Approaches to setting organism-based ballast water discharge standards
Henry Lee II, Deborah A. Reusser, Melanie Frazier
2013, Ecological Applications (23) 301-310
As a vector by which foreign species invade coastal and freshwater waterbodies, ballast water discharge from ships is recognized as a major environmental threat. The International Maritime Organization (IMO) drafted an international treaty establishing ballast water discharge standards based on the number of viable organisms per volume of ballast discharge...
Mapping spatial resources with GPS animal telemetry: foraging manatees locate seagrass beds in the Ten Thousand Islands, Florida, USA
Daniel H. Slone, James P. Reid, W. Judson Kenworthy
2013, Marine Ecology Progress Series (476) 285-299
Turbid water conditions make the delineation and characterization of benthic habitats difficult by traditional in situ and remote sensing methods. Here, we develop and validate modeling and sampling methodology for detecting and characterizing seagrass beds by analyzing GPS telemetry records from radio-tagged manatees. Between October 2002 and October 2005, 14...
Rapid microsatellite marker development using next generation pyrosequencing to inform invasive Burmese python -- Python molurus bivittatus -- management
Margaret E. Hunter, Kristen M. Hart
2013, International Journal of Molecular Sciences (14) 4793-4804
Invasive species represent an increasing threat to native ecosystems, harming indigenous taxa through predation, habitat modification, cross-species hybridization and alteration of ecosystem processes. Additionally, high economic costs are associated with environmental damage, restoration and control measures. The Burmese python, Python molurus bivittatus, is one of the most notable invasive species...
Inhibition of bacterial oxidation of ferrous iron by lead nitrate in sulfate-rich systems
Hongmei Wang, Linfeng Gong, Charles A. Cravotta III,, Xiaofen Yang, Olli H. Tuovinen, Hailiang Dong, Xiang Fu
2013, Journal of Hazardous Materials (244-245) 718-725
Inhibition of bacterial oxidation of ferrous iron (Fe(II)) by Pb(NO3)2 was investigated with a mixed culture of Acidithiobacillus ferrooxidans. The culture was incubated at 30 °C in ferrous-sulfate medium amended with 0–24.2 mM Pb(II) added as Pb(NO3)2. Anglesite (PbSO4) precipitated immediately upon Pb addition and was the only solid phase...
Geology, sequence stratigraphy, and oil and gas assessment of the Lewis Shale Total Petroleum System, San Juan Basin, New Mexico and Colorado: Chapter 5 in Total petroleum systems and geologic assessment of undiscovered oil and gas resources in the San Juan Basin Province, exclusive of Paleozoic rocks, New Mexico and Colorado
R. F. Dubiel
2013, Data Series 69-F-5
The Lewis Shale Total Petroleum System (TPS) in the San Juan Basin Province contains a continuous gas accumulation in three distinct stratigraphic units deposited in genetically related depositional environments: offshore-marine shales, mudstones, siltstones, and sandstones of the Lewis Shale, and marginal-marine shoreface sandstones and siltstones of both the La Ventana...
Flood-inundation maps for the White River at Spencer, Indiana
Elizabeth A. Nystrom
2013, Scientific Investigations Map 3251
Digital flood-inundation maps for a 5.3-mile reach of the White River at Spencer, Indiana, were created by the U.S. Geological Survey (USGS) in cooperation with the Indiana Office of Community and Rural Affairs. The inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at...
CRT--Cascade Routing Tool to define and visualize flow paths for grid-based watershed models
Wesley R. Henson, Rose L. Medina, C. Justin Mayers, Richard G. Niswonger, R.S. Regan
2013, Techniques and Methods 6-D2
The U.S. Geological Survey Cascade Routing Tool (CRT) is a computer application for watershed models that include the coupled Groundwater and Surface-water FLOW model, GSFLOW, and the Precipitation-Runoff Modeling System (PRMS). CRT generates output to define cascading surface and shallow subsurface flow paths for grid-based model domains. CRT requires a...
Fort Collins Science Center Ecosystem Dynamics branch--interdisciplinary research for addressing complex natural resource issues across landscapes and time
Zachary H. Bowen, Cynthia P. Melcher, Juliette T. Wilson
2013, Fact Sheet 2013-3009
The Ecosystem Dynamics Branch of the Fort Collins Science Center offers an interdisciplinary team of talented and creative scientists with expertise in biology, botany, ecology, geology, biogeochemistry, physical sciences, geographic information systems, and remote-sensing, for tackling complex questions about natural resources. As demand for natural resources increases, the issues facing...
