Data entry module and manuals for the Land Treatment Digital Library
Justin L. Welty, David S. Pilliod
2013, Data Series 749
Across the country, public land managers make decisions each year that influence landscapes and ecosystems within their jurisdictions. Many of these decisions involve vegetation manipulations, which often are referred to as land treatments. These treatments include removal or alteration of plant biomass, seeding of burned areas, application of herbicides, and...
U.S. Geological Survey Energy and Minerals science strategy: A resource lifecycle approach
Richard C. Ferrero, Jonathan J. Kolak, Donald J. Bills, Zachary H. Bowen, Daniel J. Cordier, Tanya J. Gallegos, James R. Hein, Karen D. Kelley, Philip H. Nelson, Vito F. Nuccio, Jeanine M. Schmidt, Robert R. Seal II
2013, Circular 1383-D
Executive SummaryThe economy, national security, and standard of living of the United States depend heavily on adequate and reliable supplies of energy and mineral resources. Based on population and consumption trends, the Nation’s use of energy and minerals can be expected to grow, driving the demand for ever broader scientific...
U.S. Geological Survey ecosystems science strategy—Advancing discovery and application through collaboration
Byron K. Williams, G. Lynn Wingard, Gary Brewer, James E. Cloern, Guy Gelfenbaum, Robert B. Jacobson, Jeffrey L. Kershner, Anthony D. McGuire, James D. Nichols, Carl D. Shapiro, Charles van Riper III, Robin P. White
2013, Circular 1383-C
Executive SummaryEcosystem science is critical to making informed decisions about natural resources that can sustain our Nation’s economic and environmental well-being. Resource managers and policymakers are faced with countless decisions each year at local, regional, and national levels on issues as diverse as renewable and nonrenewable energy development, agriculture, forestry,...
U.S. Geological Survey core science systems strategy: characterizing, synthesizing, and understanding the critical zone through a modular science framework
R. Sky Bristol, Ned H. Euliss Jr., Nathaniel L. Booth, Nina Burkardt, Jay E. Diffendorfer, Dean B. Gesch, Brian E. McCallum, David M. Miller, Suzette A. Morman, Barbara S. Poore, Richard P. Signell, Roland J. Viger
2013, Circular 1383-B
Executive SummaryCore Science Systems is a new mission of the U.S. Geological Survey (USGS) that resulted from the 2007 Science Strategy, “Facing Tomorrow’s Challenges: U.S. Geological Survey Science in the Decade 2007–2017.” This report describes the Core Science Systems vision and outlines a strategy to facilitate integrated characterization and understanding...
Mass-balance modeling of mineral weathering rates and CO2 consumption in the forested, metabasaltic Hauver Branch watershed, Catoctin Mountain, Maryland, USA
Karen C. Rice, Jason R. Price, David W. Szymanski
2013, Earth Surface Processes and Landforms (38) 859-875
Mineral weathering rates and a forest macronutrient uptake stoichiometry were determined for the forested, metabasaltic Hauver Branch watershed in north-central Maryland, USA. Previous studies of Hauver Branch have had an insufficient number of analytes to permit determination of rates of all the minerals involved in chemical weathering, including biomass. More...
Cumulative biological impacts framework for solar energy projects in the California Desert
Frank W. Davis, Jason R. Kreitler, Oliver Soong, David M. Stoms, Stephanie Dashiell, Lee Hannah, Whitney Wilkinson, John Dingman
2013, Report
This project developed analytical approaches, tools and geospatial data to support conservation planning for renewable energy development in the California deserts. Research focused on geographical analysis to avoid, minimize and mitigate the cumulative biological effects of utility-scale solar energy development. A hierarchical logic model was created to map the compatibility...
Landscape-scale evaluation of asymmetric interactions between Brown Trout and Brook Trout using two-species occupancy models
Tyler Wagner, Jefferson T. Deweber, Jason Detar, John A. Sweka
2013, Transactions of the American Fisheries Society (142) 353-361
Predicting the distribution of native stream fishes is fundamental to the management and conservation of many species. Modeling species distributions often consists of quantifying relationships between species occurrence and abundance data at known locations with environmental data at those locations. However, it is well documented that native stream fish distributions...
Between- and within-lake responses of macrophyte richness metrics to shoreline developmen
Marcus W. Beck, Bruce C. Vondracek, Lorin K. Hatch
2013, Lake and Reservoir Management (29) 179-193
Aquatic habitat in littoral environments can be affected by residential development of shoreline areas. We evaluated the relationship between macrophyte richness metrics and shoreline development to quantify indicator response at 2 spatial scales for Minnesota lakes. First, the response of total, submersed, and sensitive species to shoreline development was evaluated...
