eurico J. D'Sa, Melissa Millman Baustian, Xiaodong Zhang, Brice K. Grunert, Chisom O. Emeghiebo, Cassie Glasspie, Xu Yuan
2026, Remote Sensing of Environment (337)
Retrieving the phytoplankton absorption coefficient (aphy; m−1), one of the most spectrally rich inherent optical properties, remains challenging in optically complex coastal waters worldwide. Leveraging NASA's new hyperspectral mission, PACE, we introduce Hyper-MoE-VAE, a deep-learning architecture that integrates a Mixture-of-Experts with a Variational Autoencoder to retrieve high-dimensional aphy and subsequent estimation...
Extreme precipitation variability and soil texture controls on water-table response
Claudia R. Corona, Shemin Ge, Suzanne P. Anderson, Jesse E. Dickinson
2026, Water (18)
Extreme precipitation events (EPEs), a key class of hydrometeorological extremes, are intensifying globally under climate change; however, their effects on water-table dynamics across varying soil textures remain poorly understood. To better understand the impacts of EPEs, we conducted one-dimensional modeling to evaluate water-table response time, displacement, recession...
Reconstructing the Quaternary depositional history using geologic mapping and three-dimensional modeling of the subsurface near Fort Morgan, northeastern Colorado
Emily M. Taylor, Margaret E. Berry, Shannon A. Mahan, Jeremy C. Havens
2026, Scientific Investigations Report 2025-5052
Centered on Fort Morgan, Colorado, this study is intended to build from previous work by adding a three-dimensional (3D) view of the subsurface to better understand the depositional history of Quaternary deposits. A 1:100,000 scale geologic map was made by combining previous geologic maps, regional soil maps, and recent field...
Boxed in or branching out? Movement and resource selection of eastern box turtles (Terrapene carolina carolina) in an urban green space
Max D. Jones, Kenneth B. Ferebee, W. Mark Ford, Elizabeth Ann Hunter
2026, Urban Ecosystems (29)
The eastern box turtle (Terrapene carolina carolina) is a long-lived terrestrial turtle species distributed throughout the eastern United States that has experienced widespread population decline. Many eastern box turtle populations are persisting as remanent populations in small, fragmented urban green spaces. We investigated the movement and resource...
Erosion potential and flood vulnerability of streams and stream crossings at Acadia National Park, Maine
Ian P. Armstrong, Meghan A. McCallister, Kristina M. Hyslop, Adam J. Benthem
2026, Scientific Investigations Report 2026-5116
Acadia National Park has had increases in the frequency and magnitude of precipitation in recent years, leading to increased flood flows, stream erosion, and costly infrastructure damage. To improve infrastructure management in a changing climate, the U.S. Geological Survey, in cooperation with the National Park Service, has developed multiple datasets...
Methods for estimating selected streamflow statistics at ungaged sites in Wyoming based on data through water year 2021
Nicholas J. Taylor, Roy Sando
2026, Scientific Investigations Report 2026-5120
The U.S. Geological Survey, in cooperation with the Wyoming Water Development Office, developed regional regression equations based on basin characteristics and streamflow statistics for streamgages through water year 2021 (October 1, 2020, to September 30, 2021). The regression equations allow estimates of mean annual maximum, mean annual, mean seasonal, and...
Opportunities for the U.S. Geological Survey’s National Seismic Hazard Model to improve seismic risk assessment of critical infrastructure.
Kishor S. Jaiswal, N. Simon Kwong
2026, Earthquake Spectra Journal (42)
As fragility and risk modeling techniques and computational capabilities evolve, complemented by moving toward more routine and systematic seismic risk assessment of all buildings and critical infrastructure, the authors pose a few critical questions to investigate how the U.S. Geological Survey (USGS) National Seismic Hazard Models (NSHMs)...
Magnetic storms and geoelectric hazards
Jeffrey J. Love, Paul A. Bedrosian, Anna Kelbert, E. Joshua Rigler, Greg M. Lucas, Neesha R. Schnepf
2026, Annual Review of Earth and Planetary Sciences (54)
Magnetic storms induce geoelectric fields at Earth's surface that can interfere with grounded long-line systems. The September 1859 storm disrupted global telegraph operations, the March 1989 storm caused a blackout in Canada and interfered with electric-power-transmission systems in the United States, and...
Climate change and water quality influence on juvenile Atlantic sturgeon aggregation in the Altamaha River, Georgia
Maxwell Kleinhans, Nathan Nibbelink, Brian J. Irwin, Seth Wenger, Adam G. Fox
2026, Environmental Biology of Fishes (109)
In the summer, juvenile Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) are vulnerable to extreme water quality conditions (i.e., temperature, dissolved oxygen [DO], and salinity) in the estuaries they inhabit. The effects of climate change on Atlantic sturgeon are largely unknown, but it may exacerbate these water quality issues....