Estimating hydraulic properties from tidal attenuation in the Northern Guam Lens Aquifer, territory of Guam, USA
Kolja Rotzoll, Stephen B. Gingerich, John W. Jenson, Aly I. El-Kadi
2013, Hydrogeology Journal (21) 643-654
Tidal-signal attenuations are analyzed to compute hydraulic diffusivities and estimate regional hydraulic conductivities of the Northern Guam Lens Aquifer, Territory of Guam (Pacific Ocean), USA. The results indicate a significant tidal-damping effect at the coastal boundary. Hydraulic diffusivities computed using a simple analytical solution for well responses to tidal forcings...
Managing the effects of endocrine disrupting chemicals in wastewater-impacted streams
Paul M. Bradley, Dana W. Kolpin
2013, Book chapter, Current perspectives in contaminant hydrology and water resources sustainability
A revolution in analytical instrumentation circa 1920 greatly improved the ability to characterize chemical substances. This analytical foundation resulted in an unprecedented explosion in the design and production of synthetic chemicals during and post-World War II. What is now often referred to as the 2nd Chemical Revolution has provided substantial...
Electrical signatures of ethanol-liquid mixtures: implications for monitoring biofuels migration in the subsurface
Yves Robert Personna, Lee Slater, Dimitrios Ntarlagiannis, Dale D. Werkema, Zoltan Szabo
2013, Journal of Contaminant Hydrology (144) 99-107
Ethanol (EtOH), an emerging contaminant with potential direct and indirect environmental effects, poses threats to water supplies when spilled in large volumes. A series of experiments was directed at understanding the electrical geophysical signatures arising from groundwater contamination by ethanol. Conductivity measurements were performed at the laboratory scale on EtOH–water...
Elevated CO2 does not offset greater water stress predicted under climate change for native and exotic riparian plants
Laura G. Perry, Patrick B. Shafroth, Dana M. Blumenthal, Jack A. Morgan, Daniel R. LeCain
2013, New Phytologist (197) 532-543
In semiarid western North American riparian ecosystems, increased drought and lower streamflows under climate change may reduce plant growth and recruitment, and favor drought‐tolerant exotic species over mesic native species. We tested whether elevated atmospheric CO2 might ameliorate these effects by improving plant water‐use efficiency.We examined the effects of CO2 and...
Demographic patterns in the peacock grouper (Cephalopholis argus), an introduced Hawaiian reef fish
Mary K. Donovan, Alan M. Friedlander, Edward E. DeMartini, Megan J. Donahue, Ivor D. Williams
2013, Environmental Biology of Fishes (96) 981-994
This study took advantage of a unique opportunity to collect large sample sizes of a coral reef fish species across a range of physical and biological features of the Hawaiian Archipelago to investigate variability in the demography of an invasive predatory coral reef fish, Cephalopholis argus (Family: Epinephelidae). Age-based demographic...
Modeling the long-term fate of agricultural nitrate in groundwater in the San Joaquin Valley, California
Francis H. Chapelle, Bruce G. Campbell, Mark A. Widdowson, Mathew K. Landon
2013, Book chapter, Current perspectives in contaminant hydrology and water resources sustainability
Nitrate contamination of groundwater systems used for human water supplies is a major environmental problem in many parts of the world. Fertilizers containing a variety of reduced nitrogen compounds are commonly added to soils to increase agricultural yields. But the amount of nitrogen added during fertilization typically exceeds the amount...
Paleomagnetic correlation and ages of basalt flow groups in coreholes at and near the Naval Reactors Facility, Idaho National Laboratory, Idaho
Duane E. Champion, Linda C. Davis, Mary K.V. Hodges, Marvin A. Lanphere
2013, Scientific Investigations Report 2013-5012
Paleomagnetic inclination and polarity studies were conducted on subcore samples from eight coreholes located at and near the Naval Reactors Facility (NRF), Idaho National Laboratory (INL). These studies were used to characterize and to correlate successive stratigraphic basalt flow groups in each corehole to basalt flow groups with similar paleomagnetic...
Biology and impacts of Pacific island invasive species 9. Capra hircus, the feral goat, (Mammalia: Bovidae)
Mark W. Chynoweth, Creighton M. Litton, Christopher A. Lepczyk, Steve A. Hess, Susan Cordell
2013, Pacific Science (67) 141-156
Domestic goats, Capra hircus, were intentionally introduced to numerous oceanic islands beginning in the sixteenth century. The remarkable ability of C. hircus to survive in a variety of conditions has enabled this animal to become feral and impact native ecosystems on islands throughout the world. Direct ecological impacts include consumption...
Flood-inundation maps for the Iroquois River at Rensselaer, Indiana
Kathleen K. Fowler, Aubrey R. Bunch
2013, Scientific Investigations Map 3246
Digital flood-inundation maps for a 4.0-mile reach of the Iroquois River at Rensselaer, Indiana (Ind.), were created by the U.S. Geological Survey (USGS) in cooperation with the Indiana Department of Transportation. The inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation/, depict...