Estimating spatial and temporal components of variation in count data using negative binomial mixed models
Brian J. Irwin, Tyler Wagner, James R. Bence, Megan V. Kepler, Weihai Liu, Daniel B. Hayes
2013, Transactions of the American Fisheries Society (142) 171-183
Partitioning total variability into its component temporal and spatial sources is a powerful way to better understand time series and elucidate trends. The data available for such analyses of fish and other populations are usually nonnegative integer counts of the number of organisms, often dominated by many low values with...
Interactions among hydrogeomorphology, vegetation, and nutrient biogeochemistry in floodplain ecosystems
G. B. Noe
2013, Book chapter, Ecogeomorphology
Hydrogeomorphic, vegetative, and biogeochemical processes interact in floodplains resulting in great complexity that provides opportunities to better understand linkages among physical and biological processes in ecosystems. Floodplains and their associated river systems are structured by four dimensional gradients of hydrogeomorphology: longitudinal, lateral, vertical, and temporal components. These four dimensions create...
Mapping monkeypox transmission risk through time and space in the Congo Basin
Yoshinori J. Nakazawa, R. Ryan Lash, Darin S. Carroll, Inger K. Damon, Kevin L. Karem, Mary G. Reynolds, Jorge E. Osorio, Tonie E. Rocke, Jean Malekani, Jean-Jacques Muyembe, Pierre Formenty, A. Townsend Peterson
2013, PLoS ONE (8)
Monkeypox is a major public health concern in the Congo Basin area, with changing patterns of human case occurrences reported in recent years. Whether this trend results from better surveillance and detection methods, reduced proportions of vaccinated vs. non-vaccinated human populations, or changing environmental conditions remains unclear. Our objective is...
County-level analysis of the impact of temperature and population increases on California wildfire data
M. Baltar, Jon E. Keeley, F.P. Schoenberg
2013, Environmetrics (25) 397-405
The extent to which the apparent increase in wildfire incidence and burn area in California from 1990 to 2006 is affected by population and temperature increases is examined. Using generalized linear models with random effects, we focus on the estimated impacts of increases in mean daily temperatures and populations in...
ULFEM time series analysis package
Susan M. Karl, Darcy McPhee, Jonathan M. G. Glen, Simon L. Klemperer
2013, Open-File Report 2013-1285
This manual describes how to use the Ultra-Low-Frequency ElectroMagnetic (ULFEM) software package. Casual users can read the quick-start guide and will probably not need any more information than this. For users who may wish to modify the code, we provide further description of the routines....
Control on groundwater flow in a semiarid folded and faulted intermountain basin
Lyndsay B. Ball, Jonathan S. Caine, Shemin Ge
2013, Water Resources Research (50) 6788-6809
The major processes controlling groundwater flow in intermountain basins are poorly understood, particularly in basins underlain by folded and faulted bedrock and under regionally realistic hydrogeologic heterogeneity. To explore the role of hydrogeologic heterogeneity and poorly constrained mountain hydrologic conditions on regional groundwater flow in contracted intermountain basins, a series...
Geomorphic characterization of four shelf-sourced submarine canyons along the U.S. Mid-Atlantic continental margin
Jeffrey Obelcz, Daniel S. Brothers, Jason D. Chaytor, Uri S. ten Brink, Steve W. Ross, Sandra Brooke
2013, Deep-Sea Research Part II: Topical Studies in Oceanography (104) 106-119
Shelf-sourced submarine canyons are common features of continental margins and are fundamental to deep-sea sedimentary systems. Despite their geomorphic and geologic significance, relatively few passive margin shelf-breaching canyons worldwide have been mapped using modern geophysical methods. Between 2007 and 2012 a series of geophysical surveys was conducted across four major...
Comparison of elevation and remote sensing derived products as auxiliary data for climate surface interpolation
Otto Alvarez, Qinghua Guo, Robert C. Klinger, Wenkai Li, Paul Doherty
2013, International Journal of Climatology (34) 2258-2268
Climate models may be limited in their inferential use if they cannot be locally validated or do not account for spatial uncertainty. Much of the focus has gone into determining which interpolation method is best suited for creating gridded climate surfaces, which often a covariate such as elevation (Digital Elevation...
Modeling erosion of ice-rich permafrost bluffs along the Alaskan Beaufort Sea coast
Katherine R. Barnhart, Robert S. Anderson, Irina Overeem, Cameron Wobus, Gary D. Clow, Frank E. Urban
2013, Journal of Geophysical Research F: Earth Surface (119) 1155-1179
The Arctic climate is changing, inducing accelerating retreat of ice-rich permafrost coastal bluffs. Along Alaska’s Beaufort Sea coast, erosion rates have increased roughly threefold from 6.8 to 19 m yr−1 since 1955 while the sea ice-free season has increased roughly twofold from 45 to 100 days since 1979. We develop a numerical model...