Characterizing particle-scale equilibrium adsorption and kinetics of uranium(VI) desorption from U-contaminated sediments
Deborah L. Stoliker, Chongxuan Liu, Douglas B. Kent, John M. Zachara
2013, Water Resources Research (49) 1163-1177
Rates of U(VI) release from individual dry-sieved size fractions of a field-aggregated, field-contaminated composite sediment from the seasonally saturated lower vadose zone of the Hanford 300-Area were examined in flow-through reactors to maintain quasi-constant chemical conditions. The principal source of variability in equilibrium U(VI) adsorption properties of the various size...
Assessment of mercury and methylmercury in water, sediment, and biota in Sulphur Creek in the vicinity of the Clyde Gold Mine and the Elgin Mercury Mine, Colusa County, California
Roger L. Hothem, James J. Rytuba, Brianne E. Brussee, Daniel N. Goldstein
2013, Open-File Report 2013-1056
At the request of the U.S. Bureau of Land Management, we performed a study during April–July 2010 to characterize mercury (Hg), monomethyl mercury (MMeHg), and other geochemical constituents in sediment, water, and biota at the Clyde Gold Mine and the Elgin Mercury Mine, located in neighboring subwatersheds of Sulphur Creek,...
Macroscopic, histologic, and ultrastructural lesions associated with avian keratin disorder in Black-capped Chickadees (Poecile atricapillus)
Caroline R. Van Hemert, A. G. Armién, J.E. Blake, Colleen M. Handel, T. M. O'Hara
2013, Veterinary Pathology (50) 500-513
An epizootic of beak abnormalities (avian keratin disorder) was recently detected among wild birds in Alaska. Here we describe the gross, histologic, and ultrastructural features of the disease in 30 affected adult black-capped chickadees (Poecile atricapillus). Grossly, there was elongation of the rhamphotheca, with varying degrees of lateral deviation, crossing,...
Representation of ecological systems within the protected areas network of the continental United States
Jocelyn L. Aycrigg, Anne Davidson, Leona K. Svancara, Kevin J. Gergely, Alexa McKerrow, J. Michael Scott
2013, PLoS ONE (8)
If conservation of biodiversity is the goal, then the protected areas network of the continental US may be one of our best conservation tools for safeguarding ecological systems (i.e., vegetation communities). We evaluated representation of ecological systems in the current protected areas network and found insufficient representation at three vegetation...
Balancing practicality and hydrologic realism: a parsimonious approach for simulating rapid groundwater recharge via unsaturated-zone preferential flow
Benjamin B. Mirus, J. R. Nimmo
2013, Water Resources Research (49) 1458-1465
The impact of preferential flow on recharge and contaminant transport poses a considerable challenge to water-resources management. Typical hydrologic models require extensive site characterization, but can underestimate fluxes when preferential flow is significant. A recently developed source-responsive model incorporates film-flow theory with conservation of mass to estimate unsaturated-zone preferential fluxes...
Exotic plant colonization and occupancy within riparian areas of the Interior Columbia River and Upper Missouri River basins, USA
Robert K. Al-Chokhachy, Andrew M. Ray, Brett B. Roper, Eric Archer
2013, Wetlands (33) 409-420
Exotic plant invasions into riparia often result in shifts in vegetative composition, altered stream function, and cascading effects to biota at multiple scales. Characterizing the distribution patterns of exotic plants is an important step in directing targeted research to identify mechanisms of invasion and potential management strategies. In this study,...
Local-area-enhanced, 2.5-meter resolution natural-color and color-infrared satellite-image mosaics of the Nuristan mineral district in Afghanistan
Philip A. Davis, Laura E. Cagney, Scott A. Arko, Michelle L. Harbin
Philip A. Davis, editor(s)
2013, Data Series 709-X
The U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Defense Task Force for Business and Stability Operations, prepared databases for mineral-resource target areas in Afghanistan. The purpose of the databases is to (1) provide useful data to ground-survey crews for use in performing detailed assessments of the...
Explaining local-scale species distributions: relative contributions of spatial autocorrelation and landscape heterogeneity for an avian assemblage
Brady J. Mattsson, Elise F. Zipkin, Beth Gardner, Peter J. Blank, John R. Sauer, J. Andrew Royle
2013, PLoS ONE (8)
Understanding interactions between mobile species distributions and landcover characteristics remains an outstanding challenge in ecology. Multiple factors could explain species distributions including endogenous evolutionary traits leading to conspecific clustering and endogenous habitat features that support life history requirements. Birds are a useful taxon for examining hypotheses about the relative importance...