Desert shrub responses to experimental modification of precipitation seasonality and soil depth: relationship to the two-layer model and ecohydrological niche
Matthew J. Germino, Keith Reinhardt
2013, Journal of Ecology (102) 989-997
1. Ecohydrological niches are important for understanding plant community responses to climate shifts, particularly in dry lands. According to the two-layer hypothesis, selective use of deep-soil water increases growth or persistence of woody species during warm and dry summer periods and thereby contributes to their coexistence with shallow-rooted herbs in...
Monitoring gray wolf populations using multiple survey methods
David E. Ausband, Lindsey N. Rich, Elizabeth M. Glenn, Michael S. Mitchell, Pete Zager, David A.W. Miller, Lisette P. Waits, Bruce B. Ackerman, Curt M. Mack
2013, Journal of Wildlife Management (78) 335-346
The behavioral patterns and large territories of large carnivores make them challenging to monitor. Occupancy modeling provides a framework for monitoring population dynamics and distribution of territorial carnivores. We combined data from hunter surveys, howling and sign surveys conducted at predicted wolf rendezvous sites, and locations of radiocollared wolves to...
Metallogenic belt and mineral deposit maps of northeast Asia
Alexander A. Obolenskiy (compiler), Sergey M. Rodionov, Gunchin Dejidmaa, Ochir Gerel, Duk-Hwan Hwang, Robert J. Miller, Warren J. Nokleberg, Masatsugu Ogasawara, Alexander P. Smelov, Hongquan Yan, Zhan V. Seminskiy
2013, Scientific Investigations Map 3022
This report contains explanatory material and summary tables for lode mineral deposits and placer districts (Map A, sheet 1) and metallogenic belts of Northeast Asia (Maps B, C, and D on sheets 2, 3, and 4, respectively). The map region includes eastern Siberia, southeastern Russia, Mongolia, northeast China, and Japan....
Drivers of circulation in a fringing coral reef embayment: A wave-flow coupled numerical modeling study of Hanalei Bay, Hawaii
Ron Hoeke, Curt D. Storlazzi, Peter V. Ridd
2013, Continental Shelf Research (58) 79-95
A coupled wave-circulation numerical model of Hanalei Bay, Hawaii, was constructed to investigate controls on nearshore hydrodynamics and overall circulation of a bathymetrically-complex coral reef embayment that is exposed to large waves and river floods several times per annum. The model was calibrated...
Effects of future urban and biofuel crop expansions on the riverine export of phosphorus to the Laurentian Great Lakes
Meredith B. LaBeau, Dale M. Robertson, Alex S. Mayer, Bryan C. Pijanowski, David A. Saad
2013, Ecological Modelling (277) 27-37
Increased phosphorus (P) loadings threaten the health of the world’s largest freshwater resource, the Laurentian Great Lakes (GL). To understand the linkages between land use and P delivery, we coupled two spatially explicit models, the landscape-scale SPARROW P fate and transport watershed model and the Land Transformation Model (LTM) land...
Modeling unsaturated zone flow and runoff processes by integrating MODFLOW-LGR and VSF, and creating the new CFL package
I. Borsia, R. Rossetto, C. Schifani, Mary C. Hill
2013, Journal of Hydrology (488) 33-47
In this paper two modifications to the MODFLOW code are presented. One concerns an extension of Local Grid Refinement (LGR) to Variable Saturated Flow process (VSF) capability. This modification allows the user to solve the 3D Richards’ equation only in selected parts of the model domain. The second modification introduces...
Spatiotemporal variation in range-wide Golden-cheeked Warbler habitat
Adam Duarte, Jennifer Jensen, Jeffrey S. Hatfield, Floyd Weckerly
2013, Ecosphere (4)
Habitat availability ultimately limits the distribution and abundance of wildlife species. Consequently, it is paramount to identify where wildlife habitat is and understand how it changes over time in order to implement large scale wildlife conservation plans. Yet, no work has quantified the degree of change in range-wide breeding habitat...
Development of CE-QUAL-W2 models for the Middle Fork Willamette and South Santiam Rivers, Oregon
Norman L. Buccola, Adam J. Stonewall, Annett B. Sullivan, Yoonhee Kim, Stewart A. Rounds
2013, Open-File Report 2013-1186
Hydrodynamic (CE-QUAL-W2) models of Hills Creek Lake (HCL), Lookout Point Lake (LOP), and Dexter Lake (DEX) on the Middle Fork Willamette River (MFWR), and models of Green Peter Lake and Foster Lake on the South Santiam River systems in western Oregon were updated and recalibrated for a wide range of...